Mario Tyago Murakami

Summary

Publications

  1. pmc Two structurally discrete GH7-cellobiohydrolases compete for the same cellulosic substrate fiber
    Fernando Segato
    Department of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, USA
    Biotechnol Biofuels 5:21. 2012
  2. pmc The small heat shock proteins from Acidithiobacillus ferrooxidans: gene expression, phylogenetic analysis, and structural modeling
    Daniela A Ribeiro
    Center for Molecular Biology and Genetic Engineering CBMEG, State University of Campinas UNICAMP, Candido Rondon Avenue 400, 13083 875 Campinas, SP, Brazil
    BMC Microbiol 11:259. 2011
  3. doi request reprint The repeat domain of the type III effector protein PthA shows a TPR-like structure and undergoes conformational changes upon DNA interaction
    Mario Tyago Murakami
    Laboratório Nacional de Biociências, Centro Nacional de Pesquisa em Energia e Materiais, 13083 970, Campinas, SP, Brazil
    Proteins 78:3386-95. 2010
  4. ncbi request reprint The accessory domain changes the accessibility and molecular topography of the catalytic interface in monomeric GH39 β-xylosidases
    Camila Ramos Santos
    Laboratório Nacional de Biociências LNBio, Centro Nacional de Pesquisa em Energia e Materiais, Rua giuseppe maximo scolfaro, 10000, Campinas SP 13083 970, Brazil
    Acta Crystallogr D Biol Crystallogr 68:1339-45. 2012
  5. pmc A redox 2-Cys mechanism regulates the catalytic activity of divergent cyclophilins
    Bruna Medéia Campos
    Laboratório Nacional de Biociências, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP CP6192, Brazil
    Plant Physiol 162:1311-23. 2013
  6. doi request reprint Molecular insights into substrate specificity and thermal stability of a bacterial GH5-CBM27 endo-1,4-β-D-mannanase
    Camila Ramos dos Santos
    Laboratório Nacional de Biociências, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP, Brazil
    J Struct Biol 177:469-76. 2012

Collaborators

  • Bruna Medéia Campos
  • Camila Ramos Santos
  • Camila Ramos dos Santos
  • Fernando Segato
  • Daniela A Ribeiro
  • Tatiana de Arruda Campos Brasil de Souza
  • Sara Britt Marie Whittaker
  • Carlos Alberto Perez
  • Mariane Noronha Domingues
  • João Alexandre Ribeiro Gonçalvez Barbosa
  • Celso Eduardo Benedetti
  • Ana Carolina de Matos Zeri
  • Andre Luis Berteli Ambrosio
  • Mauricio Luis Sforça
  • Adriana Franco Paes Leme
  • Andrew J Mort
  • Thiago Augusto Gonçalves
  • Rita de Cássia Garcia Simão
  • André R L Damásio
  • Thabata Maria Alvarez
  • Joice Helena Paiva
  • Juliana Moço Corrêa
  • Carla Cristina Polo
  • Flavio Augusto Vicente Seixas
  • Fabio M Squina
  • Mariadelourdestm Polizeli
  • Rolf A Prade
  • Fabio Marcio Squina
  • Roberto Ruller
  • Junio Cota
  • Rolf Alexander Prade
  • Andreia Navarro Meza
  • Laura M M Ottoboni
  • Renato Vicentini
  • Luiz E V Del Bem
  • Lucio F C Ferraz

Detail Information

Publications6

  1. pmc Two structurally discrete GH7-cellobiohydrolases compete for the same cellulosic substrate fiber
    Fernando Segato
    Department of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, USA
    Biotechnol Biofuels 5:21. 2012
    ..abstract:..
  2. pmc The small heat shock proteins from Acidithiobacillus ferrooxidans: gene expression, phylogenetic analysis, and structural modeling
    Daniela A Ribeiro
    Center for Molecular Biology and Genetic Engineering CBMEG, State University of Campinas UNICAMP, Candido Rondon Avenue 400, 13083 875 Campinas, SP, Brazil
    BMC Microbiol 11:259. 2011
    ....
  3. doi request reprint The repeat domain of the type III effector protein PthA shows a TPR-like structure and undergoes conformational changes upon DNA interaction
    Mario Tyago Murakami
    Laboratório Nacional de Biociências, Centro Nacional de Pesquisa em Energia e Materiais, 13083 970, Campinas, SP, Brazil
    Proteins 78:3386-95. 2010
    ..The results point to a model in which the RD2 structure changes its compactness as it embraces the DNA with the polymorphic diresidues facing the interior of the superhelix oriented toward the nucleotide bases...
  4. ncbi request reprint The accessory domain changes the accessibility and molecular topography of the catalytic interface in monomeric GH39 β-xylosidases
    Camila Ramos Santos
    Laboratório Nacional de Biociências LNBio, Centro Nacional de Pesquisa em Energia e Materiais, Rua giuseppe maximo scolfaro, 10000, Campinas SP 13083 970, Brazil
    Acta Crystallogr D Biol Crystallogr 68:1339-45. 2012
    ..These interactions also maintain the accessory domain tightly linked to the catalytic core, which may be important for enzyme function and stability...
  5. pmc A redox 2-Cys mechanism regulates the catalytic activity of divergent cyclophilins
    Bruna Medéia Campos
    Laboratório Nacional de Biociências, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP CP6192, Brazil
    Plant Physiol 162:1311-23. 2013
    ..This suggests a new type of allosteric regulation in divergent cyclophilins, involving disulfide bond formation and a loop-displacement mechanism. ..
  6. doi request reprint Molecular insights into substrate specificity and thermal stability of a bacterial GH5-CBM27 endo-1,4-β-D-mannanase
    Camila Ramos dos Santos
    Laboratório Nacional de Biociências, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP, Brazil
    J Struct Biol 177:469-76. 2012
    ....