Research Topics

Nicola Palmieri

Summary

Publications

  1. pmc Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura
    Nicola Palmieri
    Institut für Populationsgenetik, Vetmeduni Vienna, Vienna, Austria
    PLoS ONE 7:e46415. 2012
  2. pmc Exploring the gonad transcriptome of two extreme male pigs with RNA-seq
    Anna Esteve-Codina
    Departament de Ciencia Animal i dels Aliments, Universitat Autonoma de Barcelona, 08193 Bellaterra, Spain
    BMC Genomics 12:552. 2011
  3. pmc Genome assembly and annotation of a Drosophila simulans strain from Madagascar
    Nicola Palmieri
    Institut für Populationsgenetik, Vetmeduni Vienna, Veterinarplatz 1, 1210, Wien, Austria
    Mol Ecol Resour 15:372-81. 2015
  4. pmc The life cycle of Drosophila orphan genes
    Nicola Palmieri
    Institut für Populationsgenetik, Vetmeduni Vienna, Vienna, Austria
    elife 3:e01311. 2014

Collaborators

Detail Information

Publications4

  1. pmc Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura
    Nicola Palmieri
    Institut für Populationsgenetik, Vetmeduni Vienna, Vienna, Austria
    PLoS ONE 7:e46415. 2012
    ..Finally, we identified 99 additional new genes that are not represented in the current genome contigs of D. pseudoobscura, probably due to location in genomic regions that are difficult to assemble (e.g. heterochromatic regions)...
  2. pmc Exploring the gonad transcriptome of two extreme male pigs with RNA-seq
    Anna Esteve-Codina
    Departament de Ciencia Animal i dels Aliments, Universitat Autonoma de Barcelona, 08193 Bellaterra, Spain
    BMC Genomics 12:552. 2011
    ..An expression analysis comparing different mapping approaches and detection of allele specific expression is also discussed in this study...
  3. pmc Genome assembly and annotation of a Drosophila simulans strain from Madagascar
    Nicola Palmieri
    Institut für Populationsgenetik, Vetmeduni Vienna, Veterinarplatz 1, 1210, Wien, Austria
    Mol Ecol Resour 15:372-81. 2015
    ..We anticipate that the M252 genome will be a valuable resource for many research questions...
  4. pmc The life cycle of Drosophila orphan genes
    Nicola Palmieri
    Institut für Populationsgenetik, Vetmeduni Vienna, Vienna, Austria
    elife 3:e01311. 2014
    ..DOI: http://dx.doi.org/10.7554/eLife.01311.001. ..