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Genomes and Genes | Amparo QuerolSummaryCountry: Spain Publications
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Publications
The complex and dynamic genomes of industrial yeastsAmparo Querol
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de los Alimentos CSIC, Burjasot, Valencia, Spain
FEMS Microbiol Lett 293:1-10. 2009..The polyploid and hybrid nature of the genomes confers robust characteristics such as tolerance to environmental stress to these industrial yeasts and provides a means for adaptive evolution...
Differences in the glucose and fructose consumption profiles in diverse Saccharomyces wine species and their hybrids during grape juice fermentationJordi Tronchoni
Departamento de Biotecnologia de Alimentos, Instituto de Agroquimica y Tecnologia de los Alimentos, CSIC P O Box 73, E 46100 Burjassot, Valencia, Spain
Int J Food Microbiol 134:237-43. 2009..This kind of studies can be very useful for the wine industry to select yeast strains with different glucose/fructose preferences...
Molecular evolution in yeast of biotechnological interestAmparo Querol
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de Alimentos, CSIC, P O Box 73, 46100, Burjassot, Valencia, Spain
Int Microbiol 6:201-5. 2003..This review describes the phylogenetic relationships among Saccharomyces and Kluyveromyces species and the different mechanisms involved in the adaptive evolution of industrial yeast strains...
Molecular characterization of new natural hybrids of Saccharomyces cerevisiae and S. kudriavzevii in brewingSara S González
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de Alimentos CSIC, P O Box 73, 46100 Burjassot, Valencia, Spain
Appl Environ Microbiol 74:2314-20. 2008..The present study raises new questions about the prevalence of these new hybrids in brewing as well as their contribution to the properties of the final product...
Adaptive evolution of wine yeastAmparo Querol
Departamento de Biotecnologia de Alimentos, Instituto de Agroquimica y Tecnologia de Alimentos, CSIC, P O Box 73, 46100 Burjassot, Valencia, Spain
Int J Food Microbiol 86:3-10. 2003..In this review, we describe the different mechanisms involved in the adaptive evolution of wine yeast strains...
Natural hybrids from Saccharomyces cerevisiae, Saccharomyces bayanus and Saccharomyces kudriavzevii in wine fermentationsSara S González
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de Alimentos CSIC, Burjassot, Valencia, Spain
FEMS Yeast Res 6:1221-34. 2006..bayanusxS. cerevisiaexS. kudriavzevii. This is the first time that S. cerevisiaexS. kudriavzevii hybrids have been described which have been involved in wine fermentation...
Enological characterization of natural hybrids from Saccharomyces cerevisiae and S. kudriavzeviiSara S González
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de Alimentos CSIC, Apdo 73, 46100 Burjassot, Valencia, Spain
Int J Food Microbiol 116:11-8. 2007..The behavior displayed by these hybrids in the fermentations studied in this work leads us to conclude that the use of hybrid strains can constitute an advantage in wine making...
Fermentative stress adaptation of hybrids within the Saccharomyces sensu stricto complexCarmela Belloch
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de los Alimentos, CSIC, PO Box 73 E 46100 Burjassot, Valencia, Spain
Int J Food Microbiol 122:188-95. 2008..These results open new perspectives in the construction of new hybrid strains with biotechnological interest, as the characteristics of the parents may result in interesting combinations in the hybrids...
Natural hybrids of S. cerevisiae x S. kudriavzevii share alleles with European wild populations of Saccharomyces kudriavzeviiChristian A Lopes
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de los Alimentos, CSIC, Valencia, Spain
FEMS Yeast Res 10:412-21. 2010..kudriavzevii type strain, but identical to the alleles previously reported for natural S. cerevisiaexS. kudriavzevii hybrids. These results clearly support the hypothesis of a European origin for these natural hybrids...
A new PCR-based method for monitoring inoculated wine fermentationsVictoria Lopez
Departamento de Biotecnologi a, Instituto de Agroqui mica y Tecnología de Alimentos CSIC, PO Box 73, 46100, Valencia, Burjassot, Spain
Int J Food Microbiol 81:63-71. 2003..The main advantage for the wineries is that the must sample can be used directly for the PCR reaction obtaining very fast results (in approximately 8 h). This allows the wine industries to intervene quickly if necessary...
Chimeric genomes of natural hybrids of Saccharomyces cerevisiae and Saccharomyces kudriavzeviiCarmela Belloch
Instituto de Agroquimica y Tecnologia de los Alimentos, IATA CSIC, P O Box 73, E 46100 Burjassot, Spain
Appl Environ Microbiol 75:2534-44. 2009..As a result of the selective processes acting during fermentation, hybrid genomes maintained the S. cerevisiae genome but reduced the S. kudriavzevii fraction...
Identification of species in the genus Pichia by restriction of the internal transcribed spacers (ITS1 and ITS2) and the 5.8S ribosomal DNA geneMercedes Villa-Carvajal
, , CSIC, P.O. Box 73, 46100 Burjassot, Valencia, Spain
Antonie Van Leeuwenhoek 90:171-81. 2006..8S-ITS rDNA failed to differentiate between some Pichia and Candida species that could be distinguished on the basis of the sequence of the 5.8S-ITS rRNA region or the sequence of the D1/D2 domain of the 26S rDNA gene...
Food and probiotic strains from the Saccharomyces cerevisiae species as a possible origin of human systemic infectionsRosa de Llanos
, , 46100 Burjassot, Valencia, Spain
Int J Food Microbiol 110:286-90. 2006..boulardii strain. The association of S. boulardii with cases of fungemia has been reported previously. Nevertheless, this is the first time that a baker's yeast has been isolated from blood...
Physiological characterization of spoilage strains of Zygosaccharomyces bailii and Zygosaccharomyces rouxii isolated from high sugar environmentsPatricia Martorell
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de Alimentos CSIC, P O Box 73, E 46100 Burjassot, Valencia, Spain
Int J Food Microbiol 114:234-42. 2007..These results indicate that spoilage by yeasts such as Z. bailii may be better prevented by use of biocidal cleaning agents in the factory, rather than treating the food with preservatives...
Transcriptomics in human blood incubation reveals the importance of oxidative stress response in Saccharomyces cerevisiae clinical strainsSilvia Llopis
Instituto de Agroquimica y Tecnologia de los Alimentos, IATA CSIC, Burjassot, Spain
BMC Genomics 13:419. 2012..Some clinical strains showed in vivo and in vitro virulence traits and were able to cause death in mice whereas other clinical strains were avirulent...
Molecular characterization of clinical Saccharomyces cerevisiae isolates and their association with non-clinical strainsRosa de Llanos
, , Burjassot, Valencia, Spain
Syst Appl Microbiol 27:427-35. 2004..3% and 19.8% of the clinical isolates and there seemed to be a connection between their ability to colonize humans and their ability to cause vaginal infection. The rest of food isolates were not grouped with clinical strains...
Differences in activation of MAP kinases and variability in the polyglutamine tract of Slt2 in clinical and non-clinical isolates of Saccharomyces cerevisiaeRosa de Llanos
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de los Alimentos, CSIC, PO Box 73, 46100 Burjassot, Valencia, Spain
Yeast 27:549-61. 2010..We suggest that this variability may influence biological features of the Slt2 protein, allowing it to adapt swiftly in order to survive in unusual environments...
Comparative genomics among Saccharomyces cerevisiae × Saccharomyces kudriavzevii natural hybrid strains isolated from wine and beer reveals different originsDavid Peris
Cavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia, Parc Cientific, P, O, Box 22085, E 46071, Valencia, Spain
BMC Genomics 13:407. 2012..cerevisiae × S. kudriavzevii natural hybrids isolated from wine and beer fermentations to infer their evolutionary origins and to figure out the potential role of common S. kudriavzevii gene fraction present in these hybrids...
Evaluation of different genetic procedures for the generation of artificial hybrids in Saccharomyces genus for winemakingLaura Pérez-Través
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de los Alimentos, CSIC, P O Box 73 E 46100 Burjassot, Valencia, Spain
Int J Food Microbiol 156:102-11. 2012..In this work, a wine yeast genetic stabilization process was developed and vegetatively stable hybrids were obtained...
Exclusion of Saccharomyces kudriavzevii from a wine model system mediated by Saccharomyces cerevisiaeF Noé Arroyo-López
Institut Cavanilles de Biodiversitat i Biologia Evolutiva, Universitat de Valencia, Edificio de Institutos Campus de Paterna, E 46100 Burjassot, Valencia, Spain
Yeast 28:423-35. 2011..cerevisiae × S. kudriavzevii hybrids most likely originated in wild environments rather than in industrial fermentations...
Identification of species of the genus Candida by analysis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacersRosa de Llanos Frutos
, , CSIC P.O. Box 73, 46100 Burjassot, Valencia, Spain
Antonie Van Leeuwenhoek 85:175-85. 2004..The present work improves the database available online at the IATA web page (http://motor.edinfo.es/iata/) with the patterns of 75 species belonging to the genus Candida...
Application of a substrate inhibition model to estimate the effect of fructose concentration on the growth of diverse Saccharomyces cerevisiae strainsF Noé Arroyo-López
Institut Cavanilles de Biodiversitat i Biologia Evolutiva, Universitat de Valencia, Edifici d Instituts, Parc Científic de Paterna, Valencia, Spain
J Ind Microbiol Biotechnol 36:663-9. 2009....
Authentication and identification of Saccharomyces cerevisiae 'flor' yeast races involved in sherry ageingBraulio Esteve-Zarzoso
, , PO Box 73, 46100 Burjassot, , Spain; CECT (Spanish Type Culture Collection, , Burjassot, , Spain
Antonie Van Leeuwenhoek 85:151-8. 2004..8S rRNA pattern different from the rest of the Saccharomyces cerevisiae strains we propose that they should be included as a single race or variety inside the S. cerevisiae taxon...
Effect of aromatic precursor addition to wine fermentations carried out with different Saccharomyces species and their hybridsAmparo Gamero
Departamento de Biotecnologia, Instituto de Agroquímica y Tecnología de los Alimentos IATA, CSIC, Avda Agustín Escardino 7, 46980 Paterna, Valencia, Spain
Int J Food Microbiol 147:33-44. 2011..Altogether, these results suggest that it is possible to modulate wine aroma by employing different yeast species in order to create new wines with different aromatic notes...
Molecular characterisation of the species of the genus ZygosaccharomycesBraulio Esteve-Zarzoso
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de Alimentos (CSIC, Burjassot, Valincia, Spain
Syst Appl Microbiol 26:404-11. 2003..However, in the cases of Z. bailii and Z. lentus, electrophoretic karyotyping there was considerable variation...
An analysis of inter- and intraspecific genetic variabilities in the Kluyveromyces marxianus group of yeast species for the reconsideration of the K. lactis taxonCarmela Belloch
, Universitat de Valencia, Calle Dr Moliner 50, 46100 Burjassot, Valencia, Spain
Yeast 19:257-68. 2002..These results suggest that the present taxon K. lactis is a complex of different species, subspecies or, at least, genetically structured populations...
Lipid composition of wine strains of Saccharomyces kudriavzevii and Saccharomyces cerevisiae grown at low temperatureJordi Tronchoni
Departamento de Biotecnología de los Alimentos, Instituto de Agroquimica y Tecnologia de Alimentos CSIC, P O Box 73, 46100 Burjassot, Valencia, Spain
Int J Food Microbiol 155:191-8. 2012..kudriavzevii at low temperatures. We have also confirmed the better fermentation performance of the strains of this species at low temperature, being an appealing alternative to S. cerevisiae for cold fermentations...
A comparison of clinical and food Saccharomyces cerevisiae isolates on the basis of potential virulence factorsRosa de Llanos
, , CSIC, P.O. Box 73, 46100, Burjassot, Valencia, Spain
Antonie Van Leeuwenhoek 90:221-31. 2006..cerevisiae (var. boulardii), were exceptions and based on their physiological traits these yeasts would appear to be related to clinical strains...
Molecular monitoring of spoilage yeasts during the production of candied fruit nougats to determine food contamination sourcesPatricia Martorell
, , P.O. Box 73, Burjassot E-46100, Valencia, Spain
Int J Food Microbiol 101:293-302. 2005..bailii and two strains of Z. rouxii were involved in the spoilage of candied fruits. Moreover, the Z. bailii strain was also present in the spoiled nougat, hence being responsible of this alteration...
Candida cabralensis sp. nov., a yeast species isolated from traditional Spanish blue-veined Cabrales cheeseAna Belén Flórez
Departamento de Microbiología y Bioquímica, Instituto de Productos Lacteos de Asturias, CSIC, Carretera de Infiesto s n, Asturias, Spain
Int J Syst Evol Microbiol 60:2671-4. 2010..The name Candida cabralensis sp. nov. is proposed, and the isolate 1AD8(T) (=CECT 13027(T) =CBS 11679(T)) is the type strain of this novel taxon...
Analysis of the genetic variability in the species of the Saccharomyces sensu stricto complexM Teresa Fernández-Espinar
Departamento de Biotecnologia, Instituto de Agroquimica y Tecnologia de Alimentos CSIC, PO Box 73, 46100 Burjassot, Valencia, Spain
Yeast 20:1213-26. 2003..Among the 58 strains analysed, six S. pastorianus strains were hybrids, although the fraction of genome coming from each parent varied depending on the strain...
Clinical Saccharomyces cerevisiae isolates cannot cross the epithelial barrier in vitroRoberto Perez-Torrado
Instituto de Agroquimica y Tecnologia de los Alimentos, CSIC, Spain
Int J Food Microbiol 157:59-64. 2012..glabrata and C. albicans, S. cerevisiae was not able to cross the intestinal barrier. We concluded that S. cerevisiae can only perform opportunistic or passive crossings when epithelial barrier integrity is previously compromised...
Genome-wide gene expression of a natural hybrid between Saccharomyces cerevisiae and S. kudriavzevii under enological conditionsMariana Combina
Instituto Nacional de Investigaciones Agropecuarias INTA, San Martin 3853, CP 5507 Lujan de Cuyo Mendoza, Argentina
Int J Food Microbiol 157:340-5. 2012..While some genes inherited regulation patterns from one of the parents, most of the up-regulated genes presented a new gene expression pattern, probably generated during the hybridization and adaptation process...
Sequence-based identification of species belonging to the genus DebaryomycesPatricia Martorell
, , P.O. Box 73, E-46100 Burjassot, , Spain
FEMS Yeast Res 5:1157-65. 2005..robertsiae, D. udenii and D. vanrijiae showed high sequence similarity in ribosomal regions with one or several species. In these cases, sequence comparison of the ACT1 gene is proposed to ensure unequivocal strain designation...
Molecular typing of the yeast species Dekkera bruxellensis and Pichia guilliermondii recovered from wine related sourcesPatricia Martorell
, , P.O. Box 73, E-46100 Burjassot, , Spain
Int J Food Microbiol 106:79-84. 2006..The high degree of polymorphism observed shows that intraspecific typing is essential for accurate yeast dissemination studies in wine related environments...
Metabolomic comparison of Saccharomyces cerevisiae and the cryotolerant species S. bayanus var. uvarum and S. kudriavzevii during wine fermentation at low temperatureMaria López-Malo
Departamento de Biotecnología de los Alimentos, Instituto de Agroquimica y Tecnologia de los Alimentos, Valencia, Spain
PLoS ONE 8:e60135. 2013..However, these two species have developed different strategies for cold resistance. S. bayanus var. uvarum presented elevated shikimate pathway activity, while S. kudriavzevii displayed increased NAD(+) synthesis...
Candida patagonica sp. nov., a new species of yeast from cellar surfacesMarcela P Sangorrín
Departamento de Quimica, Laboratorio de Microbiología y Biotecnología, Facultad de Ingenieria, Universidad Nacional del Comahue, Buenos Aires 1400, 8300, Neuquen, Argentina
Antonie Van Leeuwenhoek 92:77-81. 2007..All these data support the hypothesis that the new yeast, named Candida patagonica, is a novel species related to C. bituminiphila. The type strain is UNCOMA 159.5 (= CECT 12029 = CBS 10443)...
Four new Candida cretensis strains isolated from Spanish fermented sausages (chorizo): taxonomic and phylogenetic implicationsManuel Quirós
Departamento de Microbiologia, Facultad de Biologia, Universidad Complutense de Madrid, Madrid, Spain
FEMS Yeast Res 8:485-91. 2008..cretensis according to the restriction patterns of the intergenic spacer rRNA gene region and on the basis of some physiological properties that are of ecological relevance...
Patagonian wines: the selection of an indigenous yeast starterChristian A Lopes
Departamento de Quimica, Laboratorio de Microbiología y Biotecnología, Facultad de Ingenieria, Universidad Nacional del Comahue, Buenos Aires 1400, 8300 Neuquen, Argentina
J Ind Microbiol Biotechnol 34:539-46. 2007..cerevisiae killer strains assayed. Red wines with differential volatile profiles and interesting enological features were obtained at laboratory scale by using this selected indigenous strain...
Combined use of killer biotype and mtDNA-RFLP patterns in a Patagonian wine Saccharomyces cerevisiae diversity studyChristian A Lopes
, , , Universidad Nacional del Comahue, Buenos Aires 1400, , Argentina
Antonie Van Leeuwenhoek 89:147-56. 2006..The combined use of the mtDNA-RFLP analysis together with the killer biotype method proved to be a powerful tool in the fingerprinting of the enological S. cerevisiae strains...
Patagonian wines: implantation of an indigenous strain of Saccharomyces cerevisiae in fermentations conducted in traditional and modern cellarsChristian A Lopes
Departamento de Quimica, Laboratorio de Microbiología y Biotecnología, Facultad de Ingenieria, Universidad Nacional del Comahue, Buenos Aires 1400, 8300, Neuquen, Argentina
J Ind Microbiol Biotechnol 34:139-49. 2007..Therefore, MMf9 selected indigenous strain could be an interesting yeast starter culture in North Patagonian wines...
Molecular characterization of a chromosomal rearrangement involved in the adaptive evolution of yeast strainsJosé E Pérez-Ortín
Departament de Bioquimica i Biologia Molecular, Universitat de Valencia, Spain
Genome Res 12:1533-9. 2002..This is the first time that a gross chromosomal rearrangement is shown to be involved in the adaptive evolution of Saccharomyces cerevisiae...
Correlation between acetaldehyde and ethanol resistance and expression of HSP genes in yeast strains isolated during the biological aging of sherry winesAgustin Aranda
Departamento de Biotecnología i Biologia Molecular, Facultat de Ciencies Biologiques, Universtitat de Valencia, Spain
Arch Microbiol 177:304-12. 2002..In strain C, there was a clear correlation between resistance to ethanol and acetaldehyde, the high induction of HSP genes by these compounds and its presence as the predominant strain in most levels of several soleras...
PCR-RFLP analysis of the IGS region of rDNA: a useful tool for the practical discrimination between species of the genus DebaryomycesManuel Quirós
Departamento de Microbiologia, Facultad de Biologia, Universidad Complutense de Madrid, C Jose Antonio Novais, 2, 28040, Madrid, Spain
Antonie Van Leeuwenhoek 90:211-9. 2006..africanus, var. polymorphus), respectively. PCR-RFLP analysis of the IGS region of rDNA is proposed as a clear and reproducible technique for the practical discrimination of species of the yeast genus Debaryomyces...
