Jeff Skinner

Summary

URL: http://www.linkedin.com/pub/jeff-skinner/9/401/a38
Summary:
Jeff Skinner is a biostatistician and bioinformatics specialist with expertise in statistics, microarray analysis and other fields

Publications

  1. pmc Black race as a predictor of poor health outcomes among a national cohort of HIV/AIDS patients admitted to US hospitals: a cohort study
    Christine U Oramasionwu
    College of Pharmacy, The University of Texas, Austin, TX, USA
    BMC Infect Dis 9:127. 2009
  2. pmc A study of the use of impulse oscillometry in the evaluation of children with asthma: analysis of lung parameters, order effect, and utility compared with spirometry
    Hirsh D Komarow
    Laboratory of Allergic Diseases, National Institute of Allergy and Infectious Diseases National Institutes of Health, Bethesda, Maryland 20892 1960, USA
    Pediatr Pulmonol 47:18-26. 2012
  3. pmc Differences in national antiretroviral prescribing patterns between black and white patients with HIV/AIDS, 1996-2006
    Christine U Oramasionwu
    College of Pharmacy, University of Texas at Austin, TX, USA
    South Med J 104:794-800. 2011
  4. pmc Construct and Compare Gene Coexpression Networks with DAPfinder and DAPview
    Jeff Skinner
    Bioinformatics and Computational Biosciences Branch BCBB, Office of Cyber Infrastructure and Computational Biology OCICB, National Institute of Allergy and Infectious Disease NIAID, National Institutes if Health NIH, Bethesda, Maryland, USA
    BMC Bioinformatics 12:286. 2011
  5. doi request reprint Markers of endothelial dysfunction, coagulation and tissue fibrosis independently predict venous thromboembolism in HIV
    Laura W Musselwhite
    National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, USA
    AIDS 25:787-95. 2011
  6. pmc Elicitation of structure-specific antibodies by epitope scaffolds
    Gilad Ofek
    Vaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA
    Proc Natl Acad Sci U S A 107:17880-7. 2010
  7. pmc Local conformational stability of HIV-1 gp120 in unliganded and CD4-bound states as defined by amide hydrogen/deuterium exchange
    Leopold Kong
    Vaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892 3027, USA
    J Virol 84:10311-21. 2010
  8. pmc Relationship between antibody 2F5 neutralization of HIV-1 and hydrophobicity of its heavy chain third complementarity-determining region
    Gilad Ofek
    Vaccine Research Center, NIAID, National Institutes of Health, Bethesda, Maryland 20892, USA
    J Virol 84:2955-62. 2010
  9. ncbi request reprint Disparities in antiretroviral prescribing for blacks and whites in the United States
    Christine U Oramasionwu
    The University of Texas at Austin College of Pharmacy, Austin, Texas, USA
    J Natl Med Assoc 101:1140-4. 2009
  10. pmc Evaluation of reference genes for real-time quantitative PCR studies in Candida glabrata following azole treatment
    Qingdi Quentin Li
    Clinical Mycology Section, Laboratory of Clinical Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA
    BMC Mol Biol 13:22. 2012

Collaborators

Detail Information

Publications10

  1. pmc Black race as a predictor of poor health outcomes among a national cohort of HIV/AIDS patients admitted to US hospitals: a cohort study
    Christine U Oramasionwu
    College of Pharmacy, The University of Texas, Austin, TX, USA
    BMC Infect Dis 9:127. 2009
    ..To investigate the impact of these factors, we compared hospital mortality and length of stay (LOS) between Blacks and Whites with HIV/AIDS while adjusting for differences in these key characteristics...
  2. pmc A study of the use of impulse oscillometry in the evaluation of children with asthma: analysis of lung parameters, order effect, and utility compared with spirometry
    Hirsh D Komarow
    Laboratory of Allergic Diseases, National Institute of Allergy and Infectious Diseases National Institutes of Health, Bethesda, Maryland 20892 1960, USA
    Pediatr Pulmonol 47:18-26. 2012
    ....
  3. pmc Differences in national antiretroviral prescribing patterns between black and white patients with HIV/AIDS, 1996-2006
    Christine U Oramasionwu
    College of Pharmacy, University of Texas at Austin, TX, USA
    South Med J 104:794-800. 2011
    ..This project therefore sought to determine whether the reason for this discrepancy in health outcomes could be attributed to disparities in use of antiretroviral therapy between black and white patients with HIV...
  4. pmc Construct and Compare Gene Coexpression Networks with DAPfinder and DAPview
    Jeff Skinner
    Bioinformatics and Computational Biosciences Branch BCBB, Office of Cyber Infrastructure and Computational Biology OCICB, National Institute of Allergy and Infectious Disease NIAID, National Institutes if Health NIH, Bethesda, Maryland, USA
    BMC Bioinformatics 12:286. 2011
    ..DAPfinder and DAPview are novel BRB-ArrayTools plug-ins to construct gene coexpression networks and identify significant differences in pairwise gene-gene coexpression between two phenotypes...
  5. doi request reprint Markers of endothelial dysfunction, coagulation and tissue fibrosis independently predict venous thromboembolism in HIV
    Laura W Musselwhite
    National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, USA
    AIDS 25:787-95. 2011
    ..We investigated the relationship between venous thrombosis and HIV-related characteristics, traditional risk factors of hypercoagulability, and pre-event levels of biomarkers...
  6. pmc Elicitation of structure-specific antibodies by epitope scaffolds
    Gilad Ofek
    Vaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA
    Proc Natl Acad Sci U S A 107:17880-7. 2010
    ..Epitope scaffolds thus provide a means to elicit antibodies that recognize a predetermined target shape and sequence, even if that shape is transient in nature, and a means by which to dissect factors influencing such elicitation...
  7. pmc Local conformational stability of HIV-1 gp120 in unliganded and CD4-bound states as defined by amide hydrogen/deuterium exchange
    Leopold Kong
    Vaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892 3027, USA
    J Virol 84:10311-21. 2010
    ..The results provide a framework for understanding how local conformational stability influences entropic change, conformational diversity, and structural rearrangements in the gp120-CD4 binding reaction...
  8. pmc Relationship between antibody 2F5 neutralization of HIV-1 and hydrophobicity of its heavy chain third complementarity-determining region
    Gilad Ofek
    Vaccine Research Center, NIAID, National Institutes of Health, Bethesda, Maryland 20892, USA
    J Virol 84:2955-62. 2010
    ..Together, the results provide a more complete understanding of the 2F5 mechanism of HIV-1 neutralization and indicate ways to enhance the potency of MPER-directed antibodies...
  9. ncbi request reprint Disparities in antiretroviral prescribing for blacks and whites in the United States
    Christine U Oramasionwu
    The University of Texas at Austin College of Pharmacy, Austin, Texas, USA
    J Natl Med Assoc 101:1140-4. 2009
    ..We therefore investigated whether this discrepancy in health outcomes is attributable to disparities in the receipt of appropriate HAART between black and white human immunodeficiency virus (HIV) patients...
  10. pmc Evaluation of reference genes for real-time quantitative PCR studies in Candida glabrata following azole treatment
    Qingdi Quentin Li
    Clinical Mycology Section, Laboratory of Clinical Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA
    BMC Mol Biol 13:22. 2012
    ..The present study aimed to identify reference genes as internal controls for gene expression studies by RT-qPCR in azole-stimulated Candida glabrata...