Jochen M Schwenk

Summary

Publications

  1. pmc Toward next generation plasma profiling via heat-induced epitope retrieval and array-based assays
    Jochen M Schwenk
    Science for Life Laboratory, Royal Institute of Technology KTH, Stockholm, Sweden
    Mol Cell Proteomics 9:2497-507. 2010
  2. pmc Variance decomposition of protein profiles from antibody arrays using a longitudinal twin model
    Bernet S Kato
    Department of Twin Research and Genetic Epidemiology, King s College London, St, Thomas Hospital, Westminster Bridge Road, London SE1 7EH, UK
    Proteome Sci 9:73. 2011
  3. doi request reprint Systematic antibody and antigen-based proteomic profiling with microarrays
    Burcu Ayoglu
    Science for Life Laboratory, Department of Proteomics, School of Biotechnology, KTH Royal Institute of Technology, Stockholm, Sweden
    Expert Rev Mol Diagn 11:219-34. 2011
  4. doi request reprint Validation of serum protein profiles by a dual antibody array approach
    Rebecca Rimini
    Department of Proteomics, KTH Royal Institute of Technology, AlbaNova University Center, Stockholm, Sweden
    J Proteomics 73:252-66. 2009
  5. doi request reprint Comparative protein profiling of serum and plasma using an antibody suspension bead array approach
    Jochen M Schwenk
    Department of Proteomics, School of Biotechnology, KTH Royal Institute of Technology, AlbaNova University Center, Stockholm, Sweden
    Proteomics 10:532-40. 2010
  6. doi request reprint A lateral flow protein microarray for rapid determination of contagious bovine pleuropneumonia status in bovine serum
    Jesper Gantelius
    Division of Nanobiotechnology, School of Biotechnology, Royal Institute of Technology, Stockholm, Sweden
    J Microbiol Methods 82:11-8. 2010
  7. pmc Autoantibody profiling in multiple sclerosis using arrays of human protein fragments
    Burcu Ayoglu
    SciLifeLab Stockholm, School of Biotechnology, KTH Royal Institute of Technology, Stockholm, Sweden
    Mol Cell Proteomics 12:2657-72. 2013
  8. doi request reprint Antibody suspension bead arrays within serum proteomics
    Jochen M Schwenk
    Department of Proteomics, School of Biotechnology, KTH Royal Institute of Technology, AlbaNova University Center, Stockholm, Sweden
    J Proteome Res 7:3168-79. 2008
  9. doi request reprint Antibodies for profiling the human proteome-The Human Protein Atlas as a resource for cancer research
    Anna Asplund
    Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden
    Proteomics 12:2067-77. 2012
  10. pmc Recombinant surface proteomics as a tool to analyze humoral immune responses in bovines infected by Mycoplasma mycoides subsp. mycoides small colony type
    Carl Hamsten
    Department of Proteomics, School of Biotechnology, Royal Institute of Technology KTH, AlbaNova University Center, SE 106 91 Stockholm, Sweden
    Mol Cell Proteomics 8:2544-54. 2009

Collaborators

  • Mathias Uhlen
  • Helene Andersson-Svahn
  • Rebecca Rimini
  • Anja Persson
  • Emma Lundberg
  • Michael Hartmann
  • Charlotte Becker
  • John B March
  • Anders Bjartell
  • Fredrik Wiklund
  • Peter Nilsson
  • Burcu Ayoglu
  • Anna Häggmark
  • Maja Neiman
  • Jesper Gantelius
  • Anna Asplund
  • Johan Rockberg
  • Carl Hamsten
  • Linn Fagerberg
  • Mohsen Khademi
  • Tomas Olsson
  • Kimi Drobin
  • Fredrik Ponten
  • Bernet S Kato
  • Karin Jirstrom
  • Paul Hudson
  • Sophia Hober
  • Cajsa Algenäs
  • Hanna Tegel
  • Per Henrik Edqvist
  • Jan Mulder
  • Cristina Al-Khalili Szigyarto
  • Per Oksvold
  • Lisa Björling
  • Urban Rydberg
  • Caroline Kampf
  • Marie Skogs
  • Martin Zwahlen
  • Ulrika Qundos
  • Ingmarie Olsson
  • Jacob Odeberg
  • Kalle von Feilitzen
  • Sanna Byström
  • Jenny Ottosson Takanen
  • Holger Berling
  • Evelina Sjöstedt
  • Mattias Forsberg
  • Asa Sivertsson
  • Sanjay Navani
  • Daniel Klevebring
  • Per Henrik D Edqvist
  • Ulrika Igel
  • Tim D Spector
  • Amy Barrett
  • Chris C Holmes
  • George Nicholson
  • Mattias Rantalainen
  • Marica Hamsten
  • Johan Roeraade
  • Thomas O Joos

Detail Information

Publications17

  1. pmc Toward next generation plasma profiling via heat-induced epitope retrieval and array-based assays
    Jochen M Schwenk
    Science for Life Laboratory, Royal Institute of Technology KTH, Stockholm, Sweden
    Mol Cell Proteomics 9:2497-507. 2010
    ..The study shows a path of pursuit for large scale screening of biobank repositories in a flexible and proteome-wide fashion by utilizing heat-induced epitope retrieval and using an antibody suspension bead array format...
  2. pmc Variance decomposition of protein profiles from antibody arrays using a longitudinal twin model
    Bernet S Kato
    Department of Twin Research and Genetic Epidemiology, King s College London, St, Thomas Hospital, Westminster Bridge Road, London SE1 7EH, UK
    Proteome Sci 9:73. 2011
    ..abstract:..
  3. doi request reprint Systematic antibody and antigen-based proteomic profiling with microarrays
    Burcu Ayoglu
    Science for Life Laboratory, Department of Proteomics, School of Biotechnology, KTH Royal Institute of Technology, Stockholm, Sweden
    Expert Rev Mol Diagn 11:219-34. 2011
    ....
  4. doi request reprint Validation of serum protein profiles by a dual antibody array approach
    Rebecca Rimini
    Department of Proteomics, KTH Royal Institute of Technology, AlbaNova University Center, Stockholm, Sweden
    J Proteomics 73:252-66. 2009
    ....
  5. doi request reprint Comparative protein profiling of serum and plasma using an antibody suspension bead array approach
    Jochen M Schwenk
    Department of Proteomics, School of Biotechnology, KTH Royal Institute of Technology, AlbaNova University Center, Stockholm, Sweden
    Proteomics 10:532-40. 2010
    ....
  6. doi request reprint A lateral flow protein microarray for rapid determination of contagious bovine pleuropneumonia status in bovine serum
    Jesper Gantelius
    Division of Nanobiotechnology, School of Biotechnology, Royal Institute of Technology, Stockholm, Sweden
    J Microbiol Methods 82:11-8. 2010
    ....
  7. pmc Autoantibody profiling in multiple sclerosis using arrays of human protein fragments
    Burcu Ayoglu
    SciLifeLab Stockholm, School of Biotechnology, KTH Royal Institute of Technology, Stockholm, Sweden
    Mol Cell Proteomics 12:2657-72. 2013
    ....
  8. doi request reprint Antibody suspension bead arrays within serum proteomics
    Jochen M Schwenk
    Department of Proteomics, School of Biotechnology, KTH Royal Institute of Technology, AlbaNova University Center, Stockholm, Sweden
    J Proteome Res 7:3168-79. 2008
    ..The feasibility of this workflow was shown in a study with more than 200 clinical serum samples tested for 20 serum proteins...
  9. doi request reprint Antibodies for profiling the human proteome-The Human Protein Atlas as a resource for cancer research
    Anna Asplund
    Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden
    Proteomics 12:2067-77. 2012
    ..e. two independent antibodies targeting different and nonoverlapping epitopes on the same protein as well as comparative analysis of mRNA expression patterns with corresponding proteins...
  10. pmc Recombinant surface proteomics as a tool to analyze humoral immune responses in bovines infected by Mycoplasma mycoides subsp. mycoides small colony type
    Carl Hamsten
    Department of Proteomics, School of Biotechnology, Royal Institute of Technology KTH, AlbaNova University Center, SE 106 91 Stockholm, Sweden
    Mol Cell Proteomics 8:2544-54. 2009
    ..In conclusion, a toolbox with recombinant proteins and a flexible suspension array assay that allows multiplex analysis of humoral immune responses to M. mycoides SC has been created...
  11. doi request reprint Antibody-based profiling of cerebrospinal fluid within multiple sclerosis
    Anna Häggmark
    SciLifeLab Stockholm, School of Biotechnology, KTH Royal Institute of Technology, Stockholm, Sweden
    Proteomics 13:2256-67. 2013
    ..SERPINA3 instead was detected at higher levels in all MS patients compared to controls. The developed assay procedure now offers new possibilities for broad-scale protein profiling of CSF within neurological disorders. ..
  12. doi request reprint Antibody suspension bead arrays
    Jochen M Schwenk
    Science for Life Laboratory, Department of Proteomics, School of Biotechnology, KTH Royal Institute of Technology, 10691, Stockholm, Sweden
    Methods Mol Biol 723:29-36. 2011
    ..Presently, this workflow enables the profiling of 384 clinical samples for up to 100 proteins per assay...
  13. doi request reprint Discovery of epitopes for targeting the human epidermal growth factor receptor 2 (HER2) with antibodies
    Johan Rockberg
    School of Biotechnology, Royal Institute of Technology KTH, AlbaNova University Center, SE 106 91 Stockholm, Sweden
    Mol Oncol 3:238-47. 2009
    ..The work describes a new strategy to develop antibodies directed to non-overlapping epitopes and shows a path of pursuit to explore the epitope space of a target protein...
  14. doi request reprint Magnetic bead-based detection of autoimmune responses using protein microarrays
    Jesper Gantelius
    Division of Nanobiotechnology, School of Biotechnology, Royal Institute of Technology, Stockholm, Sweden
    N Biotechnol 26:269-76. 2009
    ..We propose from our findings that the magnetic bead-based detection option provides a simplified and cost effective readout method for protein microarrays...
  15. ncbi request reprint Determination of binding specificities in highly multiplexed bead-based assays for antibody proteomics
    Jochen M Schwenk
    Department of Proteomics, Royal Institute of Technology KTH, SE 10691 Stockholm, Sweden
    Mol Cell Proteomics 6:125-32. 2007
    ..This high throughput analysis will potentially have great impact on the possibility for the utilization of different antibody proteomics approaches where the quality assessment of antibodies is of the utmost importance...
  16. doi request reprint Contribution of antibody-based protein profiling to the human Chromosome-centric Proteome Project (C-HPP)
    Linn Fagerberg
    Science for Life Laboratory, KTH Royal Institute of Technology, Stockholm, Sweden
    J Proteome Res 12:2439-48. 2013
    ..The status for each gene with regards to protein evidence is visualized in a chromosome-centric manner as part of a new version of the Human Protein Atlas ( www.proteinatlas.org )...
  17. doi request reprint Highly multiplexed antibody suspension bead arrays for plasma protein profiling
    Kimi Drobin
    Science for Life Laboratory Stockholm, School of Biotechnology, KTH Royal Institute of Technology, Stockholm, Sweden
    Methods Mol Biol 1023:137-45. 2013
    ..Presently, this workflow enables the profiling of 384 samples for up to 384 proteins per assay...