Franck Vazquez

Summary

Affiliation: University of Basel
Country: Switzerland

Publications

  1. pmc Introns of plant pri-miRNAs enhance miRNA biogenesis
    Dawid Bielewicz
    Department of Gene Expression, Faculty of Biology, Adam Mickiewicz University, Umultowska Street 89, 61 614 Poznan, Poland
    EMBO Rep 14:622-8. 2013
  2. pmc Transcript mapping of Cotton leaf curl Burewala virus and its cognate betasatellite, Cotton leaf curl Multan betasatellite
    Fazal Akbar
    Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Jhang Road, Faisalabad, Pakistan
    Virol J 9:249. 2012
  3. pmc Evolution of Arabidopsis MIR genes generates novel microRNA classes
    Franck Vazquez
    Friedrich Miescher Institute for Biomedical Research, Novartis Research Foundation, Maulbeerstrasse 66, 4058 Basel, Switzerland
    Nucleic Acids Res 36:6429-38. 2008
  4. doi request reprint The biosynthetic pathways and biological scopes of plant small RNAs
    Franck Vazquez
    Botanical Institute Basel, University of Basel, Zurich Basel Plant Science Center, Schönbeinstrasse 6, CH 4056 Basel, Switzerland
    Trends Plant Sci 15:337-45. 2010
  5. pmc Primary and secondary siRNAs in geminivirus-induced gene silencing
    Michael Aregger
    Institute of Botany, University of Basel, Basel, Switzerland
    PLoS Pathog 8:e1002941. 2012
  6. doi request reprint Role of microRNAs and other sRNAs of plants in their changing environments
    Katarzyna Kruszka
    Department of Gene Expression, Adam Mickiewicz University, Poznan, Poland
    J Plant Physiol 169:1664-72. 2012
  7. pmc Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing
    Todd Blevins
    Institute of Botany, University of Basel, Schönbeinstrasse 6, 4056 Basel, Switzerland
    Nucleic Acids Res 34:6233-46. 2006
  8. pmc miR393 and secondary siRNAs regulate expression of the TIR1/AFB2 auxin receptor clade and auxin-related development of Arabidopsis leaves
    Azeddine Si-Ammour
    Friedrich Miescher Institute for Biomedical Research, Novartis Research Foundation, 4058 Basel, Switzerland
    Plant Physiol 157:683-91. 2011
  9. pmc Specific impact of tobamovirus infection on the Arabidopsis small RNA profile
    Quanan Hu
    Botanical Institute, Department of Plant Physiology, Zurich Basel Plant Science Center, University of Basel, Basel, Switzerland
    PLoS ONE 6:e19549. 2011
  10. pmc miR393 is required for production of proper auxin signalling outputs
    David Windels
    Department of Environmental Sciences, Section of Plant Physiology, University of Basel, Zurich Basel Plant Science Center, Part of the Swiss Plant Science Web, Basel, Switzerland
    PLoS ONE 9:e95972. 2014

Collaborators

Detail Information

Publications14

  1. pmc Introns of plant pri-miRNAs enhance miRNA biogenesis
    Dawid Bielewicz
    Department of Gene Expression, Faculty of Biology, Adam Mickiewicz University, Umultowska Street 89, 61 614 Poznan, Poland
    EMBO Rep 14:622-8. 2013
    ..Our findings are biologically significant as the presence of functional splice sites in the MIR163 gene appears mandatory for pathogen-triggered accumulation of miR163 and proper regulation of at least one of its targets. ..
  2. pmc Transcript mapping of Cotton leaf curl Burewala virus and its cognate betasatellite, Cotton leaf curl Multan betasatellite
    Fazal Akbar
    Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Jhang Road, Faisalabad, Pakistan
    Virol J 9:249. 2012
    ..The study described has investigated whether the recombination/mutation events involved in the evolution of CLCuBuV and its associated CLCuMuB have affected their transcription strategies...
  3. pmc Evolution of Arabidopsis MIR genes generates novel microRNA classes
    Franck Vazquez
    Friedrich Miescher Institute for Biomedical Research, Novartis Research Foundation, Maulbeerstrasse 66, 4058 Basel, Switzerland
    Nucleic Acids Res 36:6429-38. 2008
    ..Our results suggest that evolution of MIR genes is associated with gradual, overlapping changes in DCL usage resulting in specific size classes of miRNAs...
  4. doi request reprint The biosynthetic pathways and biological scopes of plant small RNAs
    Franck Vazquez
    Botanical Institute Basel, University of Basel, Zurich Basel Plant Science Center, Schönbeinstrasse 6, CH 4056 Basel, Switzerland
    Trends Plant Sci 15:337-45. 2010
    ..In this review, we integrate these studies to provide updated views on the biosynthetic pathways and dedicated functions of the endogenous sRNA classes of plants, emphasizing their specialized scopes...
  5. pmc Primary and secondary siRNAs in geminivirus-induced gene silencing
    Michael Aregger
    Institute of Botany, University of Basel, Basel, Switzerland
    PLoS Pathog 8:e1002941. 2012
    ..Unlike transgenic mRNA, geminiviral mRNAs appear to be poor templates for RDR-dependent production of secondary siRNAs...
  6. doi request reprint Role of microRNAs and other sRNAs of plants in their changing environments
    Katarzyna Kruszka
    Department of Gene Expression, Adam Mickiewicz University, Poznan, Poland
    J Plant Physiol 169:1664-72. 2012
    ..It is not yet clear how these different signals and responses are integrated in nature. In the present review, we summarize current knowledge on sRNA-mediated responses to stress, and highlight possible directions of future research...
  7. pmc Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing
    Todd Blevins
    Institute of Botany, University of Basel, Schönbeinstrasse 6, 4056 Basel, Switzerland
    Nucleic Acids Res 34:6233-46. 2006
    ..Our work highlights the complexity of virus interaction with host silencing pathways and suggests that DCL multiplicity helps mediate plant responses to diverse viral infections...
  8. pmc miR393 and secondary siRNAs regulate expression of the TIR1/AFB2 auxin receptor clade and auxin-related development of Arabidopsis leaves
    Azeddine Si-Ammour
    Friedrich Miescher Institute for Biomedical Research, Novartis Research Foundation, 4058 Basel, Switzerland
    Plant Physiol 157:683-91. 2011
    ..Thus, miR393 and possibly siTAARs regulate auxin perception and certain auxin-related aspects of leaf development...
  9. pmc Specific impact of tobamovirus infection on the Arabidopsis small RNA profile
    Quanan Hu
    Botanical Institute, Department of Plant Physiology, Zurich Basel Plant Science Center, University of Basel, Basel, Switzerland
    PLoS ONE 6:e19549. 2011
    ..These complexes may sequester viral and host sRNAs to engage them in yet unknown mechanisms involved in plant:virus interactions...
  10. pmc miR393 is required for production of proper auxin signalling outputs
    David Windels
    Department of Environmental Sciences, Section of Plant Physiology, University of Basel, Zurich Basel Plant Science Center, Part of the Swiss Plant Science Web, Basel, Switzerland
    PLoS ONE 9:e95972. 2014
    ..Altogether our experiments provide an additional highlight of the complexity of auxin signaling homeostasis and show that miR393 is an important component of this homeostasis. ..
  11. doi request reprint RNA silencing pathways of plants: silencing and its suppression by plant DNA viruses
    Thomas Hohn
    Institute of Botany, University of Basel, Basel, Switzerland
    Biochim Biophys Acta 1809:588-600. 2011
    ..This article is part of a Special Issue entitled: MicroRNA's in viral gene regulation...
  12. pmc miR393: integrator of environmental cues in auxin signaling?
    David Windels
    Botanical Institute, University of Basel, Zurich Basel Plant Science Center, Basel, Switzerland
    Plant Signal Behav 6:1672-5. 2011
    ..The known roles of miR393 in nitrate response, in defence against pathogenic bacteria and in plant development lead us to hypothesize that miR393 plays an important role to integrate complex environmental stimuli.  ..
  13. ncbi request reprint Arabidopsis endogenous small RNAs: highways and byways
    Franck Vazquez
    Friedrich Miescher Institute for Biomedical Research, Novartis Research Foundation, Maulbeerstrasse 66, CH 4058 Basel, Switzerland
    Trends Plant Sci 11:460-8. 2006
    ..Moreover, several experimental results indicate redundancies among double-strand RNA binding proteins and ARGONAUTE proteins, which probably create a complex network of small RNA pathways...