Affiliation: Swiss Institute of Bioinformatics
- Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and supportHeinz Stockinger
SIB Swiss Institute of Bioinformatics, CH 1015 Lausanne, Switzerland
Nucleic Acids Res 42:W436-41. 2014..org, SIB's Bioinformatics Resource Portal. This article provides an overview of the scientific and training resources SIB has consistently been offering to the life science community for more than 15 years. ..
- ExPASy: SIB bioinformatics resource portalPanu Artimo
Vital IT Group, SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland
Nucleic Acids Res 40:W597-603. 2012..The portal is aimed for both expert users and people who are not familiar with a specific domain in life sciences. The new web interface provides, in particular, visual guidance for newcomers to ExPASy...
- Experience using web services for biological sequence analysisHeinz Stockinger
Swiss Institute of Bioinformatics, Vital IT Group, Lausanne, Switzerland
Brief Bioinform 9:493-505. 2008..We briefly review main technological approaches as well as best practice hints that are useful for both users and developers. Finally, syntactic and semantic data integration issues with multiple web services are discussed...
- Selectome update: quality control and computational improvements to a database of positive selectionSebastien Moretti
Department of Ecology and Evolution, Biophore, University of Lausanne, CH 1015 Lausanne, Switzerland, Evolutionary Bioinformatics Group, SIB Swiss Institute of Bioinformatics, CH 1015 Lausanne, Switzerland, Vital IT Group, SIB Swiss Institute of Bioinformatics, CH 1015 Lausanne, Switzerland, Computational Phylogenetics group, SIB Swiss Institute of Bioinformatics, CH 1015 Lausanne, Switzerland, Division of Biosciences, Institute of Structural and Molecular Biology, University College London, Gower Street, London, WC1E 6BT, UK and Swiss National Supercomputing Centre CSCS, CH 6900, Lugano, Switzerland
Nucleic Acids Res 42:D917-21. 2014..A total of 6810 gene trees have some evidence of positive selection. Finally, the web interface has been improved to be more responsive and to facilitate searches and browsing. ..
- gcodeml: a Grid-enabled tool for detecting positive selection in biological evolutionSebastien Moretti
Department of Ecology and Evolution, University of Lausanne and SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland
Stud Health Technol Inform 175:59-68. 2012..Although we report on results for gcodeml, our approach is applicable and customisable to related problems in biology or other scientific domains...