- Parallelization of the MAFFT multiple sequence alignment programKazutaka Katoh
Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology, Tokyo, Japan
Bioinformatics 26:1899-900. 2010..AVAILABILITY: The parallelized version of MAFFT is available at http://mafft.cbrc.jp/alignment/software/. This version currently supports the Linux operating system only...
- MAFFT multiple sequence alignment software version 7: improvements in performance and usabilityKazutaka Katoh
Immunology Frontier Research Center, Osaka University, Suita, Osaka, Japan
Mol Biol Evol 30:772-80. 2013..Some examples incorrectly aligned by MAFFT are also shown to clarify its limitations. We discuss how to avoid misalignments, and our ongoing efforts to overcome such limitations...
- Adding unaligned sequences into an existing alignment using MAFFT and LASTKazutaka Katoh
Laboratory of Systems Immunology, Immunology Frontier Research Center, Osaka University, Yamadaoka, Suita 565 0871, Japan
Bioinformatics 28:3144-6. 2012....
- Molecular evolution of arthropod color vision deduced from multiple opsin genes of jumping spidersMitsumasa Koyanagi
Department of Earth and Space Science, Graduate School of Science, Osaka University, Toyonaka 560 0043, Japan
J Mol Evol 66:130-7. 2008..Thereafter, in each pancrustacean and chelicerate lineage, the opsin repertoire was reconstructed by gene losses, gene duplications, and function-altering amino acid substitutions, leading to evolution of color vision...