Angel Rubio

Summary

Country: Spain

Publications

  1. ncbi Getting DNA copy numbers without control samples
    Maria Ortiz-Estevez
    Group of Bioinformatics, CEIT and TECNUN, University of Navarra, San Sebastian, Spain
    Algorithms Mol Biol 7:19. 2012
  2. ncbi SPACE: an algorithm to predict and quantify alternatively spliced isoforms using microarrays
    Miguel A Anton
    CEIT and TECNUN, University of Navarra, San Sebastian, Spain
    Genome Biol 9:R46. 2008
  3. ncbi Development of a novel splice array platform and its application in the identification of alternative splice variants in lung cancer
    Ruben Pio
    Division of Oncology, Center for Applied Medical Research, Pamplona, Spain
    BMC Genomics 11:352. 2010
  4. ncbi Improvements to previous algorithms to predict gene structure and isoform concentrations using Affymetrix Exon arrays
    Miguel A Anton
    CEIT and TECNUN, University of Navarra, San Sebastian, Spain
    BMC Bioinformatics 11:578. 2010
  5. ncbi CalMaTe: a method and software to improve allele-specific copy number of SNP arrays for downstream segmentation
    Maria Ortiz-Estevez
    CEIT and TECNUN, University of Navarra, 20018 San Sebastian, Spain
    Bioinformatics 28:1793-4. 2012

Collaborators

Detail Information

Publications5

  1. ncbi Getting DNA copy numbers without control samples
    Maria Ortiz-Estevez
    Group of Bioinformatics, CEIT and TECNUN, University of Navarra, San Sebastian, Spain
    Algorithms Mol Biol 7:19. 2012
    ..abstract:..
  2. ncbi SPACE: an algorithm to predict and quantify alternatively spliced isoforms using microarrays
    Miguel A Anton
    CEIT and TECNUN, University of Navarra, San Sebastian, Spain
    Genome Biol 9:R46. 2008
    ..The results presented here show its robustness and accuracy for real and simulated data...
  3. ncbi Development of a novel splice array platform and its application in the identification of alternative splice variants in lung cancer
    Ruben Pio
    Division of Oncology, Center for Applied Medical Research, Pamplona, Spain
    BMC Genomics 11:352. 2010
    ..In this study, a novel splice array approach was developed, including the design of a high-density oligonucleotide array, a labeling procedure, and an algorithm to identify splice events...
  4. ncbi Improvements to previous algorithms to predict gene structure and isoform concentrations using Affymetrix Exon arrays
    Miguel A Anton
    CEIT and TECNUN, University of Navarra, San Sebastian, Spain
    BMC Bioinformatics 11:578. 2010
    ..In addition, gene structure prediction, i.e., the correspondence between probes and novel isoforms, is a field which is still unexplored...
  5. ncbi CalMaTe: a method and software to improve allele-specific copy number of SNP arrays for downstream segmentation
    Maria Ortiz-Estevez
    CEIT and TECNUN, University of Navarra, 20018 San Sebastian, Spain
    Bioinformatics 28:1793-4. 2012
    ..g. Affymetrix and Illumina. AVAILABILITY: The method is available on CRAN (http://cran.r-project.org/) in the open-source R package calmate, which also includes an add-on to the Aroma Project framework (http://www.aroma-project.org/)...