Kiyoko F Aoki-Kinoshita

Summary

Affiliation: Soka University
Country: Japan

Publications

  1. ncbi request reprint Bioinformatics approaches in glycomics and drug discovery
    Kiyoko F Aoki-Kinoshita
    Soka University, Faculty of Engineering, Department of Bioinformatics, 1 236 Tangi cho, Hachioji shi, Tokyo 192 8577, Japan
    Curr Opin Mol Ther 8:514-20. 2006
  2. pmc The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*
    Toshiaki Katayama
    Database Center for Life Science, Research Organization of Information and Systems, 2 11 16 Yayoi, Bunkyo ku, Tokyo, 113 0032, Japan
    J Biomed Semantics 1:8. 2010
  3. doi request reprint Glycomic analysis using KEGG GLYCAN
    Kiyoko F Aoki-Kinoshita
    Department of Bioinformatics, Faculty of Engineering, Soka University, 1 236 Tangi machi, Hachioji, Tokyo, 192 8577, Japan
    Methods Mol Biol 1273:97-107. 2015
  4. pmc GlycoRDF: an ontology to standardize glycomics data in RDF
    René Ranzinger
    Complex Carbohydrate Research Center, University of Georgia, Athens, GA, USA, Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan, Faculty of Engineering, Soka University, Tokyo, Japan, Biomolecular Frontiers Research Centre, Macquarie University, Sydney, Australia, Database Center for Life Science, Research Organization of Information and Systems, Chiba, Japan, Institute of Veterinary Physiology and Biochemistry, Justus Liebig University Giessen, Giessen, Germany, Graduate School of Medical and Dental Sciences, Niigata University, Niigata, Japan, N D Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia and Laboratory of Glyco organic Chemistry, The Noguchi Institute, Tokyo, Japan
    Bioinformatics 31:919-25. 2015
  5. pmc UniCarbKB: building a knowledge platform for glycoproteomics
    Matthew P Campbell
    Biomolecular Frontiers Research Centre, Macquarie University, North Ryde, NSW 2109, Australia, Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland, Swiss Prot group, Swiss Institute of Bioinformatics, Geneva, Switzerland, Department of Bioinformatics, Faculty of Engineering, Soka University, 1 236 Tangi machi, Hachioji, Tokyo, Japan and Section of Biology, Faculty of Sciences, University of Geneva, Switzerland
    Nucleic Acids Res 42:D215-21. 2014

Collaborators

  • Hisashi Narimatsu
  • Shujiro Okuda
  • Thomas Lütteke
  • Elisabeth Gasteiger
  • Frederique Lisacek
  • René Ranzinger
  • Matthew P Campbell
  • Toshiaki Katayama
  • Yukie Akune
  • Nicolle H Packer
  • Robyn Peterson
  • Julien Mariethoz
  • Akira Funahashi
  • Mark D Wilkinson
  • Hideaki Sugawara
  • Lord Hendrix Barboza
  • Tamotsu Noguchi
  • Kiyoshi Asai
  • Akira R Kinjo
  • Yasumasa Shigemoto
  • Hiroyuki Nakamura
  • Richard Holland
  • Daron M Standley
  • Toshihisa Takagi
  • Tatsuya Nishizawa
  • Matthew Pocock
  • Keiichiro Ono
  • Yasunori Yamamoto
  • Heikki Lehvaslaiho
  • Mitsuteru Nakao
  • Shuichi Kawashima
  • Christian M Zmasek
  • Pjotr Prins
  • Raoul Jp Bonnal
  • Richard Bruskiewich
  • Lukasz Salwinski
  • Atsuko Yamaguchi
  • Thomas M Oinn
  • Alex Gutteridge
  • Eri Kibukawa
  • Hilmar Lapp
  • Jan Aerts
  • Andreas Groscurth
  • Naohisa Goto
  • Chikashi Nobata
  • Martin Senger
  • Mark Schreiber
  • Rutger A Vos
  • Yasukazu Nakamura
  • Bruno Aranda
  • Michael Kuhn
  • Jose M Fernandez
  • Kazuharu Arakawa
  • WILLIAM YORK
  • Jan C Bryne
  • Hong Woo Chun
  • Yoshinobu Kano
  • Paul Mk Gordon
  • Evangelos Pafilis
  • Florian Reisinger
  • Stuart Owen
  • Edward A Kawas
  • Oswaldo Trelles
  • Toshiyuki Tashiro
  • Arnaud Kerhornou
  • Shinobu Okamoto

Detail Information

Publications5

  1. ncbi request reprint Bioinformatics approaches in glycomics and drug discovery
    Kiyoko F Aoki-Kinoshita
    Soka University, Faculty of Engineering, Department of Bioinformatics, 1 236 Tangi cho, Hachioji shi, Tokyo 192 8577, Japan
    Curr Opin Mol Ther 8:514-20. 2006
    ....
  2. pmc The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*
    Toshiaki Katayama
    Database Center for Life Science, Research Organization of Information and Systems, 2 11 16 Yayoi, Bunkyo ku, Tokyo, 113 0032, Japan
    J Biomed Semantics 1:8. 2010
    ....
  3. doi request reprint Glycomic analysis using KEGG GLYCAN
    Kiyoko F Aoki-Kinoshita
    Department of Bioinformatics, Faculty of Engineering, Soka University, 1 236 Tangi machi, Hachioji, Tokyo, 192 8577, Japan
    Methods Mol Biol 1273:97-107. 2015
    ..A number of analytical tools are also available, including the composite structure map (CSM), KegDraw, KCam, and GECS. These databases and tools will be described along with simple examples of their usage. ..
  4. pmc GlycoRDF: an ontology to standardize glycomics data in RDF
    René Ranzinger
    Complex Carbohydrate Research Center, University of Georgia, Athens, GA, USA, Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan, Faculty of Engineering, Soka University, Tokyo, Japan, Biomolecular Frontiers Research Centre, Macquarie University, Sydney, Australia, Database Center for Life Science, Research Organization of Information and Systems, Chiba, Japan, Institute of Veterinary Physiology and Biochemistry, Justus Liebig University Giessen, Giessen, Germany, Graduate School of Medical and Dental Sciences, Niigata University, Niigata, Japan, N D Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia and Laboratory of Glyco organic Chemistry, The Noguchi Institute, Tokyo, Japan
    Bioinformatics 31:919-25. 2015
    ..Unfortunately, there is no common standard in the representation of the stored information or a common machine-readable interface allowing bioinformatics groups to easily extract and cross-reference the stored information...
  5. pmc UniCarbKB: building a knowledge platform for glycoproteomics
    Matthew P Campbell
    Biomolecular Frontiers Research Centre, Macquarie University, North Ryde, NSW 2109, Australia, Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland, Swiss Prot group, Swiss Institute of Bioinformatics, Geneva, Switzerland, Department of Bioinformatics, Faculty of Engineering, Soka University, 1 236 Tangi machi, Hachioji, Tokyo, Japan and Section of Biology, Faculty of Sciences, University of Geneva, Switzerland
    Nucleic Acids Res 42:D215-21. 2014
    ..Here, we introduce a refactored database, supported by substantial new curated data collections and intuitive user-interfaces that improve database searching. ..