Shisong Ma

Summary

Publications

  1. pmc Salt cress. A halophyte and cryophyte Arabidopsis relative model system and its applicability to molecular genetic analyses of growth and development of extremophiles
    Gunsu Inan
    Center for Plant Environmental Stress Physiology, Purdue University, West Lafayette, Indiana 47907 2010, USA
    Plant Physiol 135:1718-37. 2004
  2. pmc Arabidopsis RTNLB1 and RTNLB2 Reticulon-like proteins regulate intracellular trafficking and activity of the FLS2 immune receptor
    Hyoung Yool Lee
    Boyce Thompson Institute for Plant Research, Ithaca, New York 14853, USA
    Plant Cell 23:3374-91. 2011
  3. pmc SIZ1 regulation of phosphate starvation-induced root architecture remodeling involves the control of auxin accumulation
    Kenji Miura
    Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305 8572, Japan
    Plant Physiol 155:1000-12. 2011
  4. doi request reprint Gene networks in Arabidopsis thaliana for metabolic and environmental functions
    Shisong Ma
    Department of Plant Biology, University of Illinois at Urbana Champaign, 1201 W Gregory Drive, Urbana IL 61801, USA
    Mol Biosyst 4:199-204. 2008
  5. doi request reprint Coexpression characteristics of trehalose-6-phosphate phosphatase subfamily genes reveal different functions in a network context
    Pinghua Li
    Department of Plant Biology, University of Illinois at Urbana Champaign, 1201 West Gregory Drive, Urbana, IL 61801, USA
    Physiol Plant 133:544-56. 2008
  6. pmc An Arabidopsis gene network based on the graphical Gaussian model
    Shisong Ma
    Physiological and Molecular Plant Biology Program, University of Illinois at Urbana Champaign, Urbana, Illinois 61801, USA
    Genome Res 17:1614-25. 2007
  7. pmc Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression
    Shisong Ma
    Physiological and Molecular Plant Biology Graduate Program, University of Illinois at Urbana Champaign, Urbana, IL 61801, USA
    Genome Biol 8:R49. 2007
  8. ncbi request reprint Salicylic acid-mediated innate immunity in Arabidopsis is regulated by SIZ1 SUMO E3 ligase
    Jiyoung Lee
    Division of Applied Life Science BK21 program, Plant Molecular Biology and Biotechnolgy Research Center and Environmental Biotechnology National Core Research Center, Graduate School of Gyeongsang National University, Jinju, Korea
    Plant J 49:79-90. 2007
  9. ncbi request reprint Dissecting salt stress pathways
    Shisong Ma
    Department of Plant Biology, University of Illinois at Urbana Champaign, 1201 W Gregory Drive, Urbana, IL 61801, USA
    J Exp Bot 57:1097-107. 2006
  10. ncbi request reprint Unraveling abiotic stress tolerance mechanisms--getting genomics going
    Hans J Bohnert
    Department of Plant Biology, Department of Crop Sciences, and Institute for Genome Biology, University of Illinois at Urbana Champaign, Urbana, Illinois 61801, USA
    Curr Opin Plant Biol 9:180-8. 2006

Collaborators

Detail Information

Publications13

  1. pmc Salt cress. A halophyte and cryophyte Arabidopsis relative model system and its applicability to molecular genetic analyses of growth and development of extremophiles
    Gunsu Inan
    Center for Plant Environmental Stress Physiology, Purdue University, West Lafayette, Indiana 47907 2010, USA
    Plant Physiol 135:1718-37. 2004
    ..In addition, the generation of T-DNA-tagged mutant collections of salt cress, already in progress, will open the door to a new era of forward and reverse genetic studies of extremophile plant biology...
  2. pmc Arabidopsis RTNLB1 and RTNLB2 Reticulon-like proteins regulate intracellular trafficking and activity of the FLS2 immune receptor
    Hyoung Yool Lee
    Boyce Thompson Institute for Plant Research, Ithaca, New York 14853, USA
    Plant Cell 23:3374-91. 2011
    ..The results are consistent with a model whereby RTNLB1 and RTNLB2 regulate the transport of newly synthesized FLS2 to the plasma membrane...
  3. pmc SIZ1 regulation of phosphate starvation-induced root architecture remodeling involves the control of auxin accumulation
    Kenji Miura
    Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305 8572, Japan
    Plant Physiol 155:1000-12. 2011
    ..Together, these results suggest that SIZ1 negatively regulates Pi starvation-induced root architecture remodeling through the control of auxin patterning...
  4. doi request reprint Gene networks in Arabidopsis thaliana for metabolic and environmental functions
    Shisong Ma
    Department of Plant Biology, University of Illinois at Urbana Champaign, 1201 W Gregory Drive, Urbana IL 61801, USA
    Mol Biosyst 4:199-204. 2008
    ....
  5. doi request reprint Coexpression characteristics of trehalose-6-phosphate phosphatase subfamily genes reveal different functions in a network context
    Pinghua Li
    Department of Plant Biology, University of Illinois at Urbana Champaign, 1201 West Gregory Drive, Urbana, IL 61801, USA
    Physiol Plant 133:544-56. 2008
    ..The structure of the transcript coexpression networks, by associating diverse members of gene families into separate clusters, facilitates hypothesis building and in-depth studies of functions of individual genes in families...
  6. pmc An Arabidopsis gene network based on the graphical Gaussian model
    Shisong Ma
    Physiological and Molecular Plant Biology Program, University of Illinois at Urbana Champaign, Urbana, Illinois 61801, USA
    Genome Res 17:1614-25. 2007
    ..The network model is included...
  7. pmc Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression
    Shisong Ma
    Physiological and Molecular Plant Biology Graduate Program, University of Illinois at Urbana Champaign, Urbana, IL 61801, USA
    Genome Biol 8:R49. 2007
    ..Organizing these datasets could reveal the structure and mechanisms of responses and crosstalk between pathways, and in which cells the plants perceive, signal, respond to, and integrate environmental inputs...
  8. ncbi request reprint Salicylic acid-mediated innate immunity in Arabidopsis is regulated by SIZ1 SUMO E3 ligase
    Jiyoung Lee
    Division of Applied Life Science BK21 program, Plant Molecular Biology and Biotechnolgy Research Center and Environmental Biotechnology National Core Research Center, Graduate School of Gyeongsang National University, Jinju, Korea
    Plant J 49:79-90. 2007
    ..Taken together, these results demonstrate that SIZ1 is required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis...
  9. ncbi request reprint Dissecting salt stress pathways
    Shisong Ma
    Department of Plant Biology, University of Illinois at Urbana Champaign, 1201 W Gregory Drive, Urbana, IL 61801, USA
    J Exp Bot 57:1097-107. 2006
    ..A network begins to emerge, revealing the basis of cross-talk between high salinity and other stresses...
  10. ncbi request reprint Unraveling abiotic stress tolerance mechanisms--getting genomics going
    Hans J Bohnert
    Department of Plant Biology, Department of Crop Sciences, and Institute for Genome Biology, University of Illinois at Urbana Champaign, Urbana, Illinois 61801, USA
    Curr Opin Plant Biol 9:180-8. 2006
    ....
  11. ncbi request reprint Salinity stress adaptation competence in the extremophile Thellungiella halophila in comparison with its relative Arabidopsis thaliana
    Qingqiu Gong
    Department of Plant Biology, University of Illinois at Urbana Champaign, 61801, USA
    Plant J 44:826-39. 2005
    ..At 150 mm NaCl, Thellungiella maintained unimpeded growth. Transcript intensity analyses and metabolite profiles supported the microarray results, pointing towards a stress-anticipatory preparedness in Thellungiella...
  12. ncbi request reprint Loss of TIP1;1 aquaporin in Arabidopsis leads to cell and plant death
    Shisong Ma
    Department of Plant Biology, University of Illinois at Urbana Champaign, 1201 W Gregory Drive, Urbana, IL 61801, USA
    Plant J 40:845-59. 2004
    ..Phenotype and expression characteristics support a view of TIP1;1 functioning as a marker for vesicles that are targeted to the central vacuole...
  13. pmc Discovery of stress responsive DNA regulatory motifs in Arabidopsis
    Shisong Ma
    Department of Plant Biology and the Genome Center, College of Biological Sciences, University of California Davis, Davis, California, United States of America
    PLoS ONE 7:e43198. 2012
    ..thaliana and A. lyrata. This new comparative genomics method does not depend on alignments of homologous gene promoter sequences...