Natalya Kurochkina

Summary

Publications

  1. ncbi request reprint Amino acid composition of parallel helix-helix interfaces
    N Kurochkina
    Department of Biophysics, The School of Theoretical Modeling, P O Box 15676, Chevy Chase, MD 20825, USA
    J Theor Biol 247:110-21. 2007
  2. doi request reprint Specific sequence combinations at parallel and antiparallel helix-helix interfaces
    N Kurochkina
    Department of Biophysics, School of Theoretical Modeling, P O Box 15676, Chevy Chase, MD 20825, USA
    J Theor Biol 255:188-98. 2008
  3. pmc Molecular modeling of the bifunctional enzyme UDP-GlcNAc 2-epimerase/ManNAc kinase and predictions of structural effects of mutations associated with HIBM and sialuria
    Natalya Kurochkina
    Department of Biophysics, The School of Theoretical Modeling, Chevy Chase, MD 20825, USA
    Glycobiology 20:322-37. 2010
  4. doi request reprint Helix-helix interactions and their impact on protein motifs and assemblies
    Natalya Kurochkina
    Department of Biophysics, The School of Theoretical Modeling, PO Box 15676, Chevy Chase, MD 20825, USA
    J Theor Biol 264:585-92. 2010
  5. doi request reprint Helix-helix interfaces and ligand binding
    Natalya Kurochkina
    The School of Theoretical Modeling, Department of Biophysics, PO Box 15676, Chevy Chase, MD 20825, USA
    J Theor Biol 283:92-102. 2011

Detail Information

Publications5

  1. ncbi request reprint Amino acid composition of parallel helix-helix interfaces
    N Kurochkina
    Department of Biophysics, The School of Theoretical Modeling, P O Box 15676, Chevy Chase, MD 20825, USA
    J Theor Biol 247:110-21. 2007
    ..Within each group of observed combinations correlation exists between the size of amino acid and magnitude of the interhelical angle...
  2. doi request reprint Specific sequence combinations at parallel and antiparallel helix-helix interfaces
    N Kurochkina
    Department of Biophysics, School of Theoretical Modeling, P O Box 15676, Chevy Chase, MD 20825, USA
    J Theor Biol 255:188-98. 2008
    ..Correlation between specific position of methyl groups and interhelical angle is found for parallel and antiparallel types of packing...
  3. pmc Molecular modeling of the bifunctional enzyme UDP-GlcNAc 2-epimerase/ManNAc kinase and predictions of structural effects of mutations associated with HIBM and sialuria
    Natalya Kurochkina
    Department of Biophysics, The School of Theoretical Modeling, Chevy Chase, MD 20825, USA
    Glycobiology 20:322-37. 2010
    ..This work contributes to further understanding of GNE/MNK function and ligand binding, which may assist future studies for therapeutic options that target misfolded GNE/MNK in HIBM and/or sialuria...
  4. doi request reprint Helix-helix interactions and their impact on protein motifs and assemblies
    Natalya Kurochkina
    Department of Biophysics, The School of Theoretical Modeling, PO Box 15676, Chevy Chase, MD 20825, USA
    J Theor Biol 264:585-92. 2010
    ..Approximation of a cross section of each motif with a polygon (n-gon, n=4, 8, 16) shows that a good correlation exists between polygon interior angles and angles formed by the edges of helix surfaces...
  5. doi request reprint Helix-helix interfaces and ligand binding
    Natalya Kurochkina
    The School of Theoretical Modeling, Department of Biophysics, PO Box 15676, Chevy Chase, MD 20825, USA
    J Theor Biol 283:92-102. 2011
    ..Interhelical angles are found to correlate with the conformation of the glutathione S-transferase ligands glutathione, s-hexylglutathione, glutathione sulfonic acid, and glutathione-s-dinitrobenzene...