Vassily Lyubetsky (Liubetskii, Liubetskiii)

Summary

Affiliation: Institute for information transmission problems, Russian Academy of Sciences
Location: Moscow, Russia
URL: http://lab6.iitp.ru
Grants:
Since 2001:
11771146 12391844 12762843 12762844 12942641 14593920 14593921 14593922 15135544 16240718 16202131 16358745 16358746 17007067 16813169 17140387 17685234 17936997 17477496 18240574 18415978 18359782 19402531 19472368 19548539 19899641 20198868 20459727 21255416
Out of PubMed:
Gorbunov K.Yu., Lyubetsky V.A. New approach for detecting common secondary structures in a set of RNA sequences. Biophysics (Moscow), vol. 48, Suppl. 1 (2003), 2004.
Lyubetsky V.A., Vyugin V.V. Complex phylogenetic analysis of the evolutionary history for some prokaryotes family. Biophysics (Moscow), vol. 48, Suppl. 1 (2003), 2004, p. 97

Publications

  1. Lyubetsky V, Gershgorin R, Gorbunov K. Chromosome structures: reduction of certain problems with unequal gene content and gene paralogs to integer linear programming. BMC Bioinformatics. 2017;18:537 pubmed publisher
    ..The challenges are to reduce the size of the corresponding integer linear programming formulations and to incorporate a more detailed biological concept in our model of the reconstruction. ..
  2. Lyubetsky V, Gershgorin R, Seliverstov A, Gorbunov K. Algorithms for reconstruction of chromosomal structures. BMC Bioinformatics. 2016;17:40 pubmed publisher
    ..The reconstructed evolutionary trees of mitochondrial and plastid chromosomal structures as well as the ancestral states of the structures appear to be reasonable. ..
  3. Zverkov O, Seliverstov A, Lyubetsky V. Regulation of Expression and Evolution of Genes in Plastids of Rhodophytic Branch. Life (Basel). 2016;6: pubmed publisher
    ..A phylogenetic tree of plastids was generated for the rhodophytic branch. The hypothesis of the origin of apicoplasts from the common ancestor of all apicomplexans from plastids of red algae was confirmed. ..
  4. Gershgorin R, Gorbunov K, Zverkov O, Rubanov L, Seliverstov A, Lyubetsky V. Highly Conserved Elements and Chromosome Structure Evolution in Mitochondrial Genomes in Ciliates. Life (Basel). 2017;7: pubmed publisher
    ..We also used the HCE identification to search for promoters and regulatory elements that characterize the functional evolution of the genome. ..

Detail Information

Publications4

  1. Lyubetsky V, Gershgorin R, Gorbunov K. Chromosome structures: reduction of certain problems with unequal gene content and gene paralogs to integer linear programming. BMC Bioinformatics. 2017;18:537 pubmed publisher
    ..The challenges are to reduce the size of the corresponding integer linear programming formulations and to incorporate a more detailed biological concept in our model of the reconstruction. ..
  2. Lyubetsky V, Gershgorin R, Seliverstov A, Gorbunov K. Algorithms for reconstruction of chromosomal structures. BMC Bioinformatics. 2016;17:40 pubmed publisher
    ..The reconstructed evolutionary trees of mitochondrial and plastid chromosomal structures as well as the ancestral states of the structures appear to be reasonable. ..
  3. Zverkov O, Seliverstov A, Lyubetsky V. Regulation of Expression and Evolution of Genes in Plastids of Rhodophytic Branch. Life (Basel). 2016;6: pubmed publisher
    ..A phylogenetic tree of plastids was generated for the rhodophytic branch. The hypothesis of the origin of apicoplasts from the common ancestor of all apicomplexans from plastids of red algae was confirmed. ..
  4. Gershgorin R, Gorbunov K, Zverkov O, Rubanov L, Seliverstov A, Lyubetsky V. Highly Conserved Elements and Chromosome Structure Evolution in Mitochondrial Genomes in Ciliates. Life (Basel). 2017;7: pubmed publisher
    ..We also used the HCE identification to search for promoters and regulatory elements that characterize the functional evolution of the genome. ..