Ivan Junier

Summary

Publications

  1. ncbi CTCF-mediated transcriptional regulation through cell type-specific chromosome organization in the β-globin locus
    Ivan Junier
    Epigenomics Project and institute of Systems and Synthetic Biology, Genopole, CNRS, University of Evry, 5 rue Henri Desbrueres, Evry F 91030, Institute of Complex Systems, Paris, France
    Nucleic Acids Res 40:7718-27. 2012
  2. ncbi Genomic organization of evolutionarily correlated genes in bacteria: limits and strategies
    Ivan Junier
    Epigenomics Project Institute of Systems and Synthetic Biology, Genopole, CNRS, University of Evry, 91030 Evry, France
    J Mol Biol 419:369-86. 2012
  3. ncbi PreCisIon: PREdiction of CIS-regulatory elements improved by gene's positION
    Mohamed Elati
    Institute of Systems and Synthetic Biology, CNRS, University of Evry, Genopole, 91030 Evry, France
    Nucleic Acids Res 41:1406-15. 2013
  4. ncbi Periodic pattern detection in sparse boolean sequences
    Ivan Junier
    Epigenomics Project, Genopole, CNRS UPS3201, UniverSud Paris, University of Evry, Genopole Campus 1 Genavenir 6, 5 rue Henri Desbruères F 91030 EVRY cedex, France
    Algorithms Mol Biol 5:31. 2010
  5. ncbi The layout of a bacterial genome
    Francois Kepes
    Epigenomics Project, Institute of Systems and Synthetic Biology, CNRS, University of Evry, France
    FEBS Lett 586:2043-8. 2012

Collaborators

Detail Information

Publications5

  1. ncbi CTCF-mediated transcriptional regulation through cell type-specific chromosome organization in the β-globin locus
    Ivan Junier
    Epigenomics Project and institute of Systems and Synthetic Biology, Genopole, CNRS, University of Evry, 5 rue Henri Desbrueres, Evry F 91030, Institute of Complex Systems, Paris, France
    Nucleic Acids Res 40:7718-27. 2012
    ..Our findings show that an ensemble of CTCF contacts functionally affects spatial distances between control elements and target genes contributing to chromosomal organization required for transcription...
  2. ncbi Genomic organization of evolutionarily correlated genes in bacteria: limits and strategies
    Ivan Junier
    Epigenomics Project Institute of Systems and Synthetic Biology, Genopole, CNRS, University of Evry, 91030 Evry, France
    J Mol Biol 419:369-86. 2012
    ..The transition at 20 genes is reminiscent of the size of the longest operons and of topological microdomains. The range for which DNA neighborhood optimizes biochemical interactions might therefore be defined by DNA topology...
  3. ncbi PreCisIon: PREdiction of CIS-regulatory elements improved by gene's positION
    Mohamed Elati
    Institute of Systems and Synthetic Biology, CNRS, University of Evry, Genopole, 91030 Evry, France
    Nucleic Acids Res 41:1406-15. 2013
    ..The newly predicted gene targets are demonstrated to be functionally consistent with previously known targets, as assessed by analysis of Gene Ontology enrichment or of the relevant literature and databases...
  4. ncbi Periodic pattern detection in sparse boolean sequences
    Ivan Junier
    Epigenomics Project, Genopole, CNRS UPS3201, UniverSud Paris, University of Evry, Genopole Campus 1 Genavenir 6, 5 rue Henri Desbruères F 91030 EVRY cedex, France
    Algorithms Mol Biol 5:31. 2010
    ..e. sequences of the type 010011011010... where the ratio of the number of 1's (denoting here the transcription start of a gene) to 0's is small...
  5. ncbi The layout of a bacterial genome
    Francois Kepes
    Epigenomics Project, Institute of Systems and Synthetic Biology, CNRS, University of Evry, France
    FEBS Lett 586:2043-8. 2012
    ..On the basis of this analysis, lessons are drawn for full genome design...