Patricia M Palagi

Summary

Affiliation: Swiss Institute of Bioinformatics
Country: Switzerland

Publications

  1. ncbi request reprint MSight: an image analysis software for liquid chromatography-mass spectrometry
    Patricia M Palagi
    Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland
    Proteomics 5:2381-4. 2005
  2. ncbi request reprint Proteome informatics I: bioinformatics tools for processing experimental data
    Patricia M Palagi
    Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland
    Proteomics 6:5435-44. 2006
  3. doi request reprint A suite of tools to analyse and publish 2-DE data
    Christine Hoogland
    Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland
    Proteomics 8:4907-9. 2008
  4. ncbi request reprint SPS' Digest: the Swiss Proteomics Society selection of proteomics articles
    Christine Hoogland
    Swiss Institute of Bioinformatics, CMU, I Michel Servet, CH 1211 Geneva, Switzerland
    Proteomics 5:3045-7. 2005
  5. doi request reprint Database interrogation algorithms for identification of proteins in proteomic separations
    Patricia M Palagi
    Swiss Institute of Bioinformatics, CMU 1, 1 rue Michel Servet, CH 1211, Geneva 4, Switzerland
    Methods Mol Biol 519:515-31. 2009
  6. doi request reprint LC/MS data processing for label-free quantitative analysis
    Patricia M Palagi
    Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland
    Methods Mol Biol 696:369-77. 2011
  7. doi request reprint Calmodulin expression distinguishes the smooth muscle cell population of human carotid plaque
    Matteo Coen
    Department of Pathology and Immunology, Faculty of Medicine, University of Geneva, Geneva, Switzerland
    Am J Pathol 183:996-1009. 2013
  8. ncbi request reprint Promoting proteomics knowledge in Europe: report on the activities of the EuPA Education Committee 2006-2007
    Juan Pablo Albar
    ProteoRed, Centro Nacional de Biotecnologia, Madrid, Spain
    Proteomics 7:90-4. 2007
  9. doi request reprint The Swiss Proteomics Society (SPS) was one of the first European associations to be created in the field of proteomics
    Patricia M Palagi
    J Proteomics 71:210. 2008

Collaborators

Detail Information

Publications9

  1. ncbi request reprint MSight: an image analysis software for liquid chromatography-mass spectrometry
    Patricia M Palagi
    Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland
    Proteomics 5:2381-4. 2005
    ..We present MSight, a new software designed to construct and manipulate MS images, as well as to facilitate their analysis and comparison...
  2. ncbi request reprint Proteome informatics I: bioinformatics tools for processing experimental data
    Patricia M Palagi
    Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland
    Proteomics 6:5435-44. 2006
    ..It also discloses initiatives that propose to automate the processes of MS analysis and enhance the quality of the obtained results...
  3. doi request reprint A suite of tools to analyse and publish 2-DE data
    Christine Hoogland
    Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland
    Proteomics 8:4907-9. 2008
    ..This short communication highlights in a single and summarised view, this workflow and the current bioinformatics solutions developed by the Proteome Informatics Group at the Swiss Institute of Bioinformatics...
  4. ncbi request reprint SPS' Digest: the Swiss Proteomics Society selection of proteomics articles
    Christine Hoogland
    Swiss Institute of Bioinformatics, CMU, I Michel Servet, CH 1211 Geneva, Switzerland
    Proteomics 5:3045-7. 2005
    ..The purpose of SPS' Digest is to gather a selection of proteomics articles, to categorize them, and to make the list available on a periodic basis through a web page and email alerts...
  5. doi request reprint Database interrogation algorithms for identification of proteins in proteomic separations
    Patricia M Palagi
    Swiss Institute of Bioinformatics, CMU 1, 1 rue Michel Servet, CH 1211, Geneva 4, Switzerland
    Methods Mol Biol 519:515-31. 2009
    ..A variety of different programs for protein identification with database interrogation has been developed. This chapter focuses on the use of the software Aldente and Phenyx, for MS and tandem MS identification, respectively...
  6. doi request reprint LC/MS data processing for label-free quantitative analysis
    Patricia M Palagi
    Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland
    Methods Mol Biol 696:369-77. 2011
    ..These two tools can be used in a complementary way and one of the possible usages is described here...
  7. doi request reprint Calmodulin expression distinguishes the smooth muscle cell population of human carotid plaque
    Matteo Coen
    Department of Pathology and Immunology, Faculty of Medicine, University of Geneva, Geneva, Switzerland
    Am J Pathol 183:996-1009. 2013
    ..Further studies of small SMCs could be instrumental in understanding atherosclerosis pathogenesis and in planning therapeutic strategies. ..
  8. ncbi request reprint Promoting proteomics knowledge in Europe: report on the activities of the EuPA Education Committee 2006-2007
    Juan Pablo Albar
    ProteoRed, Centro Nacional de Biotecnologia, Madrid, Spain
    Proteomics 7:90-4. 2007
    ..Another important event has been the merger of the EuPA and HUPO (Human Proteome Organisation) Education Committees into a single one in order to combine ideas and ef for ts that will favour global education in proteomics...
  9. doi request reprint The Swiss Proteomics Society (SPS) was one of the first European associations to be created in the field of proteomics
    Patricia M Palagi
    J Proteomics 71:210. 2008