Hideki Nagasaki

Summary

Affiliation: National Institute of Advanced Industrial Science and Technology
Country: Japan

Publications

  1. ncbi request reprint Species-specific variation of alternative splicing and transcriptional initiation in six eukaryotes
    Hideki Nagasaki
    Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology, Tokyo 135 0064, Japan
    Gene 364:53-62. 2005
  2. ncbi request reprint Automated classification of alternative splicing and transcriptional initiation and construction of visual database of classified patterns
    Hideki Nagasaki
    Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology Tokyo 135 0064, Japan
    Bioinformatics 22:1211-6. 2006
  3. ncbi request reprint Genome sequencing and analysis of Aspergillus oryzae
    Masayuki Machida
    Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology AIST, Higashi 1 1 1, Tsukuba, Ibaraki 305 8566, Japan
    Nature 438:1157-61. 2005
  4. pmc Integrative annotation of 21,037 human genes validated by full-length cDNA clones
    Tadashi Imanishi
    Integrated Database Group, Biological Information Research Center, National Institute of Advanced Industrial Science and Technology, Tokyo, Japan
    PLoS Biol 2:e162. 2004
  5. pmc RiceGAAS: an automated annotation system and database for rice genome sequence
    Katsumi Sakata
    National Institute of Agrobiological Sciences, 2 1 2 Kannondai, Tsukuba, Ibaraki 305 8602, Japan
    Nucleic Acids Res 30:98-102. 2002
  6. ncbi request reprint The genome sequence and structure of rice chromosome 1
    Takuji Sasaki
    Rice Genome Research Program, National Institute of Agrobiological Sciences, 1 2, Kannondai 2 chome, Tsukuba, Ibaraki 305 8602, Japan
    Nature 420:312-6. 2002
  7. pmc The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts
    Chisato Yamasaki
    Japan Biological Information Research Center, Japan Biological Informatics Consortium, Japan
    Nucleic Acids Res 36:D793-9. 2008

Detail Information

Publications7

  1. ncbi request reprint Species-specific variation of alternative splicing and transcriptional initiation in six eukaryotes
    Hideki Nagasaki
    Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology, Tokyo 135 0064, Japan
    Gene 364:53-62. 2005
    ....
  2. ncbi request reprint Automated classification of alternative splicing and transcriptional initiation and construction of visual database of classified patterns
    Hideki Nagasaki
    Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology Tokyo 135 0064, Japan
    Bioinformatics 22:1211-6. 2006
    ..Large-scale detection and classification of alternative splicing and transcriptional initiation (ASTI) is the first step towards detailed studies of the functional implication and mechanisms of these phenomena...
  3. ncbi request reprint Genome sequencing and analysis of Aspergillus oryzae
    Masayuki Machida
    Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology AIST, Higashi 1 1 1, Tsukuba, Ibaraki 305 8566, Japan
    Nature 438:1157-61. 2005
    ..Specific expansion of genes for secretory hydrolytic enzymes, amino acid metabolism and amino acid/sugar uptake transporters supports the idea that A. oryzae is an ideal microorganism for fermentation...
  4. pmc Integrative annotation of 21,037 human genes validated by full-length cDNA clones
    Tadashi Imanishi
    Integrated Database Group, Biological Information Research Center, National Institute of Advanced Industrial Science and Technology, Tokyo, Japan
    PLoS Biol 2:e162. 2004
    ..The H-InvDB platform represents a substantial contribution to resources needed for the exploration of human biology and pathology...
  5. pmc RiceGAAS: an automated annotation system and database for rice genome sequence
    Katsumi Sakata
    National Institute of Agrobiological Sciences, 2 1 2 Kannondai, Tsukuba, Ibaraki 305 8602, Japan
    Nucleic Acids Res 30:98-102. 2002
    ..RiceGAAS also has a data submission mechanism that allows public users to perform fully automated annotation of their own sequences. The system can be accessed at http://RiceGAAS.dna.affrc.go.jp/...
  6. ncbi request reprint The genome sequence and structure of rice chromosome 1
    Takuji Sasaki
    Rice Genome Research Program, National Institute of Agrobiological Sciences, 1 2, Kannondai 2 chome, Tsukuba, Ibaraki 305 8602, Japan
    Nature 420:312-6. 2002
    ..Comparison with a draft sequence indicates the importance of a high-quality finished sequence...
  7. pmc The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts
    Chisato Yamasaki
    Japan Biological Information Research Center, Japan Biological Informatics Consortium, Japan
    Nucleic Acids Res 36:D793-9. 2008
    ....