Takahiro Nakamura

Summary

Affiliation: Kyushu University
Country: Japan

Publications

  1. pmc Identification and characterization of the RNA binding surface of the pentatricopeptide repeat protein
    Keiko Kobayashi
    Faculty of Agriculture, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka 812 8581, Japan
    Nucleic Acids Res 40:2712-23. 2012
  2. pmc Elucidation of the RNA recognition code for pentatricopeptide repeat proteins involved in organelle RNA editing in plants
    Yusuke Yagi
    Faculty of Agriculture, Kyushu University, Fukuoka, Japan
    PLoS ONE 8:e57286. 2013
  3. pmc Pentatricopeptide repeat proteins involved in plant organellar RNA editing
    Yusuke Yagi
    Faculty of Agriculture Kyushu University Fukuoka, Japan
    RNA Biol 10:1419-25. 2013
  4. doi request reprint Mechanistic insight into pentatricopeptide repeat proteins as sequence-specific RNA-binding proteins for organellar RNAs in plants
    Takahiro Nakamura
    Department of Research Superstar Program, Institute of Advanced Study, Kyushu University, Fukuoka 812 8581, Japan
    Plant Cell Physiol 53:1171-9. 2012
  5. ncbi request reprint A pentatricopeptide repeat protein is a site recognition factor in chloroplast RNA editing
    Kenji Okuda
    Graduate School of Agriculture, Kyushu University, 6 10 1 Hakozaki, Higashiku, Fukuoka 812 8581, Japan
    J Biol Chem 281:37661-7. 2006
  6. doi request reprint A plastid protein NUS1 is essential for build-up of the genetic system for early chloroplast development under cold stress conditions
    Kensuke Kusumi
    Department of Biology, Kyushu University, Fukuoka 812 8581, Japan
    Plant J 68:1039-50. 2011
  7. ncbi request reprint The potential for manipulating RNA with pentatricopeptide repeat proteins
    Yusuke Yagi
    Faculty of Agriculture, Kyushu University, Fukuoka, 812 8581, Japan
    Plant J 78:772-82. 2014

Collaborators

Detail Information

Publications8

  1. pmc Identification and characterization of the RNA binding surface of the pentatricopeptide repeat protein
    Keiko Kobayashi
    Faculty of Agriculture, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka 812 8581, Japan
    Nucleic Acids Res 40:2712-23. 2012
    ....
  2. pmc Elucidation of the RNA recognition code for pentatricopeptide repeat proteins involved in organelle RNA editing in plants
    Yusuke Yagi
    Faculty of Agriculture, Kyushu University, Fukuoka, Japan
    PLoS ONE 8:e57286. 2013
    ..Data from the decoded nucleotide frequencies for these 3 amino acids were used to assign accurate interacting sites to several PPR proteins for RNA editing and to predict the target site for an uncharacterized PPR protein...
  3. pmc Pentatricopeptide repeat proteins involved in plant organellar RNA editing
    Yusuke Yagi
    Faculty of Agriculture Kyushu University Fukuoka, Japan
    RNA Biol 10:1419-25. 2013
    ..Further, computational target assignment using the PPR RNA recognition codes suggests a distinct, unknown mode-of-action, by which PPR proteins serve a function beyond site recognition in RNA editing. ..
  4. doi request reprint Mechanistic insight into pentatricopeptide repeat proteins as sequence-specific RNA-binding proteins for organellar RNAs in plants
    Takahiro Nakamura
    Department of Research Superstar Program, Institute of Advanced Study, Kyushu University, Fukuoka 812 8581, Japan
    Plant Cell Physiol 53:1171-9. 2012
    ..Here, we summarize recent studies addressing the mechanistic aspect of PPR proteins...
  5. ncbi request reprint A pentatricopeptide repeat protein is a site recognition factor in chloroplast RNA editing
    Kenji Okuda
    Graduate School of Agriculture, Kyushu University, 6 10 1 Hakozaki, Higashiku, Fukuoka 812 8581, Japan
    J Biol Chem 281:37661-7. 2006
    ..Taken together with the genetic evidence, we conclude that the pentatricopeptide repeat protein CRR4 is a sequence-specific RNA-binding protein that acts as a site recognition factor in plastid RNA editing...
  6. doi request reprint A plastid protein NUS1 is essential for build-up of the genetic system for early chloroplast development under cold stress conditions
    Kensuke Kusumi
    Department of Biology, Kyushu University, Fukuoka 812 8581, Japan
    Plant J 68:1039-50. 2011
    ..Our results suggest that NUS1 is involved in the regulation of chloroplast RNA metabolism and promotes the establishment of the plastid genetic system during early chloroplast development under cold stress conditions...
  7. ncbi request reprint The potential for manipulating RNA with pentatricopeptide repeat proteins
    Yusuke Yagi
    Faculty of Agriculture, Kyushu University, Fukuoka, 812 8581, Japan
    Plant J 78:772-82. 2014
    ....