Taewoo Ryu

Summary

Publications

  1. pmc The evolution of ultraconserved elements with different phylogenetic origins
    Taewoo Ryu
    Integrative Systems Biology Lab, Division of Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, 23955 6900, Kingdom of Saudi Arabia
    BMC Evol Biol 12:236. 2012
  2. pmc Unexpected complexity of the reef-building coral Acropora millepora transcription factor network
    Taewoo Ryu
    Division of Chemical and Life Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia
    BMC Syst Biol 5:58. 2011
  3. pmc SECOM: a novel hash seed and community detection based-approach for genome-scale protein domain identification
    Ming Fan
    Mathematical and Computer Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
    PLoS ONE 7:e39475. 2012
  4. pmc Dynamic epigenetic control of highly conserved noncoding elements
    Loqmane Seridi
    Division of Biological and Environmental Sciences and Engineering, Division of Applied Mathematics and Computer Sciences, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia
    PLoS ONE 9:e109326. 2014
  5. doi request reprint The co-transcriptome of uropathogenic Escherichia coli-infected mouse macrophages reveals new insights into host-pathogen interactions
    Charalampos Harris Mavromatis
    Division of Biological and Environmental Sciences and Engineering, Division of Computer, Electrical and Mathematical Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia Division of Medical Genetics, Department of Medicine, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, USA
    Cell Microbiol 17:730-46. 2015

Collaborators

Detail Information

Publications5

  1. pmc The evolution of ultraconserved elements with different phylogenetic origins
    Taewoo Ryu
    Integrative Systems Biology Lab, Division of Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, 23955 6900, Kingdom of Saudi Arabia
    BMC Evol Biol 12:236. 2012
    ..The evolutionary origins and functional roles of these elements in cellular systems, however, have not yet been determined...
  2. pmc Unexpected complexity of the reef-building coral Acropora millepora transcription factor network
    Taewoo Ryu
    Division of Chemical and Life Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia
    BMC Syst Biol 5:58. 2011
    ..Like in any other organism, the response of corals to stress is tightly controlled by the coordinated interplay of many transcription factors...
  3. pmc SECOM: a novel hash seed and community detection based-approach for genome-scale protein domain identification
    Ming Fan
    Mathematical and Computer Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
    PLoS ONE 7:e39475. 2012
    ..Furthermore, SECOM discovered two novel domains, likely of bacterial origin, that are taxonomically restricted to sea anemone and hydra. SECOM is an open-source program and available at http://sfb.kaust.edu.sa/Pages/Software.aspx...
  4. pmc Dynamic epigenetic control of highly conserved noncoding elements
    Loqmane Seridi
    Division of Biological and Environmental Sciences and Engineering, Division of Applied Mathematics and Computer Sciences, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia
    PLoS ONE 9:e109326. 2014
    ..The molecular functions of these elements have been partially elucidated, but the fundamental reason for their extreme conservation is still unknown...
  5. doi request reprint The co-transcriptome of uropathogenic Escherichia coli-infected mouse macrophages reveals new insights into host-pathogen interactions
    Charalampos Harris Mavromatis
    Division of Biological and Environmental Sciences and Engineering, Division of Computer, Electrical and Mathematical Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia Division of Medical Genetics, Department of Medicine, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, USA
    Cell Microbiol 17:730-46. 2015
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