Michihiko Shimomura

Summary

Publications

  1. ncbi KAIKObase: an integrated silkworm genome database and data mining tool
    Michihiko Shimomura
    Mitsubishi Space Software Co Ltd, Takezono, Tsukuba, Ibaraki, Japan
    BMC Genomics 10:486. 2009
  2. ncbi A BAC-based integrated linkage map of the silkworm Bombyx mori
    Kimiko Yamamoto
    Insect Genome Research Unit, National Institute of Agrobiological Sciences, Owashi, Tsukuba, Ibaraki 305 8634, Japan
    Genome Biol 9:R21. 2008
  3. ncbi Identification of anhydrobiosis-related genes from an expressed sequence tag database in the cryptobiotic midge Polypedilum vanderplanki (Diptera; Chironomidae)
    Richard Cornette
    National Institute of Agrobiological Sciences, 1 2 Ohwashi, Tsukuba, Ibaraki 305 8634, Japan
    J Biol Chem 285:35889-99. 2010
  4. ncbi DaizuBase, an integrated soybean genome database including BAC-based physical maps
    Yuichi Katayose
    National Institute of Agrobiological Sciences, 1 2 Ohwashi, Tsukuba, Ibaraki 305 8634, Japan
    Breed Sci 61:661-4. 2012
  5. ncbi End-sequencing and characterization of silkworm (Bombyx mori) bacterial artificial chromosome libraries
    Yoshitaka Suetsugu
    National Institute of Agrobiological Sciences, 1 2 Owashi, Tsukuba, Ibaraki 305 8634, Japan
    BMC Genomics 8:314. 2007
  6. ncbi Annotated ESTs from various tissues of the brown planthopper Nilaparvata lugens: a genomic resource for studying agricultural pests
    Hiroaki Noda
    National Institute of Agrobiological Sciences, Owashi, Tsukuba, Ibaraki 305 8634, Japan
    BMC Genomics 9:117. 2008
  7. ncbi The genome sequence of silkworm, Bombyx mori
    Kazuei Mita
    Genome Research Department, National Institute of Agrobiological Sciences, 1 2 Owashi, Tsukuba, Ibaraki 305 8634, Japan
    DNA Res 11:27-35. 2004

Collaborators

Detail Information

Publications7

  1. ncbi KAIKObase: an integrated silkworm genome database and data mining tool
    Michihiko Shimomura
    Mitsubishi Space Software Co Ltd, Takezono, Tsukuba, Ibaraki, Japan
    BMC Genomics 10:486. 2009
    ..Now, both the datasets have been merged and assembled through a joint collaboration between the two groups...
  2. ncbi A BAC-based integrated linkage map of the silkworm Bombyx mori
    Kimiko Yamamoto
    Insect Genome Research Unit, National Institute of Agrobiological Sciences, Owashi, Tsukuba, Ibaraki 305 8634, Japan
    Genome Biol 9:R21. 2008
    ..For a more complete genome analysis, we developed extended scaffolds combining physical maps with improved genetic maps...
  3. ncbi Identification of anhydrobiosis-related genes from an expressed sequence tag database in the cryptobiotic midge Polypedilum vanderplanki (Diptera; Chironomidae)
    Richard Cornette
    National Institute of Agrobiological Sciences, 1 2 Ohwashi, Tsukuba, Ibaraki 305 8634, Japan
    J Biol Chem 285:35889-99. 2010
    ..A third major feature is the predicted increase in trehalose synthesis and in the expression of various transporter proteins allowing the distribution of trehalose and other solutes to all tissues...
  4. ncbi DaizuBase, an integrated soybean genome database including BAC-based physical maps
    Yuichi Katayose
    National Institute of Agrobiological Sciences, 1 2 Ohwashi, Tsukuba, Ibaraki 305 8634, Japan
    Breed Sci 61:661-4. 2012
    ..The current status of physical mapping of the soybean genome and construction of database are presented...
  5. ncbi End-sequencing and characterization of silkworm (Bombyx mori) bacterial artificial chromosome libraries
    Yoshitaka Suetsugu
    National Institute of Agrobiological Sciences, 1 2 Owashi, Tsukuba, Ibaraki 305 8634, Japan
    BMC Genomics 8:314. 2007
    ....
  6. ncbi Annotated ESTs from various tissues of the brown planthopper Nilaparvata lugens: a genomic resource for studying agricultural pests
    Hiroaki Noda
    National Institute of Agrobiological Sciences, Owashi, Tsukuba, Ibaraki 305 8634, Japan
    BMC Genomics 9:117. 2008
    ....
  7. ncbi The genome sequence of silkworm, Bombyx mori
    Kazuei Mita
    Genome Research Department, National Institute of Agrobiological Sciences, 1 2 Owashi, Tsukuba, Ibaraki 305 8634, Japan
    DNA Res 11:27-35. 2004
    ..A search for Bombyx orthologs to Drosophila genes controlling sex determination in the WGS data revealed 11 Bombyx genes and suggested that the sex-determining systems differ profoundly between the two species...