Daniel Chourrout

Summary

Affiliation: University of Bergen
Country: Norway

Publications

  1. ncbi request reprint Minimal ProtoHox cluster inferred from bilaterian and cnidarian Hox complements
    D Chourrout
    Sars International Centre for Marine Molecular Biology, University of Bergen, Thormoehlensgt 55, 5008 Bergen, Norway
    Nature 442:684-7. 2006
  2. doi request reprint Involvement of Prop1 homeobox gene in the early development of fish pituitary gland
    Anna Rita Angotzi
    Sars, International Centre for Marine Molecular Biology, University of Bergen, High Technology Centre, Thormoehlensgt 55, N 5008 Bergen, Norway
    Gen Comp Endocrinol 171:332-40. 2011
  3. ncbi request reprint Remodelling of the homeobox gene complement in the tunicate Oikopleura dioica
    Rolf B Edvardsen
    Sars Centre for Marine Molecular Biology, Bergen High Technology Centre, Thormoehlensgt 55, 5008 Bergen, Norway
    Curr Biol 15:R12-3. 2005
  4. ncbi request reprint Hypervariable and highly divergent intron-exon organizations in the chordate Oikopleura dioica
    Rolf B Edvardsen
    Sars Centre for Marine Molecular Biology, Bergen High Technology Centre, Thormoehlensgt 55, 5020 Bergen, Norway
    J Mol Evol 59:448-57. 2004
  5. doi request reprint Spatio-temporal expression patterns of anterior Hox genes in Atlantic salmon (Salmo salar)
    Sutada Mungpakdee
    Sars International Centre for Marine Molecular Biology, University of Bergen, Thormøhlensgt 55, N 5008 Bergen, Norway
    Gene Expr Patterns 8:508-14. 2008
  6. ncbi request reprint Differential evolution of the 13 Atlantic salmon Hox clusters
    Sutada Mungpakdee
    Sars International Centre for Marine Molecular Biology, University of Bergen, Thormøhlensgt 55, Bergen, Norway
    Mol Biol Evol 25:1333-43. 2008
  7. pmc OikoBase: a genomics and developmental transcriptomics resource for the urochordate Oikopleura dioica
    Gemma Danks
    Computational Biology Unit, University of Bergen, Bergen, N 5008, Norway
    Nucleic Acids Res 41:D845-53. 2013
  8. ncbi request reprint Development of the caudal nerve cord, motoneurons, and muscle innervation in the appendicularian urochordate Oikopleura dioica
    Anne Mette Søviknes
    Sars International Centre for Marine Molecular Biology, University of Bergen, Bergen High Technology Centre, N 5008 Bergen, Norway
    J Comp Neurol 503:224-43. 2007
  9. doi request reprint Independent and dynamic reallocation of pitx gene expression during vertebrate evolution, with emphasis on fish pituitary development
    Anna R Angotzi
    Sars, International Centre for Marine Molecular Biology, University of Bergen, High Technology Centre, Thormoehlensgt 55, N 5008 Bergen, Norway
    Gene 417:19-26. 2008
  10. ncbi request reprint Hox cluster disintegration with persistent anteroposterior order of expression in Oikopleura dioica
    Hee Chan Seo
    Sars Centre for Marine Molecular Biology, Bergen High Technology Centre, Thormøhlensgaten 55, 5008 Bergen, Norway
    Nature 431:67-71. 2004

Collaborators

  • Joel C Glover
  • J Robert Manak
  • Rita Tewari
  • Boris Lenhard
  • U Technau
  • France Denoeud
  • Emmanuelle Lerat
  • R E Steele
  • B Zhu
  • Xianjun Dong
  • Fekadu Yadetie
  • Sutada Mungpakdee
  • Hee Chan Seo
  • Anne Mette Søviknes
  • Anna Rita Angotzi
  • Rolf B Edvardsen
  • Richard Reinhardt
  • Patrick Wincker
  • Gemma Danks
  • Sigurd Stefansson
  • Eric M Thompson
  • Anna R Angotzi
  • Marit F Jensen
  • Marianne Bjordal
  • Jean Weissenbach
  • Hans Lehrach
  • Anne Dorthea Maeland
  • Philippe Ganot
  • Harsha Doddapaneni
  • Raul Petrin
  • Bolei Fu
  • Stephen Butcher
  • Coen Campsteijn
  • Raghu Metpally
  • Mrutyunjaya Parida
  • Rune Male
  • Altuna Akalin
  • Kari Merete Ersland
  • Antoine Mialon
  • Jérôme Cartry
  • Jana Mikhaleva
  • Anette Hansen
  • Torben Kallesøe
  • Marit Flo Jensen
  • Mette Flaat
  • Rolf Brudvik Edvardsen
  • Mette Flåt

Detail Information

Publications13

  1. ncbi request reprint Minimal ProtoHox cluster inferred from bilaterian and cnidarian Hox complements
    D Chourrout
    Sars International Centre for Marine Molecular Biology, University of Bergen, Thormoehlensgt 55, 5008 Bergen, Norway
    Nature 442:684-7. 2006
    ..Consequently, the ProtoHox cluster might have consisted of only two anterior genes. Non-anterior genes could have appeared independently in the Hox and ParaHox clusters, possibly after the separation of bilaterians and cnidarians...
  2. doi request reprint Involvement of Prop1 homeobox gene in the early development of fish pituitary gland
    Anna Rita Angotzi
    Sars, International Centre for Marine Molecular Biology, University of Bergen, High Technology Centre, Thormoehlensgt 55, N 5008 Bergen, Norway
    Gen Comp Endocrinol 171:332-40. 2011
    ....
  3. ncbi request reprint Remodelling of the homeobox gene complement in the tunicate Oikopleura dioica
    Rolf B Edvardsen
    Sars Centre for Marine Molecular Biology, Bergen High Technology Centre, Thormoehlensgt 55, 5008 Bergen, Norway
    Curr Biol 15:R12-3. 2005
    ..elegans , such as loss of several Hox genes and Hox cluster fragmentation . Here we report considerable alterations of the homeobox gene complement in the tunicate lineage...
  4. ncbi request reprint Hypervariable and highly divergent intron-exon organizations in the chordate Oikopleura dioica
    Rolf B Edvardsen
    Sars Centre for Marine Molecular Biology, Bergen High Technology Centre, Thormoehlensgt 55, 5020 Bergen, Norway
    J Mol Evol 59:448-57. 2004
    ..We also speculate that introns placed at gene-specific positions may contribute to suppressing these exchanges and thereby favor their own persistence...
  5. doi request reprint Spatio-temporal expression patterns of anterior Hox genes in Atlantic salmon (Salmo salar)
    Sutada Mungpakdee
    Sars International Centre for Marine Molecular Biology, University of Bergen, Thormøhlensgt 55, N 5008 Bergen, Norway
    Gene Expr Patterns 8:508-14. 2008
    ..However, changes in spatial expression were observed for the ancient fish gene duplicate HoxB3b, while recently duplicated genes showed divergence in their expression levels...
  6. ncbi request reprint Differential evolution of the 13 Atlantic salmon Hox clusters
    Sutada Mungpakdee
    Sars International Centre for Marine Molecular Biology, University of Bergen, Thormøhlensgt 55, Bergen, Norway
    Mol Biol Evol 25:1333-43. 2008
    ..It is particularly high between both HoxBb clusters and both HoxDa clusters, whereas both HoxBa clusters remained virtually identical. Positive selection on the Hox protein-coding sequences could not be detected...
  7. pmc OikoBase: a genomics and developmental transcriptomics resource for the urochordate Oikopleura dioica
    Gemma Danks
    Computational Biology Unit, University of Bergen, Bergen, N 5008, Norway
    Nucleic Acids Res 41:D845-53. 2013
    ..OikoBase will provide a valuable resource for research in chordate development, genome evolution and plasticity and the molecular ecology of this important marine planktonic organism...
  8. ncbi request reprint Development of the caudal nerve cord, motoneurons, and muscle innervation in the appendicularian urochordate Oikopleura dioica
    Anne Mette Søviknes
    Sars International Centre for Marine Molecular Biology, University of Bergen, Bergen High Technology Centre, N 5008 Bergen, Norway
    J Comp Neurol 503:224-43. 2007
    ....
  9. doi request reprint Independent and dynamic reallocation of pitx gene expression during vertebrate evolution, with emphasis on fish pituitary development
    Anna R Angotzi
    Sars, International Centre for Marine Molecular Biology, University of Bergen, High Technology Centre, Thormoehlensgt 55, N 5008 Bergen, Norway
    Gene 417:19-26. 2008
    ..Moreover, ISH analysis of the pitx salmon repertoire shows rapid evolution in this lineage, differences in spatio-temporal expression are observed between gene duplicates...
  10. ncbi request reprint Hox cluster disintegration with persistent anteroposterior order of expression in Oikopleura dioica
    Hee Chan Seo
    Sars Centre for Marine Molecular Biology, Bergen High Technology Centre, Thormøhlensgaten 55, 5008 Bergen, Norway
    Nature 431:67-71. 2004
    ..We propose a relationship between the Hox cluster breakdown, the separation of Hox expression domains, and a transition to a determinative mode of development...
  11. pmc Conservation and divergence of chemical defense system in the tunicate Oikopleura dioica revealed by genome wide response to two xenobiotics
    Fekadu Yadetie
    Sars International Centre for Marine Molecular Biology, University of Bergen, Bergen, Norway
    BMC Genomics 13:55. 2012
    ....
  12. ncbi request reprint Development of putative GABAergic neurons in the appendicularian urochordate Oikopleura dioica
    Anne Mette Søviknes
    Sars International Centre for Marine Molecular Biology, Bergen High Technology Centre, N 5008 Bergen, Norway
    J Comp Neurol 490:12-28. 2005
    ..dioica provide a good model for assessing, at the invertebrate-vertebrate transition, the molecular mechanisms that specify the GABAergic phenotype...
  13. pmc Spliced-leader RNA trans splicing in a chordate, Oikopleura dioica, with a compact genome
    Philippe Ganot
    Sars International Centre for Marine Molecular Biology, Bergen High Technology Centre, Thormøhlensgt 55, N 5008 Bergen, Norway
    Mol Cell Biol 24:7795-805. 2004
    ..Remarkably, intercistronic regions in O. dioica are far more reduced than those in either nematodes or kinetoplastids, implying minimal cis-regulatory elements for coupling of 3'-end formation and trans splicing...