Samuel Cordey

Summary

Affiliation: University Hospital
Country: Switzerland

Publications

  1. pmc Pilot Evaluation of RT-PCR/Electrospray Ionization Mass Spectrometry (PLEX-ID/Flu assay) on Influenza-Positive Specimens
    Samuel Cordey
    Swiss National Reference Centre for Emerging Viral Diseases, University of Geneva Hospitals, Geneva, Switzerland
    Open Virol J 6:64-7. 2012
  2. pmc Identification of site-specific adaptations conferring increased neural cell tropism during human enterovirus 71 infection
    Samuel Cordey
    Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University Hospitals of Geneva, Geneva, Switzerland
    PLoS Pathog 8:e1002826. 2012
  3. doi request reprint Analytical validation of a lymphocytic choriomeningitis virus real-time RT-PCR assay
    Samuel Cordey
    Swiss National Reference Centre for Emerging Viral Diseases, University of Geneva Hospitals, Geneva, Switzerland
    J Virol Methods 177:118-22. 2011
  4. pmc The cis-acting replication elements define human enterovirus and rhinovirus species
    Samuel Cordey
    Central Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, 1211 Geneva 14, Switzerland
    RNA 14:1568-78. 2008
  5. doi request reprint Simultaneous detection of parainfluenza viruses 1 and 3 by real-time reverse transcription-polymerase chain reaction
    Samuel Cordey
    Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, 24 Rue Micheli du Crest, 1211 Geneva 14, Switzerland
    J Virol Methods 156:166-8. 2009
  6. pmc Rhinovirus genome evolution during experimental human infection
    Samuel Cordey
    Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University of Geneva Hospitals, Geneva, Switzerland
    PLoS ONE 5:e10588. 2010
  7. pmc Rhinovirus genome variation during chronic upper and lower respiratory tract infections
    Caroline Tapparel
    Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University of Geneva Hospitals, Geneva, Switzerland
    PLoS ONE 6:e21163. 2011
  8. pmc New molecular detection tools adapted to emerging rhinoviruses and enteroviruses
    Caroline Tapparel
    Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, 24 Rue Micheli du Crest, 1211 Geneva 14, Switzerland
    J Clin Microbiol 47:1742-9. 2009
  9. pmc New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses
    Caroline Tapparel
    University of Geneva Hospitals, Switzerland
    Emerg Infect Dis 15:719-26. 2009
  10. pmc New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features
    Caroline Tapparel
    Central Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, Geneva, Switzerland
    BMC Genomics 8:224. 2007

Collaborators

Detail Information

Publications14

  1. pmc Pilot Evaluation of RT-PCR/Electrospray Ionization Mass Spectrometry (PLEX-ID/Flu assay) on Influenza-Positive Specimens
    Samuel Cordey
    Swiss National Reference Centre for Emerging Viral Diseases, University of Geneva Hospitals, Geneva, Switzerland
    Open Virol J 6:64-7. 2012
    ....
  2. pmc Identification of site-specific adaptations conferring increased neural cell tropism during human enterovirus 71 infection
    Samuel Cordey
    Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University Hospitals of Geneva, Geneva, Switzerland
    PLoS Pathog 8:e1002826. 2012
    ..Taken together, our results show that the VP1 BC loop region of EV71 plays a critical role in cell tropism independent of EV71 lineage and, thus, may have contributed to dissemination and neurotropism in the immunocompromised patient...
  3. doi request reprint Analytical validation of a lymphocytic choriomeningitis virus real-time RT-PCR assay
    Samuel Cordey
    Swiss National Reference Centre for Emerging Viral Diseases, University of Geneva Hospitals, Geneva, Switzerland
    J Virol Methods 177:118-22. 2011
    ..This study validates a specific and sensitive real-time RT-PCR assay for the diagnosis of LCMV infections. Results showed that LCMV infections are extremely rare in hospitalized patients western in Switzerland...
  4. pmc The cis-acting replication elements define human enterovirus and rhinovirus species
    Samuel Cordey
    Central Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, 1211 Geneva 14, Switzerland
    RNA 14:1568-78. 2008
    ..Therefore, we propose that cre element could be considered as an additional criterion for human rhinovirus and enterovirus classification...
  5. doi request reprint Simultaneous detection of parainfluenza viruses 1 and 3 by real-time reverse transcription-polymerase chain reaction
    Samuel Cordey
    Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, 24 Rue Micheli du Crest, 1211 Geneva 14, Switzerland
    J Virol Methods 156:166-8. 2009
    ..The HPIV-1+3 combination constitutes a more rapid, more sensitive, and less expensive alternative than classical or multiplex real-time RT-PCR assays usually used in clinical laboratories...
  6. pmc Rhinovirus genome evolution during experimental human infection
    Samuel Cordey
    Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University of Geneva Hospitals, Geneva, Switzerland
    PLoS ONE 5:e10588. 2010
    ..In vivo, HRV generate new variants rapidly during the course of an acute infection due to mutations that accumulate in hot spot regions located at the capsid level, as well as in 2C and 3C genes...
  7. pmc Rhinovirus genome variation during chronic upper and lower respiratory tract infections
    Caroline Tapparel
    Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University of Geneva Hospitals, Geneva, Switzerland
    PLoS ONE 6:e21163. 2011
    ....
  8. pmc New molecular detection tools adapted to emerging rhinoviruses and enteroviruses
    Caroline Tapparel
    Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, 24 Rue Micheli du Crest, 1211 Geneva 14, Switzerland
    J Clin Microbiol 47:1742-9. 2009
    ..This investigation provides a comprehensive toolbox for accurate molecular identification of the different HEV and HRV circulating in humans...
  9. pmc New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses
    Caroline Tapparel
    University of Geneva Hospitals, Switzerland
    Emerg Infect Dis 15:719-26. 2009
    ..This study clarifies the diversity and explains the reasons for evolution of these viruses...
  10. pmc New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features
    Caroline Tapparel
    Central Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, Geneva, Switzerland
    BMC Genomics 8:224. 2007
    ..The lack of HRV full-length genome sequences and the absence of analysis comparing picornaviruses at the whole genome level limit our knowledge of the genomic features supporting these differences...
  11. pmc T lymphocytes promote the antiviral and inflammatory responses of airway epithelial cells
    Lan Jornot
    Division of Pulmonary Medicine, Geneva University Hospitals, Geneva, Switzerland
    PLoS ONE 6:e26293. 2011
    ..T cells modulate the antiviral and inflammatory responses of airway epithelial cells to human rhinoviruses (HRV)...
  12. ncbi request reprint Further characterization of a paramyxovirus transcription initiation signal: search for required nucleotides upstream and importance of the N phase context
    Samuel Cordey
    Department of Microbiology and Molecular Medicine, University of Geneva Medical School, CMU, 1 rue Michel Servet, CH 1211 Geneva 4, Switzerland
    J Gen Virol 88:1555-64. 2007
    ..In contrast, it was observed that changing the gs1 N phase context progressively decreased transcription by five- to tenfold. These results are discussed in relation to two different mechanisms of transcription initiation...
  13. ncbi request reprint Transcribing paramyxovirus RNA polymerase engages the template at its 3' extremity
    Samuel Cordey
    Department of Microbiology and Molecular Medicine, University of Geneva Medical School, CMU, 1 rue Michel Servet, CH 1211 Geneva 4, Switzerland
    J Gen Virol 87:665-72. 2006
    ..Implication of this observation for the nature of the Sendai virus RNA polymerase and for the mechanism by which it synthesizes mRNAs or replication products is presented...
  14. ncbi request reprint Nature of a paramyxovirus replication promoter influences a nearby transcription signal
    Diane Vulliémoz
    Department of Microbiology and Molecular Medicine, University of Geneva Medical School, CMU, 1 rue Michel Servet, CH 1211 Geneva 4, Switzerland
    J Gen Virol 86:171-80. 2005
    ..The manner in which transcription and replication initiations influence each other is discussed...