Claudia Voelckel

Summary

Affiliation: Massey University
Country: New Zealand

Publications

  1. pmc Chips and tags suggest plant-environment interactions differ for two alpine Pachycladon species
    Claudia Voelckel
    Institute of Molecular Biosciences, Massey University, Palmerston North, New Zealand
    BMC Genomics 13:322. 2012
  2. doi request reprint Transcriptional and biochemical signatures of divergence in natural populations of two species of New Zealand alpine Pachycladon
    C Voelckel
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Private Bag 11 222, Palmerston North 4442, New Zealand
    Mol Ecol 17:4740-53. 2008
  3. pmc Within and between whorls: comparative transcriptional profiling of Aquilegia and Arabidopsis
    Claudia Voelckel
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand
    PLoS ONE 5:e9735. 2010
  4. pmc Transcript and protein profiling identify candidate gene sets of potential adaptive significance in New Zealand Pachycladon
    Claudia Voelckel
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand
    BMC Evol Biol 10:151. 2010
  5. pmc Cutoffs and k-mers: implications from a transcriptome study in allopolyploid plants
    Nicole Gruenheit
    Institute of Molecular Biosciences, Massey University, Palmerston North, New Zealand
    BMC Genomics 13:92. 2012
  6. ncbi request reprint An approach to transcriptome analysis of non-model organisms using short-read sequences
    Lesley J Collins
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand
    Genome Inform 21:3-14. 2008
  7. pmc De novo sequence assembly and characterisation of a partial transcriptome for an evolutionarily distinct reptile, the tuatara (Sphenodon punctatus)
    Hilary C Miller
    Allan Wilson Centre for Molecular Ecology and Evolution, School of Biological Sciences, Victoria University of Wellington, PO Box 600, Wellington 6140, New Zealand
    BMC Genomics 13:439. 2012

Detail Information

Publications7

  1. pmc Chips and tags suggest plant-environment interactions differ for two alpine Pachycladon species
    Claudia Voelckel
    Institute of Molecular Biosciences, Massey University, Palmerston North, New Zealand
    BMC Genomics 13:322. 2012
    ..We validate biological inferences against earlier microarray analyses...
  2. doi request reprint Transcriptional and biochemical signatures of divergence in natural populations of two species of New Zealand alpine Pachycladon
    C Voelckel
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Private Bag 11 222, Palmerston North 4442, New Zealand
    Mol Ecol 17:4740-53. 2008
    ..Our findings, in contrast to expectations for evolution of the New Zealand flora, suggest that biotic drivers, such as plant-herbivore interactions, are likely to be as important as abiotic drivers in the diversification of Pachycladon...
  3. pmc Within and between whorls: comparative transcriptional profiling of Aquilegia and Arabidopsis
    Claudia Voelckel
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand
    PLoS ONE 5:e9735. 2010
    ..There are two whorls of petaloid organs, the outer whorl of sepals and the second whorl of petals that form nectar spurs, as well as a recently evolved fifth whorl of staminodia inserted between stamens and carpels...
  4. pmc Transcript and protein profiling identify candidate gene sets of potential adaptive significance in New Zealand Pachycladon
    Claudia Voelckel
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand
    BMC Evol Biol 10:151. 2010
    ..We compare transcript and protein profiling and evaluate their predictive value for inferring glucosinolate chemotypes characteristic of these species...
  5. pmc Cutoffs and k-mers: implications from a transcriptome study in allopolyploid plants
    Nicole Gruenheit
    Institute of Molecular Biosciences, Massey University, Palmerston North, New Zealand
    BMC Genomics 13:92. 2012
    ..The divergence of duplicated genes following WGD creates near identical homeologues that can be problematic for de novo assembly and also reference based assembly protocols that use short reads (35 - 100 bp)...
  6. ncbi request reprint An approach to transcriptome analysis of non-model organisms using short-read sequences
    Lesley J Collins
    Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand
    Genome Inform 21:3-14. 2008
    ..Our approach demonstrates that transcriptome analysis using high-throughput short-read sequencing need not be restricted to the genomes of model organisms...
  7. pmc De novo sequence assembly and characterisation of a partial transcriptome for an evolutionarily distinct reptile, the tuatara (Sphenodon punctatus)
    Hilary C Miller
    Allan Wilson Centre for Molecular Ecology and Evolution, School of Biological Sciences, Victoria University of Wellington, PO Box 600, Wellington 6140, New Zealand
    BMC Genomics 13:439. 2012
    ..We aimed to address this by assembling a transcriptome for tuatara from an early-stage embryo, which will provide a resource for genome annotation, molecular marker development and studies of development and adaptation in tuatara...