Research Topics
Genomes and Genes
| Anne Lise Børresen-DaleSummaryAffiliation: The Norwegian Radium Hospital Country: Norway Publications
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Detail Information
Publications
Workshop on The Epidemiology of the ATM Gene: Impact on Breast Cancer Risk and Treatment, Present Status and Future Focus, Lillehammer, Norway, 29 June 2002Jonine L Bernstein
Department of Community Medicine, Mount Sinai School of Medicine, New York, USA
Breast Cancer Res 4:249-52. 2002..In the present meeting report, the aims of each project are described...
Discovery and validation of breast cancer subtypesAmy V Kapp
Department of Statistics, Stanford University, Stanford, CA, USA
BMC Genomics 7:231. 2006..The most recent study presented evidence for the existence of five different subtypes: normal breast-like, basal, luminal A, luminal B, and ERBB2+...
ATM variants and cancer risk in breast cancer patients from Southern FinlandJohanna Tommiska
Department of Obstetrics and Gynecology, Helsinki University Central Hospital, Helsinki, Finland
BMC Cancer 6:209. 2006..We also aimed to investigate whether there are other ATM mutations or variants contributing to breast cancer risk in our population...
Distinct choline metabolic profiles are associated with differences in gene expression for basal-like and luminal-like breast cancer xenograft modelsSiver A Moestue
Department of Circulation and Medical Imaging, Norwegian University of Science and Technology NTNU, Trondheim, Norway
BMC Cancer 10:433. 2010..However, underlying mechanisms for the abnormal choline metabolism are poorly understood...
Genetic profiling of breast cancer: from molecular portraits to clinical utilityA L Børresen-Dale
Department of Genetics, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo, Norway
Int J Biol Markers 18:54-6. 2003
TP53 and breast cancerAnne Lise Børresen-Dale
Department of Genetics, Institute for Cancer Research, The University Hospital, The Norwegian Radium Hospital, Montebello, Oslo, Norway
Hum Mutat 21:292-300. 2003..All data available on TP53 mutation analyses of human breast carcinomas, as well data from transgenic animal studies and experimental cell studies, support an important role for TP53 in mammary carcinogenesis...
TP53 and long-term prognosis in colorectal cancer: mutations in the L3 zinc-binding domain predict poor survivalA L Børresen-Dale
Department of Genetics, Norwegian Radium Hospital, Oslo, Norway
Clin Cancer Res 4:203-10. 1998....
The TP53 codon 72 polymorphism may affect the function of TP53 mutations in breast carcinomas but not in colorectal carcinomasAnita Langerød
Department of Genetics, Institute for Cancer Research, The Norwegian Radium Hospital, 0310 Oslo, Norway
Cancer Epidemiol Biomarkers Prev 11:1684-8. 2002..2%) versus 7 in 16 Pro72 homozygous cases (43.8%). These results suggest a selective growth advantage for cells carrying a type of TP53 mutation seen in breast carcinomas when the mutation resides on an Arg72 allele...
Integrated molecular profiles of invasive breast tumors and ductal carcinoma in situ (DCIS) reveal differential vascular and interleukin signalingVessela N Kristensen
Department of Genetics, Institute for Cancer Research, and Cancer Clinic, Oslo University Hospital Radiumhospitalet, 0310 Oslo, Norway
Proc Natl Acad Sci U S A 109:2802-7. 2012..In conclusion, by means of a pathway-based modeling methodology (PARADIGM) integrating different layers of molecular data from whole-tumor samples, we demonstrate that we can stratify immune signatures that predict patient survival...
ABCB1 and GST polymorphisms associated with TP53 status in breast cancerSilje H Nordgard
Department of Genetics, The Norwegian Radium Hospital, University of Oslo, Oslo, Norway
Pharmacogenet Genomics 17:127-36. 2007..The goal of this study was to characterize the genetic variation in the ABCB1, GSTM1, GSTT1 and GSTP1 genes, as well as the haplotype structure in the ABCB1 gene...
Combining gene signatures improves prediction of breast cancer survivalXi Zhao
Department of Genetics, Institute for Cancer Research, Oslo University Hospital, Radiumhospitalet, Oslo, Norway
PLoS ONE 6:e17845. 2011..Gene sets from eleven previously published gene signatures are included in the study...
Gene expression profiles of breast biopsies from healthy women identify a group with claudin-low featuresVilde D Haakensen
Dept of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Norway
BMC Med Genomics 4:77. 2011..Increased understanding of the variability in normal breast biology will enable us to identify mechanisms of breast cancer initiation and the origin of different subtypes, and to better predict breast cancer risk...
Serum estradiol levels associated with specific gene expression patterns in normal breast tissue and in breast carcinomasVilde D Haakensen
Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Oslo, Norway
BMC Cancer 11:332. 2011..High serum levels of estradiol are associated with increased risk of postmenopausal breast cancer. Little is known about the gene expression in normal breast tissue in relation to levels of circulating serum estradiol...
Genes harbouring susceptibility SNPs are differentially expressed in the breast cancer subtypesSilje H Nordgard
Department of Genetics, Institute of Cancer Research, Rikshospitalet Radiumhospitalet Medical Centre, Montebello, N 0310 Oslo, Norway
Breast Cancer Res 9:113. 2007....
Gene expression profiling of breast cancer in relation to estrogen receptor status and estrogen-metabolizing enzymes: clinical implicationsVessela N Kristensen
Department of Genetics, Institute of Cancer Research, Norwegian Radium Hospital, Montebello, Oslo, Norway
Clin Cancer Res 11:878s-83s. 2005..Using significance analysis of microarrays, we identified 298 genes significantly differently expressed between partial response and progressive disease groups...
Microarray analysis of the transcriptional response to single or multiple doses of ionizing radiation in human subcutaneous fibroblastsOlaug Kristin Rødningen
Department of Genetics, Institute of Cancer Research, Faculty Division, The Norwegian Radium Hospital, University of Oslo, Norway
Radiother Oncol 77:231-40. 2005....
Allele-specific disparity in breast cancerFatemeh Kaveh
Department of Genetics, Institute for Cancer Research, Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway
BMC Med Genomics 4:85. 2011..We focus on the disparity of CNAs in tumour samples, which were compared to those in blood in order to identify the directional loss of heterozygosity...
TP53 mutation status and gene expression profiles are powerful prognostic markers of breast cancerAnita Langerød
Department of Genetics, Institute for Cancer Research, Rikshospitalet Radiumhospitalet Medical Center, Oslo, Norway N 0310
Breast Cancer Res 9:R30. 2007....
Assessment of rare BRCA1 and BRCA2 variants of unknown significance using hierarchical modelingMarinela Capanu
Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Genet Epidemiol 35:389-97. 2011..Hierarchical modeling is a strategy that has promise for interpreting the evidence from future association studies that involve sequencing of known or suspected cancer genes...
Ischemia caused by time to freezing induces systematic microRNA and mRNA responses in cancer tissueEldrid Borgan
Department of Genetics, Institute of Cancer Research, Oslo University Hospital, Radiumhospitalet, Oslo, Norway
Mol Oncol 5:564-76. 2011..The induced miRNAs may play both direct and indirect roles in biological responses. Caution should be taken when the miRNAs and mRNAs reported to be affected by ischemia time are included in a prognostic or predictive signature...
Designing and implementing quality control for multi-center screening of mutations in the ATM gene among women with breast cancerJonine L Bernstein
Department of Community and Preventive Medicine, Mount Sinai School of Medicine, New York, New York 10029, USA
Hum Mutat 21:542-50. 2003..Finally, we report novel mutations in the ATM gene identified both in patients with ataxia-telangiectasia and in patients with unilateral or bilateral breast cancer...
Distinct molecular mechanisms underlying clinically relevant subtypes of breast cancer: gene expression analyses across three different platformsTherese Sørlie
Department of Genetics, Institute for Cancer Research, Rikshospitalet Radiumhospitalet Medical Center, N 0310 Oslo, Norway
BMC Genomics 7:127. 2006..To further validate and more thoroughly characterize these two subtypes at the molecular level in tumors at an early stage, we report a gene expression profiling study using three different DNA microarray platforms...
Blood gene expression profiling of breast cancer survivors experiencing fibrosisHege Landmark-Høyvik
Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Institute for Clinical Medicine, University of Oslo, Oslo, Norway
Int J Radiat Oncol Biol Phys 79:875-83. 2011....
Molecular diversity in ductal carcinoma in situ (DCIS) and early invasive breast cancerAslaug Aamodt Muggerud
Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Montebello, 0310 Oslo, Norway
Mol Oncol 4:357-68. 2010....
Frequent aberrant DNA methylation of ABCB1, FOXC1, PPP2R2B and PTEN in ductal carcinoma in situ and early invasive breast cancerAslaug Aa Muggerud
Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Montebello, Oslo, N 0310, Norway
Breast Cancer Res 12:R3. 2010....
Multilocus analysis of SNP and metabolic data within a given pathwayVessela N Kristensen
Department of Genetics, Institute of Cancer Research, The Norwegian Radium Hospital, 0310 Oslo, Norway
BMC Genomics 7:5. 2006..One of the greatest challenges facing human geneticists is the identification and characterization of susceptibility genes for common multifactorial diseases and their association to different quantitative phenotypic traits...
Study design: evaluating gene-environment interactions in the etiology of breast cancer - the WECARE studyJonine L Bernstein
Department of Community and Preventive Medicine, Mount Sinai School of Medicine, New York, NY, USA
Breast Cancer Res 6:R199-214. 2004..Three genes (ATM, BRCA1, and BRCA2) encode products that are essential for the normal cellular response to DSBs, but predispose to breast cancer when mutated...
In silico ascription of gene expression differences to tumor and stromal cells in a model to study impact on breast cancer outcomeSimen Myhre
Department of Genetics, Institute for Cancer Research, Division of Surgery and Cancer, Oslo University Hospital Radiumhospitalet, Oslo, Norway
PLoS ONE 5:e14002. 2010..These findings were confirmed in gene expression data from the representative compartments from microdissected breast tissue. The method described was also found to be robust to different histopathological procedures...
Gene expression profiling of peripheral blood cells for early detection of breast cancerJørgen Aarøe
Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Montebello, Oslo, NO 0310, Norway
Breast Cancer Res 12:R7. 2010..The aim of the present study was to refine these findings using a larger sample size and a commercially available microarray platform...
Evaluation of MetriGenix custom 4D arrays applied for detection of breast cancer subtypesAslaug Aamodt Muggerud
Department of Genetics, Faculty Division, The Norwegian Radium Hospital, University of Oslo, N 0310 Oslo, Norway
BMC Cancer 6:59. 2006..A new MetriGenix 4D array proposed for diagnostic use was evaluated...
BRCA1 mutation screening using restriction endonuclease fingerprinting-single-strand conformation polymorphism in an automated capillary electrophoresis systemPedro Kringen
Department of Medical Genetics, Ulleval University Hospital, Oslo, Norway
Electrophoresis 23:4085-91. 2002..The novel strategy allows high-throughput mutation scanning without radioactive labeling and polyacrylamide gel electrophoresis (PAGE)...
Expression of full-length p53 and its isoform Deltap53 in breast carcinomas in relation to mutation status and clinical parametersLars O Baumbusch
Department of Genetics, Institute for Cancer Research, Rikshospitalet Radiumhospitalet Medical Center, 0310 Oslo, Norway
Mol Cancer 5:47. 2006..The tumor suppressor gene p53 (TP53) controls numerous signaling pathways and is frequently mutated in human cancers. Novel p53 isoforms suggest alternative splicing as a regulatory feature of p53 activity...
Linear and non-linear dependencies between copy number aberrations and mRNA expression reveal distinct molecular pathways in breast cancerHiroko K Solvang
Department of Genetics, Institute for Cancer Research, Oslo University Hospital, Radiumhospitalet, Montebello, and Department of Biostatistics, Institute of Basic Medical Science, University of Oslo, 0310 Oslo, Norway
BMC Bioinformatics 12:197. 2011..Here, we propose a statistical approach to investigate and distinguish between linear and nonlinear dependences between DNA copy number alteration and mRNA expression...
Experimental validation of data mined single nucleotide polymorphisms from several databases and consecutive dbSNP buildsHege Edvardsen
Department of Genetics, Institute for Cancer Research, The Norwegian Radium Hospital, Faculty Division of the University of Oslo, Oslo, Norway
Pharmacogenet Genomics 16:207-17. 2006..The selected genotypes represent a valuable set of verified candidate SNPs for pharmacogenetic studies in Caucasian populations...
Genome-wide analysis identifies 16q deletion associated with survival, molecular subtypes, mRNA expression, and germline haplotypes in breast cancer patientsSilje H Nordgard
Department of Genetics, Institute for Cancer Research, Norwegian Radium Hospital, Rikshospitalet University Hospital, Oslo, Norway
Genes Chromosomes Cancer 47:680-96. 2008..The genes where these SNPs reside encode proteins involved in the extracellular matrix (CHST3 and SPOCK2), in regulation of the cell cycle (JMY, PTPRN2, and Cwf19L2) and chromosome stability (KPNB1)...
Allele-specific copy number analysis of tumorsPeter Van Loo
Department of Genetics, Institute for Cancer Research, Clinic for Cancer and Surgery, Oslo University Hospital, Montebello, N 0310 Oslo, Norway
Proc Natl Acad Sci U S A 107:16910-5. 2010..We hypothesize that these alternative alleles have a different influence on breast carcinoma development...
The genetics and epigenetics of fatigueHege Landmark-Høyvik
Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Oslo, Montebello, Norway
PM R 2:456-65. 2010....
miRNA-mRNA integrated analysis reveals roles for miRNAs in primary breast tumorsEspen Enerly
Division of Surgery and Cancer, Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Oslo, Norway
PLoS ONE 6:e16915. 2011..In this study we present and analyze data derived from expression profiling of 799 miRNAs in 101 primary human breast tumors, along with genome-wide mRNA profiles and extensive clinical information...
Expression levels of uridine 5'-diphospho-glucuronosyltransferase genes in breast tissue from healthy women are associated with mammographic densityVilde D Haakensen
Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Oslo, Montebello, NO 0310, Norway
Breast Cancer Res 12:R65. 2010..However, the biologic correlates of density are little known...
BUB1 infrequently mutated in human breast carcinomasAnita Langerød
Dep of Genetics, Inst for Cancer Research, The Norwegian Radium Hospital, Montebello, N 0310 Oslo, Norway
Hum Mutat 22:420. 2003..No somatic mutations were detected. These results indicate that genomic instability scored as copy number alterations by CGH in TP53 wild type breast carcinomas is not caused by somatic mutations in the BUB1 gene...
Mutation screening of the TP53 gene by temporal temperature gradient gel electrophoresisTherese Sørlie
Department of Genetics, The Norwegian Radium Hospital, Oslo, Norway
Methods Mol Biol 291:207-16. 2005..The result is a rapid and sensitive screening technique that is robust and easily set up in smaller laboratory environments...
Radiation-induced effects on gene expression: an in vivo study on breast cancerAslaug Helland
Department of Genetics, Institute for Cancer Research, Rikshospitalet Radiumhospitalet Medical Center, Oslo, Norway
Radiother Oncol 80:230-5. 2006..The purpose of this study was to investigate the molecular basis underlying response to radiotherapy in breast cancer tissue...
PIK3CA mutations in advanced ovarian carcinomasYun Wang
Department of Gynecologic Oncology, The Norwegian Radium Hospital, N 0310, Oslo, Norway
Hum Mutat 25:322. 2005..Two of the cases with mutations were mucinous and clear cell tumors, suggesting that PIK3CA mutations are more common in these rare histological types...
Glycan gene expression signatures in normal and malignant breast tissue; possible role in diagnosis and progressionIvan O Potapenko
Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, 0310 Oslo, Norway
Mol Oncol 4:98-118. 2010....
Effects of anastrozole on the intratumoral gene expression in locally advanced breast cancerVessela Nedelcheva Kristensen
Department of Genetics, Institute for Cancer Research, Norwegian Radium Hospital, Montebello 0310, Oslo, Norway
J Steroid Biochem Mol Biol 95:105-11. 2005..Using significance analysis of microarrays (SAM), we identified 298 genes significantly differently expressed between the partial response and progressive disease groups...
Genomic architecture characterizes tumor progression paths and fate in breast cancer patientsHege G Russnes
Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, 0310 Oslo, Norway
Sci Transl Med 2:38ra47. 2010..This study emphasizes the relation among structural genomic alterations, molecular subtype, and clinical behavior and shows that objective score of genomic complexity (CAAI) is an independent prognostic marker in breast cancer...
Early detection of breast cancer based on gene-expression patterns in peripheral blood cellsPraveen Sharma
DiaGenic ASA, Oslo, Norway
Breast Cancer Res 7:R634-44. 2005..In this study, we investigated whether early detection of breast cancer is possible by analyzing gene-expression patterns in peripheral blood cells...
Germline glutathione S-transferase variants in breast cancer: relation to diagnosis and cutaneous long-term adverse effects after two fractionation patterns of radiotherapyHege Edvardsen
Department of Genetics, Institute for Cancer Research, Rikshospitalet Radiumhospitalet Medical Centre, Oslo, Norway
Int J Radiat Oncol Biol Phys 67:1163-71. 2007..To explore whether certain glutathione S-transferase (GST) polymorphisms are associated with an increased risk of breast cancer or the level of radiation-induced adverse effects after two fractionation patterns of adjuvant radiotherapy...
High-resolution analyses of copy number changes in disseminated tumor cells of patients with breast cancerRandi R Mathiesen
Department of Genetics, Oslo University Hospital Radiumhospitalet, Oslo, Norway
Int J Cancer 131:E405-15. 2012..Similar aberration patterns were visible in DTCs collected at diagnosis and at 3 years relapse-free follow-up. SCaCGH may be a powerful tool for the molecular characterization of DTCs...
Merging transcriptomics and metabolomics--advances in breast cancer profilingEldrid Borgan
Department of Genetics, Institute for Cancer Research, Division of Surgery and Cancer, Oslo University Hospital Radiumhospitalet, Oslo, Norway
BMC Cancer 10:628. 2010..The aim of this study was to explore the potential of combining these two different types of information...
Methylation profiling with a panel of cancer related genes: association with estrogen receptor, TP53 mutation status and expression subtypes in sporadic breast cancerJo Anders Rønneberg
Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Oslo, Norway
Mol Oncol 5:61-76. 2011..Some of the transcription factors identified, with key roles in differentiation and development might play a role in inducing and maintaining the different phenotypes...
Pathway based analysis of SNPs with relevance to 5-FU therapy: relation to intratumoral mRNA expression and survivalSilje H Nordgard
Department of Genetics, Institute for Cancer Research, Rikshospitalet Radiumhospitalet Medical Center, Montebello, Oslo, Norway
Int J Cancer 123:577-85. 2008..These data suggest that 3 copies of the TYMS 5'UTR repeat may give a treatment specific reduced survival in breast cancer patients, and that TP53 may have a direct, allele specific, role in 5-FU mediated response...
Oncogenic aberrations in the p53 pathway are associated with a high S phase fraction and poor patient survival in B-cell Non-Hodgkin's lymphomaT Stokke
Department of Biophysics, The Norwegian Radium Hospital, Montebello, Oslo, Norway
Int J Cancer 89:313-24. 2000..003). Apoptotic fractions were similar in all these groups (p=0.09). Multivariate analysis showed that the presence of TP53/p53 aberrations is a strong and independent prognostic parameter in B-cell Non-Hodgkin's lymphoma...
The APC gene I1307K variant is rare in Norwegian patients with familial and sporadic colorectal or breast cancerR A Lothe
Department of Genetics, The Norwegian Radium Hospital, Oslo
Cancer Res 58:2923-4. 1998..Our data show that the I1307K variant is rare in the Norwegian population and should not be viewed as a candidate for susceptibility testing for colorectal cancer...
Mutant p53 disrupts mammary tissue architecture via the mevalonate pathwayWilliam A Freed-Pastor
Department of Biological Sciences, Columbia University, New York, NY 10027, USA
Cell 148:244-58. 2012..Finally, p53 mutation correlates with highly expressed sterol biosynthesis genes in human breast tumors. These findings implicate the mevalonate pathway as a therapeutic target for tumors bearing mutations in p53...
X chromosome inactivation in cervical cancer patientsMarianne Kristiansen
Department of Medical Genetics, Rikshospitalet, Oslo, Norway
Cancer Genet Cytogenet 146:73-6. 2003..03). Our results indicate that if X-inactivation analysis is to be used in clonality studies of cervical cancers, it is essential to consider both the age and the X-inactivation pattern in blood cells...
Deregulation of MYCN, LIN28B and LET7 in a molecular subtype of aggressive high-grade serous ovarian cancersAslaug Helland
Division of Surgery and Cancer, Department of Genetics, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Oslo, Norway
PLoS ONE 6:e18064. 2011..By defining the drivers of a molecular subtype of serous ovarian cancers we provide a novel strategy for targeted therapeutic intervention...
Radiation-induced gene expression in human subcutaneous fibroblasts is predictive of radiation-induced fibrosisOlaug Kristin Rødningen
Department of Genetics, Institute of Cancer Research, Rikshospitalet Radiumhospitalet Medical Centre, Oslo, Norway
Radiother Oncol 86:314-20. 2008..Our aim was to identify basal and radiation-induced transcriptional profiles in fibroblasts from breast cancer patients that might be related to the individual risk of RIF in these patients...
Single tube multiplex polymerase chain reaction genotype analysis of GSTM1, GSTT1 and GSTP1: relation of genotypes to TP53 tumor status and clinicopathological variables in breast cancer patientsV Nedelcheva Kristensen
Department of Genetics, Institute of Cancer Research, Norwegian Radium Hospital, Montebello
Pharmacogenetics 8:441-7. 1998..05). Patients who were homozygous for the deleted GSTM1 allele were found to have a significantly shorter overall survival (P = 0.036)...
Screening for ESR mutations in breast and ovarian cancer patientsT I Anderson
Department of Genetics, Norwegian Radnon Hospital, Oslo, Norway
Hum Mutat 9:531-6. 1997....
CAMK1D amplification implicated in epithelial-mesenchymal transition in basal-like breast cancerAnna Bergamaschi
Department of Genetics, Institute for Cancer Research, Rikshospitalet Radiumhospitalet Medical Center, Oslo, Norway
Mol Oncol 2:327-39. 2008..Our findings identify CAMK1D as a novel amplified oncogene linked to EMT in breast cancer, and as a potential therapeutic target with particular relevance to clinically unfavorable basal-like tumors...
GSTP1 promoter haplotypes affect DNA methylation levels and promoter activity in breast carcinomasJo Anders Rønneberg
Department of Genetics, The Norwegian Radium Hospital, Rikshospitalet University Hospital, Montebello, Oslo, Norway
Cancer Res 68:5562-71. 2008..GSTP1 expression was moderately but significantly (P = 0.01) reduced after siRNA-mediated knockdown of c-Myb. Our results indicate that haplotype structure of a promoter is important for the extent of DNA methylation...
Found in transcription: gene expression and other novel blood biomarkers for the early detection of breast cancerAnders Lönneborg
DiaGenic ASA, Oslo, Norway
Expert Rev Anticancer Ther 9:1115-23. 2009..These novel biomarkers and their potential use will be presented and discussed in this review, with special emphasis on gene expression-based markers...
Constant denaturant gel electrophoresis (CDGE) in BRCA1 mutation screeningT I Andersen
Department of Genetics, Institute for Cancer Research, Norwegian Radium Hospital, Oslo
Hum Mutat 11:166-74. 1998..CDGE may become an efficient tool in diagnostic and population based screening for BRCA1 mutations...
CYP17 and breast cancer risk: the polymorphism in the 5' flanking area of the gene does not influence binding to Sp-1V Nedelcheva Kristensen
Department of Genetics, Institute of Cancer Research, The Norwegian Radium Hospital, University Clinic, Oslo
Cancer Res 59:2825-8. 1999..Age at onset, tumor grade, lymph node status and distant metastases, stage, and estrogen and progesterone receptor status were not associated with the CYP17 genotype...
Different genetic pathways to proximal and distal colorectal cancer influenced by sex-related factorsJ Breivik
Department of Immunology, Institute of Cancer Research, The Norwegian Radium Hospital, Oslo
Int J Cancer 74:664-9. 1997..0001). Our data confirm that different genetic pathways to colorectal cancer dominate in the proximal and distal segments of the bowel and suggest that the K-ras- and MIN-dependent pathways are influenced by different sex-related factors...
Automated constant denaturant capillary electrophoresis applied for detection of KRAS exon 1 mutationsJ Bjørheim
Department of Immunology, Section for Immunotherapy, Institute for Cancer Research, The Norwegian Radium Hospital, Montebello, 0310 Oslo, Norway
Biotechniques 30:972-5. 2001..6% in this automated CDCE technique. The automation of CDCE allowed rapid analysis of a large number of test samples over as short period of time and with a commercially available apparatus...
Extracellular matrix signature identifies breast cancer subgroups with different clinical outcomeA Bergamaschi
Department of Genetics, Institute for Cancer Research, Rikshospitalet Radiumhospitalet Medical Centre, Montebello, Oslo, Norway
J Pathol 214:357-67. 2008....
Identical mutation in 55% of the ATM alleles in 11 Norwegian AT families: evidence for a founder effectK Laake
Department of Genetics, Norwegian Radium Hospital, Montebello, Oslo, Norway
Eur J Hum Genet 6:235-44. 1998..The prevalence of this mutation in Norwegian patients now allows a major subset of AT heterozygotes to be identified, both in the general population and in breast cancer patients, so that their cancer risk can be evaluated...
High-throughput methods for detection of genetic variationV N Kristensen
Institute for Cancer Research, Norwegian Radium Hospital, Montebello 0310, Oslo, Norway
Biotechniques 30:318-22, 324, 326 passim. 2001..The most frequently used techniques and instrumental settings applied in different combinations are described, and other methods that are less broadly used but have interesting potentials are discussed...
Comparison of the Agilent, ROMA/NimbleGen and Illumina platforms for classification of copy number alterations in human breast tumorsL O Baumbusch
Department of Genetics, Institute for Cancer Research, Norwegian Radium Hospital, Rikshospitalet University Hospital, 0310 Oslo, Norway
BMC Genomics 9:379. 2008..Various platforms, brands and underlying technologies are available, facing the user with many choices regarding platform sensitivity and number, localization, and density distribution of probes...
Evaluation of arrayed primer extension for TP53 mutation detection in breast and ovarian carcinomasPedro Kringen
The Norwegian Radium Hospital, Oslo, Norway
Biotechniques 39:755-61. 2005..5% for sense and/or antisense strand. We conclude that the APEX TP53 microarray is a robust, rapid, and comprehensive screening tool for sequence alterations in tumors...
Genetic variation in putative regulatory loci controlling gene expression in breast cancerVessela N Kristensen
Department of Genetics, Institute of Cancer Research, Rikshospitalet-Radiumhospitalet Medical Center, Montebello, 0310 Oslo, Norway
Proc Natl Acad Sci U S A 103:7735-40. 2006..It provides the statistical framework for further genotype expression correlation studies in cancer data sets...
Distinct patterns of DNA copy number alteration are associated with different clinicopathological features and gene-expression subtypes of breast cancerAnna Bergamaschi
Department of Genetics, Institute for Cancer Research, Rikshospitalet-Radiumhospitalet Medical Center, Oslo, Norway
Genes Chromosomes Cancer 45:1033-40. 2006..This article contains Supplementary Material available at http://www.interscience.wiley.com/jpages/1045-2257/suppmat..
