Phylogenetic and serological characterization of echovirus 11 and echovirus 19 strains causing uveitisA N Lukashev
Institute of Poliomyelitis and Viral Encephalitides RAMS, Moscow, Russia
Arch Virol 147:131-42. 2002
..Minor details of the epidemiology of the outbreaks were also revealed...
Genetic variation and recombination in Aichi virusAlexander N Lukashev
Institute of Virology, University of Bonn Medical Centre, Bonn, Germany
J Gen Virol 93:1226-35. 2012
..While in most picornaviruses the genomic dinucleotide content contributed significantly to CUB, in AiV its extreme nucleotide content, i.e. 57 % third codon position C, was the main driving force behind the apparent CUB...
Recombination among picornavirusesA N Lukashev
M P Chumakov Institute of Poliomyelitis and Viral Encephalitides, Russian Academy of Medical Sciences, Moscow Region, Russia
Rev Med Virol 20:327-37. 2010
..This review covers existing evidence of recombination in most genera of the family Picornaviridae and possible implications for diagnostics, epidemiology and classification...
Evidence of frequent recombination among human adenovirusesAlexander N Lukashev
Bute Medical School, University of St Andrews, Scotland, UK
J Gen Virol 89:380-8. 2008
..Comparison of the right end (nt 18838-33452) of this isolate with that of the ATCC Ad6 strain showed clear evidence of multiple recombination events...
Analysis of echovirus 30 isolates from Russia and new independent states revealing frequent recombination and reemergence of ancient lineagesAlexander N Lukashev
Institute of Poliomyelitis and Viral Encephalitides RAMS, Moscow, Russia
J Clin Microbiol 46:665-70. 2008
..In general, a comparison of the VP1 and 3D genome region phylogenies revealed, in some instances, virtually independent circulation of enterovirus genome fragments on a scale of years...
Recombination in circulating Human enterovirus B: independent evolution of structural and non-structural genome regionsAlexander N Lukashev
Institute of Poliomyelitis and Viral Encephalitides RAMS, Moscow, Russia
J Gen Virol 86:3281-90. 2005
..A range of available phylogenetic methods was also compared for efficient detection of recombination in enteroviruses...
Evidence for recombination in Crimean-Congo hemorrhagic fever virusAlexander N Lukashev
Institute of Poliomyelitis and Viral Encephalitides RAMS, Moscow 142782, Russia
J Gen Virol 86:2333-8. 2005
..These findings, coupled with a recent report on reassortment in CCHF virus, suggest caution when assessing CCHF virus phylogeny based on short sequence fragments...
Role of recombination in evolution of enterovirusesAlexander N Lukashev
Chumakov Institute of Poliomyelitis and Viral Encephalitides RAMS, Moscow, Russia
Rev Med Virol 15:157-67. 2005
..It remains to be determined what role recombination plays in the emergence of new enterovirus variants and in the macroevolution of animal enteroviruses and viruses of the picorna-like supergroup...
Recombination in uveitis-causing enterovirus strainsA N Lukashev
Institute of Poliomyelitis and Viral Encephalitides RAMS, Moscow 142782, Russia
J Gen Virol 85:463-70. 2004
..A full genome sequence comparison of the three subtypes of EU-causing strains excludes the role of recent recombination in their emergence, and points to their independent emergence...
Molecular epidemiology of enteroviruses causing uveitis and multisystem hemorrhagic disease of infantsA N Lukashev
Institute of Poliomyelitis and Viral Encephalitides RAMS, Moscow, Russia
Virology 307:45-53. 2003
..Subgrouping within this cluster correlated with year of virus isolation, not with the disease the viruses caused in infants (EU or MHD)...
Recombination in circulating enterovirusesAlexander N Lukashev
Institute of Poliomyelitis and Viral Encephalitides RAMS, Moscow, Russia
J Virol 77:10423-31. 2003
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Bats worldwide carry hepatitis E virus-related viruses that form a putative novel genus within the family HepeviridaeJan Felix Drexler
Institute of Virology, University of Bonn Medical Centre, Bonn, Germany
J Virol 86:9134-47. 2012
..Human HEV-related viruses in farmed and peridomestic animals might represent secondary acquisitions of human viruses, rather than animal precursors causally involved in the evolution of human HEV...
Novel serotypes 105 and 116 are members of distinct subgroups of Human enterovirus CAlexander N Lukashev
Chumakov Institute of Poliomyelitis and Viral Encephalitides, Moscow, Russia
J Gen Virol 93:2357-62. 2012
..As there is also evidence of different permissive replication systems and distinct genetic properties of these subgroups, they may represent subspecies of the HEV-C species or different stages of speciation...
Aichi virus shedding in high concentrations in patients with acute diarrheaJan Felix Drexler
University of Bonn Medical Centre, Bonn, Germany
Emerg Infect Dis 17:1544-8. 2011
..High concentrations of up to 1.32 × 1012 RNA copies/g stool were found in 10 (2.0%) of 499 outpatients sampled in northern Germany, 2004. These data substantiate Aichi virus pathogenicity in humans...
Enterovirus uveitisVasilii A Lashkevich
Chumakov Institute of Poliomyelitis and Viral Encephalitides RAMS, Moscow, Russia
Rev Med Virol 14:241-54. 2004
..In this review we present a summary of the vast epidemiological, virological, clinical and experimental data on this new form of ophthalmic infection...
Adenovirus isolation rates in acute flaccid paralysis patientsOlga E Ivanova
M P Chumakov Institute of Poliomyelitis and Viral Encephalitides, Moscow, Russia
J Med Virol 84:75-80. 2012
..Therefore, immune deficiencies and congested groups in children's facilities (orphanages and hospitals) could affect significantly the prevalence of adenovirus shedding. The role of adenoviruses in AFP requires further study...
Microevolution of tick-borne encephalitis virus in course of host alternationLidiya Iu Romanova
M P Chumakov Institute of Poliomyelitis and Viral Encephalitides, Russian Academy of Medical Sciences, Moscow Region 142782, Russia
Virology 362:75-84. 2007
..Host switch results in a change in the ratio of these variants in the population. Plaque purification of the tick-adapted virus resulted in the prompt emergence of new mutants with different virulence for mammals...
Recombination in hepatitis A virus: evidence for reproductive isolation of genotypesIlya S Belalov
M P Chumakov Institute of Poliomyelitis and Viral Encephalitides, Moscow, Russia
J Gen Virol 92:860-72. 2011
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Causes and implications of codon usage bias in RNA virusesIlya S Belalov
Chumakov Institute of Poliomyelitis and Viral Encephalitides, Russian Academy of Medical Sciences, Moscow, Russia
PLoS ONE 8:e56642. 2013
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Bats host major mammalian paramyxovirusesJan Felix Drexler
Institute of Virology, University of Bonn Medical Centre, Bonn 53127, Germany
Nat Commun 3:796. 2012
..Future attempts to predict the emergence of novel paramyxoviruses in humans and livestock will have to rely fundamentally on these data...
An enterovirus strain isolated from diabetic child belongs to a genetic subcluster of echovirus 11, but is also neutralised with monotypic antisera to coxsackievirus A9Haider Al-Hello
Enterovirus Laboratory, National Public Health Institute, Helsinki, Finland
J Gen Virol 89:1949-59. 2008
..Thus, double specificity of E-11/D207 seems to be a real characteristic shared by the phylogenetically closely related virus strains in the genetic subgroup B of E-11...