Affiliation: Kyushu University
- Identification and characterization of the RNA binding surface of the pentatricopeptide repeat proteinKeiko Kobayashi
Faculty of Agriculture, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka 812 8581, Japan
Nucleic Acids Res 40:2712-23. 2012....
- Elucidation of the RNA recognition code for pentatricopeptide repeat proteins involved in organelle RNA editing in plantsYusuke Yagi
Faculty of Agriculture, Kyushu University, Fukuoka, Japan
PLoS ONE 8:e57286. 2013..Data from the decoded nucleotide frequencies for these 3 amino acids were used to assign accurate interacting sites to several PPR proteins for RNA editing and to predict the target site for an uncharacterized PPR protein...
- Pentatricopeptide repeat proteins involved in plant organellar RNA editingYusuke Yagi
Faculty of Agriculture Kyushu University Fukuoka, Japan
RNA Biol 10:1419-25. 2013..Further, computational target assignment using the PPR RNA recognition codes suggests a distinct, unknown mode-of-action, by which PPR proteins serve a function beyond site recognition in RNA editing. ..
- Mechanistic insight into pentatricopeptide repeat proteins as sequence-specific RNA-binding proteins for organellar RNAs in plantsTakahiro Nakamura
Department of Research Superstar Program, Institute of Advanced Study, Kyushu University, Fukuoka 812 8581, Japan
Plant Cell Physiol 53:1171-9. 2012..Here, we summarize recent studies addressing the mechanistic aspect of PPR proteins...
- A pentatricopeptide repeat protein is a site recognition factor in chloroplast RNA editingKenji Okuda
Graduate School of Agriculture, Kyushu University, 6 10 1 Hakozaki, Higashiku, Fukuoka 812 8581, Japan
J Biol Chem 281:37661-7. 2006..Taken together with the genetic evidence, we conclude that the pentatricopeptide repeat protein CRR4 is a sequence-specific RNA-binding protein that acts as a site recognition factor in plastid RNA editing...
- A plastid protein NUS1 is essential for build-up of the genetic system for early chloroplast development under cold stress conditionsKensuke Kusumi
Department of Biology, Kyushu University, Fukuoka 812 8581, Japan
Plant J 68:1039-50. 2011..Our results suggest that NUS1 is involved in the regulation of chloroplast RNA metabolism and promotes the establishment of the plastid genetic system during early chloroplast development under cold stress conditions...
- The potential for manipulating RNA with pentatricopeptide repeat proteinsYusuke Yagi
Faculty of Agriculture, Kyushu University, Fukuoka, 812 8581, Japan
Plant J 78:772-82. 2014....