M D Woodhams

Summary

Affiliation: Massey University
Country: New Zealand

Publications

  1. ncbi request reprint Reconstructing phylogeny by quadratically approximated maximum likelihood
    M D Woodhams
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand
    Bioinformatics 20:i348-54. 2004
  2. ncbi request reprint Can deleterious mutations explain the time dependency of molecular rate estimates?
    Michael Woodhams
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, New Zealand
    Mol Biol Evol 23:2271-3. 2006
  3. pmc RNase MRP and the RNA processing cascade in the eukaryotic ancestor
    Michael D Woodhams
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand
    BMC Evol Biol 7:S13. 2007
  4. pmc Modelling mitochondrial site polymorphisms to infer the number of segregating units and mutation rate
    Michael D Hendy
    Allan Wilson Centre, Massey University, Palmerston North 4474, New Zealand
    Biol Lett 5:397-400. 2009
  5. pmc Mutation and evolutionary rates in adélie penguins from the antarctic
    Craig D Millar
    Allan Wilson Centre for Molecular Ecology and Evolution, School of Biological Sciences, University of Auckland, Auckland, New Zealand
    PLoS Genet 4:e1000209. 2008

Collaborators

Detail Information

Publications5

  1. ncbi request reprint Reconstructing phylogeny by quadratically approximated maximum likelihood
    M D Woodhams
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand
    Bioinformatics 20:i348-54. 2004
    ..The derivation depends on Hadamard conjugation, and hence is limited to the simple symmetric models of Kimura and of Jukes and Cantor. Preliminary testing has demonstrated the accuracy of QAML is close to that of ML...
  2. ncbi request reprint Can deleterious mutations explain the time dependency of molecular rate estimates?
    Michael Woodhams
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, New Zealand
    Mol Biol Evol 23:2271-3. 2006
    ..These limits are high and get higher if additional reasonable assumptions are made. This casts doubt on whether deleterious mutations are able to explain the apparent rate acceleration...
  3. pmc RNase MRP and the RNA processing cascade in the eukaryotic ancestor
    Michael D Woodhams
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand
    BMC Evol Biol 7:S13. 2007
    ....
  4. pmc Modelling mitochondrial site polymorphisms to infer the number of segregating units and mutation rate
    Michael D Hendy
    Allan Wilson Centre, Massey University, Palmerston North 4474, New Zealand
    Biol Lett 5:397-400. 2009
    ..This estimate of mu(m) was found to be consistent with earlier estimates from ancient DNA analysis...
  5. pmc Mutation and evolutionary rates in adélie penguins from the antarctic
    Craig D Millar
    Allan Wilson Centre for Molecular Ecology and Evolution, School of Biological Sciences, University of Auckland, Auckland, New Zealand
    PLoS Genet 4:e1000209. 2008
    ..53 and 1.17). Importantly, the latter rate is not statistically different from our estimate of the mutation rate. These results are in contrast to the view that molecular rates are time dependent...