Research Topics
Species | K MatsuzakiSummaryAffiliation: Kyoto University Country: Japan Publications
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Detail Information
Publications
Interaction between amyloid beta-protein aggregates and membranesAtsuko Kakio
Department of Energy and Hydrocarbon Chemistry, Graduate School of Engineering, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
J Pept Sci 10:612-21. 2004..Fluorescence experiments revealed that Abeta aggregated in buffer did not show any affinity for membranes...
"Click peptide" based on the "o-acyl isopeptide method": control of A beta1-42 production from a photo-triggered A beta1-42 analogueAtsuhiko Taniguchi
Department of Medicinal Chemistry, Center for Frontier Research in Medicinal Science, Kyoto Pharmaceutical University, Yamashina-ku, Kyoto 607-8412, Japan
J Am Chem Soc 128:696-7. 2006..This method provides a novel system useful for investigating the dynamic biological functions of Abeta1-42 in AD by inducible activation of Abeta1-42 self-assembly...
Magainins as paradigm for the mode of action of pore forming polypeptidesK Matsuzaki
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
Biochim Biophys Acta 1376:391-400. 1998..A novel mode of action is discussed in detail, i.e., the formation of a dynamic peptide-lipid supramolecular pore, which allows the mutually coupled transbilayer transport of ions, lipids, and peptides per se...
Optical characterization of liposomes by right angle light scattering and turbidity measurementK Matsuzaki
Graduate School of Biostudies and Graduate School of Pharmaceutical Sciences, Kyoto, Japan
Biochim Biophys Acta 1467:219-26. 2000....
Why and how are peptide-lipid interactions utilized for self defence?K Matsuzaki
Kyoto University, Graduate School of Biostudies, Sakyo ku, Kyoto 606 8501, Japan
Biochem Soc Trans 29:598-601. 2001..The peptide molecule is internalized upon the disintegration of the pore. Several anti-microbial peptides are known to work synergistically...
[Ganglioside cluster-mediated aggregation and cytotoxicity of amyloid beta-peptide: molecular mechanism and inhibition]Katsumi Matsuzaki
Kyoto University, Kyoto, Japan
Yakugaku Zasshi 130:511-5. 2010..Furthermore, nordihydroguaiaretic acid was found to effectively inhibit the ganglioside-induced amyloidogenesis by preventing the binding of Abeta to the membrane...
[Interactions between amyloid beta--protein and gangliosides]Katsumi Matsuzaki
Tanpakushitsu Kakusan Koso 47:351-6. 2002
Design, synthesis, and biophysical properties of a helical Abeta1-42 analog: Inhibition of fibrillogenesis and cytotoxicityKatsumi Matsuzaki
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
Biochem Biophys Res Commun 371:777-80. 2008..Thus, our helical Abeta1-42 is not only a model peptide to investigate the role of helical intermediates in fibrillization by Abeta, but also an inhibitor of Abeta-induced cytotoxicity...
Control of cell selectivity of antimicrobial peptidesKatsumi Matsuzaki
Graduate School of Pharmaceutical Sciences, Kyoto University, 46 29 Yoshida Shimoadachi cho, Sakyo ku, Kyoto 606 8501, Japan
Biochim Biophys Acta 1788:1687-92. 2009..Pros and cons of these approaches are discussed...
Physicochemical interactions of amyloid beta-peptide with lipid bilayersKatsumi Matsuzaki
Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606 8501, Japan
Biochim Biophys Acta 1768:1935-42. 2007..The importance of ganglioside clusters in the aggregation of Abeta is emphasized. Finally, a hypothetical physicochemical cascade in the pathogenesis of the disease is proposed...
[Pivotal role of ganglioside in aggregation of amyloid beta-protein]Katsumi Matsuzaki
Tanpakushitsu Kakusan Koso 49:2463-7. 2004
Why and how are peptide-lipid interactions utilized for self-defense? Magainins and tachyplesins as archetypesK Matsuzaki
Graduate School of Biostudies, Kyoto University, Yoshida Shimoadachi Cho 46 29, Sakyo ku, Kyoto, Japan
Biochim Biophys Acta 1462:1-10. 1999....
Interactions of an antimicrobial peptide, magainin 2, with lipopolysaccharide-containing liposomes as a model for outer membranes of gram-negative bacteriaK Matsuzaki
Graduate School of Pharmaceutical Sciences, Kyoto University, Japan
FEBS Lett 449:221-4. 1999..This system seems to be useful for investigating the molecular details of peptide-lipopolysaccharide interactions...
Modulation of magainin 2-lipid bilayer interactions by peptide chargeK Matsuzaki
Faculty of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Japan
Biochemistry 36:2104-11. 1997..The charge distribution of wild-type magainin 2 was found to be so designed as to exhibit the maximal lytic activity by simultaneously achieving a strong binding and a moderate pore stability...
Interactions of an antimicrobial peptide, magainin 2, with outer and inner membranes of Gram-negative bacteriaK Matsuzaki
Faculty of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Japan
Biochim Biophys Acta 1327:119-30. 1997..Substitution of Trp for Phe simultaneously increased the bactericidal activity and the hemolytic activity. A strategy to develop potent antimicrobial peptides was discussed on the basis of these results...
Pore formation and translocation of melittinK Matsuzaki
Faculty of Pharmaceutical Sciences, Kyoto University, Japan
Biophys J 73:831-8. 1997..A novel model for the melittin pore formation was discussed in comparison with other pore-forming peptides...
Relationship of membrane curvature to the formation of pores by magainin 2K Matsuzaki
Graduate School of Pharmaceutical Sciences, Kyoto University, Japan
Biochemistry 37:11856-63. 1998..These results suggest that the peptide imposes positive curvature strain, facilitating the formation of a torus-type pore, and that the presence of negative curvature-inducing lipids inhibits pore formation...
Mechanism of synergism between antimicrobial peptides magainin 2 and PGLaK Matsuzaki
Graduate School of Pharmaceutical Sciences, Kyoto University, Japan
Biochemistry 37:15144-53. 1998..Therefore, the synergism is a consequence of the formation of a potent heterosupramolecular complex, which is characterized by fast pore formation and moderate pore stability...
Inhibitors of amyloid beta-protein aggregation mediated by GM1-containing raft-like membranesKatsumi Matsuzaki
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
Biochim Biophys Acta 1768:122-30. 2007..Furthermore, a comparison of the inhibitory effects of various compounds between aqueous-phase and GM1-mediated aggregation of Abeta suggested that the two aggregation processes are not identical...
Interactions of amyloid beta-peptide (1-40) with ganglioside-containing membranesK Matsuzaki
Graduate School of Pharmaceutical Science, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
Biochemistry 38:4137-42. 1999..These results suggest that Abeta (1-40) imposes negative curvature strain on ganglioside-containing lipid bilayers, disturbing the structure and function of the membranes...
An antimicrobial peptide, magainin 2, induced rapid flip-flop of phospholipids coupled with pore formation and peptide translocationK Matsuzaki
Faculty of Pharmaceutical Sciences, Kyoto University, Japan
Biochemistry 35:11361-8. 1996..A simple theoretical calculation could explain the coupling of the flip-flop with the permeabilization...
Bacteria-selective synergism between the antimicrobial peptides alpha-helical magainin 2 and cyclic beta-sheet tachyplesin I: toward cocktail therapyS Kobayashi
Graduate Schools of Pharmaceutical Sciences and Biostudies, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
Biochemistry 40:14330-5. 2001..These novel observations suggested the possibility of the development of cocktail therapeutic regimens using combinations of antimicrobial peptides...
Transbilayer transport of ions and lipids coupled with mastoparan X translocationK Matsuzaki
Faculty of Pharmaceutical Sciences, Kyoto University, Japan
Biochemistry 35:8450-6. 1996..A novel model of the mastoparan-lipid interactions was proposed to explain these observations...
Cholesterol-dependent formation of GM1 ganglioside-bound amyloid beta-protein, an endogenous seed for Alzheimer amyloidA Kakio
Department of Energy and Hydrocarbon Chemistry, Graduate School of Engineering, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
J Biol Chem 276:24985-90. 2001..The results of the present study strongly suggested that increases in intramembrane cholesterol content, which are likely to occur during aging, appear to be a risk factor for amyloid fibril formation...
Formation of toxic Abeta(1-40) fibrils on GM1 ganglioside-containing membranes mimicking lipid rafts: polymorphisms in Abeta(1-40) fibrilsTakuma Okada
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
J Mol Biol 382:1066-74. 2008..This study suggests that toxic Abeta(1-40) species formed on membranes are not soluble oligomers but amyloid fibrils and that Abeta(1-40) fibrils exhibit polymorphisms...
Formation of amyloids by Abeta-(1-42) on NGF-differentiated PC12 cells: roles of gangliosides and cholesterolMasaki Wakabayashi
Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto, 606 8501, Japan
J Mol Biol 371:924-33. 2007..Our system using NGF-differentiated PC12 cells and Congo red is useful for screening inhibitors of the formation of amyloids by and cytotoxicity of Abeta...
Interactions of amyloid beta-protein with various gangliosides in raft-like membranes: importance of GM1 ganglioside-bound form as an endogenous seed for Alzheimer amyloidAtsuko Kakio
Department of Energy and Hydrocarbon Chemistry, Graduate School of Engineering, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
Biochemistry 41:7385-90. 2002..GM1-Abeta exhibited the strongest seeding potential, especially under beta-sheet-forming conditions. This study suggested that lipid composition including gangliosides and cholesterol strictly controls amyloid formation...
Formation of toxic fibrils of Alzheimer's amyloid beta-protein-(1-40) by monosialoganglioside GM1, a neuronal membrane componentTakuma Okada
Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606 8501, Japan
J Mol Biol 371:481-9. 2007..Our study suggests an exacerbation mechanism of AD and an importance of polymorphisms in Abeta fibrils during the pathogenesis of the disease...
Formation of a membrane-active form of amyloid beta-protein in raft-like model membranesAtsuko Kakio
Department of Energy and Hydrocarbon Chemistry, Graduate School of Engineering, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
Biochem Biophys Res Commun 303:514-8. 2003..These results suggest that the lipid raft containing a ganglioside cluster serves as a conformational catalyst or a chaperon generating a membrane-active form of A beta with seeding ability...
Quality of life improvements in dialysis patients receiving darbepoetin alfaShunichi Fukuhara
Department of Epidemiology and Healthcare Research, Kyoto University Graduate School of Medicine and Public Health, Kyoto, Japan
Ther Apher Dial 12:72-7. 2008..Vitality increased significantly only in those patients with the greatest increases in Hb concentration and in those with higher final Hb concentrations...
Inhibition of the formation of amyloid beta-protein fibrils using biocompatible nanogels as artificial chaperonesKeisuke Ikeda
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, 606-8501, Japan
FEBS Lett 580:6587-95. 2006..In addition, CHPNH(2) nanogels protected PC12 cells from Abeta toxicity...
Ganglioside-induced amyloid formation by human islet amyloid polypeptide in lipid raftsMasaki Wakabayashi
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Kyoto, Japan
FEBS Lett 583:2854-8. 2009..The depletion of gangliosides or cholesterol significantly reduced the amount of amyloid deposited. These results clearly showed that the formation of amyloid fibrils was mediated by gangliosides in lipid rafts...
GM1 ganglioside-mediated accumulation of amyloid beta-protein on cell membranesMasaki Wakabayashi
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
Biochem Biophys Res Commun 328:1019-23. 2005..Cholesterol depletion significantly reduced Abeta accumulation. These observations corroborate the GM1-mediated Abeta accumulation model...
"Click peptide": pH-triggered in situ production and aggregation of monomer Abeta1-42Atsuhiko Taniguchi
Department of Medicinal Chemistry, Center for Frontier Research in Medicinal Science, 21st Century COE Program, Kyoto Pharmaceutical University, Yamashina ku, Kyoto, Japan
Chembiochem 10:710-5. 2009..This click peptide strategy should provide a reliable experimental system to investigate the pathological role of Abeta1-42 in Alzheimer's disease...
A disulfide-linked amyloid-beta peptide dimer forms a protofibril-like oligomer through a distinct pathway from amyloid fibril formationTakahiro Yamaguchi
Graduate School of Pharmaceutical Sciences, Kyoto University, 46 29 Yoshida Shimoadachi, Sakyo ku, Kyoto 606 8501, Japan
Biochemistry 49:7100-7. 2010..The results emphasize the importance of the conformational flexibility of the Abeta molecule and a balance in the association and dissociation rate for the formation of rigid amyloid fibrils...
Membrane translocation mechanism of the antimicrobial peptide buforin 2Satoe Kobayashi
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
Biochemistry 43:15610-6. 2004..The presence of Pro(11) distorts the helix, concentrating basic amino acid residues in a limited amphipathic region, thus destabilizing the pore by enhanced electrostatic repulsion, enabling efficient translocation...
Action mechanism of tachyplesin I and effects of PEGylationYuichi Imura
Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606 8501, Japan
Biochim Biophys Acta 1768:1160-9. 2007..Furthermore, a reduction in DNA binding by PEGylation may also contribute to the weak activity of the PEGylated peptide...
Position-dependent hydrophobicity of the antimicrobial magainin peptide affects the mode of peptide-lipid interactions and selective toxicityTomoya Tachi
Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
Biochemistry 41:10723-31. 2002..These observations demonstrate that the hydrophobicity of the peptide also controls the mode of action and is dependent on the position of the hydrophobic amino acids in the peptide sequence...
Controlled production of amyloid beta peptide from a photo-triggered, water-soluble precursor "click peptide"Atsuhiko Taniguchi
Department of Medicinal Chemistry, Center for Frontier Research in Medicinal Science, Kyoto Pharmaceutical University, Kyoto, Japan
Chembiochem 9:3055-65. 2008....
Driving force of binding of amyloid beta-protein to lipid bilayersKeisuke Ikeda
Graduate School of Pharmaceutical Sciences, Kyoto University, 46 29 Yoshida Shimoadachi cho, Sakyo ku, Kyoto 606 8501, Japan
Biochem Biophys Res Commun 370:525-9. 2008..These results suggested that hydrogen-bonding as well as hydrophobic interactions with sugar groups of glycolipids drive the membrane binding of Abeta-(1-40)...
Abeta polymerization through interaction with membrane gangliosidesKatsumi Matsuzaki
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
Biochim Biophys Acta 1801:868-77. 2010..In this review, we focus on the recent progress of GAbeta studies and highlight the possibility that ganglioside binding is the initial and common step in the development of a part of human misfolding-type amyloidoses, including AD...
Topological stability and self-association of a completely hydrophobic model transmembrane helix in lipid bilayersYoshiaki Yano
Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
Biochemistry 41:3073-80. 2002..Electron spin resonance spectra of 1-palmitoyl-2-stearoyl-(14-doxyl)-sn-glycero-3-phosphocholine demonstrated the presence of a motionally restricted component at lower temperatures...
Membrane insertion and dissociation processes of a model transmembrane helixYoshiaki Yano
Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
Biochemistry 41:12407-13. 2002..On the basis of these observations, a model for the helix insertion/dissociation processes was discussed...
Translocation of analogues of the antimicrobial peptides magainin and buforin across human cell membranesKenta Takeshima
Graduate School of Biostudies, Kyoto University, Sakyo-ku, Japan
J Biol Chem 278:1310-5. 2003..However, the mechanism appeared to be different from that of the parent peptide...
High-performance frontal analysis of the binding of thyroxine enantiomers to human serum albuminTomoko Kimura
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, 606-8501, Japan
Pharm Res 22:667-75. 2005....
Biantennary glycans as well as genetic variants of alpha1-acid glycoprotein control the enantioselectivity and binding affinity of oxybutyninTomoko Kimura
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
Pharm Res 23:1038-42. 2006..CONCLUSIONS: Both genetic variants and glycan structures significantly contribute to the enantioselectivity and the binding affinity of OXY...
Measurement of thermodynamic parameters for hydrophobic mismatch 2: intermembrane transfer of a transmembrane helixYoshiaki Yano
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
Biochemistry 45:3379-85. 2006....
Measurement of thermodynamic parameters for hydrophobic mismatch 1: self-association of a transmembrane helixYoshiaki Yano
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
Biochemistry 45:3370-8. 2006..The new concept of dipole-dipole interaction as a basic driving force of helix dimerization will become a basis for understanding the structural and functional modifications in response to hydrophobic mismatch...
Design of a soluble transmembrane helix for measurements of water-membrane partitioningYoshiaki Yano
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
J Phys Chem B 114:1925-31. 2010..6 kJ mol(-1). Thus, the transmembrane helix was found to be a useful template for thermodynamic measurements of the partitioning of amino acids from water to the hydrophobic core of membranes...
Magainin 2 in action: distinct modes of membrane permeabilization in living bacterial and mammalian cellsYuichi Imura
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
Biophys J 95:5757-65. 2008..Thus, the distinct membrane-permeabilizing processes of magainin 2 in bacterial and mammalian cells were, to the best of our knowledge, visualized and characterized in detail for the first time...
Action mechanism of PEGylated magainin 2 analogue peptideYuichi Imura
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
Biochim Biophys Acta 1768:2578-85. 2007..At the same time, the antimicrobial activity was weakened only by 4 fold. The effects of PEGylation on the activity of magainin were compared with those for tachyplesin...
Simultaneous determination of unbound thyroid hormones in human plasma using high performance frontal analysis with electrochemical detectionTomoko Kimura
Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
J Pharm Biomed Anal 38:204-9. 2005..The CV% values of intra-day and inter-day assays (n=15) were less than 14.9% for T4, 14.5% for T3 and 13.2% for rT3. The present system was also applied to a competitive binding study of these thyroid hormones in human plasma...
Intracellular third loop-C-terminal tail interaction in prostaglandin EP3beta receptorYoshiaki Yano
Graduate School of Pharmaceutical Sciences, Kyoto University, 46 29 Yoshida Shimoadachi cho, Sakyo ku, Kyoto 606 8501, Japan
Biochem Biophys Res Commun 371:846-9. 2008..These results demonstrate for the first time specific interaction between the intracellular third loop and the C-terminus. A model is proposed for the activation of the receptor...
Interaction of a magainin-PGLa hybrid peptide with membranes: insight into the mechanism of synergismMinoru Nishida
Graduate School of Biostudies, Kyoto University, Sakyo ku, Kyoto 606 8501, Japan
Biochemistry 46:14284-90. 2007..Thus, the separate production of mutually recognizing peptides without cross-linking appears to be a good way to increase selective toxicity...
Environment- and mutation-dependent aggregation behavior of Alzheimer amyloid beta-proteinNaoki Yamamoto
Department of Dementia Research, National Institute for Longevity Sciences, Obu, Japan
J Neurochem 90:62-9. 2004..These results suggest that there are favorable local environments for fibrillogenesis of amyloid beta-protein...
Cinnamycin (Ro 09-0198) promotes cell binding and toxicity by inducing transbilayer lipid movementAsami Makino
Supra-Biomolecular System Research Group, RIKEN Institute of Physical and Chemical Research, Frontier Research System, 2-1 Hirosawa, Wako-shi, Saitama 351-0198, Japan
J Biol Chem 278:3204-9. 2003..These results suggest that cinnamycin promotes its own binding to the cell and causes toxicity by inducing transbilayer lipid movement...
'Click peptide': a novel 'O-acyl isopeptide method' for peptide synthesis and chemical biology-oriented synthesis of amyloid beta peptide analoguesYouhei Sohma
Department of Medicinal Chemistry, Center for Frontier Research in Medicinal Science, 21st Century COE Program, Kyoto Pharmaceutical University, Yamashina-ku, Kyoto 607-8412
J Pept Sci 12:823-8. 2006....
A seed for Alzheimer amyloid in the brainHideki Hayashi
Department of Dementia Research, National Institute for Longevity Sciences, Obu 474-8522, Japan
J Neurosci 24:4894-902. 2004..These results imply a mechanism underlying the onset of AD and suggest that an endogenous seed can be a target of therapeutic strategy...
Amyloid beta-protein (Abeta)1-40 protects neurons from damage induced by Abeta1-42 in culture and in rat brainKun Zou
Department of Dementia Research, National Institute for Longevity Sciences, Aichi, Japan
J Neurochem 87:609-19. 2003..Our data suggest a mechanism by which elevated Abeta1-42/Abeta1-40 ratio accelerates the development of Alzheimer's disease (AD) in familial AD...
Cholesterol-dependent aggregation of amyloid beta-proteinKatsuhiko Yanagisawa
Department of Dementia Research, National Institute for Longevity Sciences, 36-3 Gengo, Morioka, Obu 474-8522, Japan
Ann N Y Acad Sci 977:384-6. 2002..The results of our current studies may provide a new insight into the molecular mechanism underlying the cholesterol-dependent development of AD...
Cross-seeding of wild-type and hereditary variant-type amyloid beta-proteins in the presence of gangliosidesNaoki Yamamoto
Department of Alzheimer s Disease Research, National Institute for Longevity Sciences, National Center for Geriatrics and Gerontology, Morioka, Obu, Japan
J Neurochem 95:1167-76. 2005..This study suggests that cross-seeding can occur between wild and hereditary variant-type amyloid beta-proteins despite differences in their amino acid sequences...
Specific interactions of the antimicrobial peptide cyclic beta-sheet tachyplesin I with lipopolysaccharidesYutaka Hirakura
Advanced Research Center for Human Sciences, Waseda University, Nishi-Tokyo, Tokyo 202-0021, Japan
Biochim Biophys Acta 1562:32-6. 2002..The recognition site was the lipid A moiety and the cyclic structure was crucial to this specific binding. The cyclic structure also endowed the peptide with very rapid outer membrane (OM) permeabilization...
