Ali Masoudi-Nejad

Summary

Affiliation: Kyoto University
Country: Japan

Publications

  1. ncbi request reprint An alternative to radiation hybrid mapping for large-scale genome analysis in barley
    Ali Masoudi-Nejad
    Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Kitashirakawa Oiwake cho, 606 8502 Sakyo Ku, Kyoto, Japan
    Mol Genet Genomics 274:589-94. 2005
  2. pmc EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments
    Ali Masoudi-Nejad
    Laboratory of Bioknowledge Systems, Bioinformatics Center, Institute for Chemical Research, Kyoto University, Gokasho Uji, Kyoto 611 0011, Japan
    Nucleic Acids Res 34:W459-62. 2006
  3. pmc EGENES: transcriptome-based plant database of genes with metabolic pathway information and expressed sequence tag indices in KEGG
    Ali Masoudi-Nejad
    Laboratory of Bioknowledge Systems, Bioinformatics Center, Institute for Chemical Research, Kyoto University, Gokasho Uji, Kyoto 611 0011, Japan
    Plant Physiol 144:857-66. 2007
  4. ncbi request reprint Dissection of rye chromosome 1R in common wheat
    Masashi Tsuchida
    Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Kyoto, Japan
    Genes Genet Syst 83:43-53. 2008
  5. ncbi request reprint KEGG bioinformatics resource for plant genomics research
    Ali Masoudi Nejad
    Laboratory of Bioknowledge Systems, Bioinformatics Center, Institute for Chemical Research, Kyoto University, Gokasho Uji, Kyoto, Japan
    Methods Mol Biol 406:437-58. 2007
  6. ncbi request reprint Molecular cloning, sequencing, and chromosome mapping of a 1A-encoded omega-type prolamin sequence from wheat
    Ali Masoudi-Nejad
    Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Japan
    Genome 45:661-9. 2002

Detail Information

Publications6

  1. ncbi request reprint An alternative to radiation hybrid mapping for large-scale genome analysis in barley
    Ali Masoudi-Nejad
    Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Kitashirakawa Oiwake cho, 606 8502 Sakyo Ku, Kyoto, Japan
    Mol Genet Genomics 274:589-94. 2005
    ..In addition, mapping results are cumulative when using the same mapping set with new markers. The GC lines will be available from the National Bioresources Project-KOMUGI ( http://www.nbrp.jp/index.jsp )...
  2. pmc EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments
    Ali Masoudi-Nejad
    Laboratory of Bioknowledge Systems, Bioinformatics Center, Institute for Chemical Research, Kyoto University, Gokasho Uji, Kyoto 611 0011, Japan
    Nucleic Acids Res 34:W459-62. 2006
    ..The service provides an excellent bioinformatics tool to research groups in wet-lab as well as an all-in-one-tool for sequence handling to bioinformatics researchers...
  3. pmc EGENES: transcriptome-based plant database of genes with metabolic pathway information and expressed sequence tag indices in KEGG
    Ali Masoudi-Nejad
    Laboratory of Bioknowledge Systems, Bioinformatics Center, Institute for Chemical Research, Kyoto University, Gokasho Uji, Kyoto 611 0011, Japan
    Plant Physiol 144:857-66. 2007
    ..EGENES will be updated at least once a year. EGENES is publicly available and is accessible by the following link or by KEGG's navigation system (http://www.genome.jp/kegg-bin/create_kegg_menu?category=plants_egenes)...
  4. ncbi request reprint Dissection of rye chromosome 1R in common wheat
    Masashi Tsuchida
    Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Kyoto, Japan
    Genes Genet Syst 83:43-53. 2008
    ....
  5. ncbi request reprint KEGG bioinformatics resource for plant genomics research
    Ali Masoudi Nejad
    Laboratory of Bioknowledge Systems, Bioinformatics Center, Institute for Chemical Research, Kyoto University, Gokasho Uji, Kyoto, Japan
    Methods Mol Biol 406:437-58. 2007
    ..Because all the resources in KEGG follow the same architecture and design, an appraisal of EGENES should give readers an idea of the available information stored in KEGG and how to use them efficiently...
  6. ncbi request reprint Molecular cloning, sequencing, and chromosome mapping of a 1A-encoded omega-type prolamin sequence from wheat
    Ali Masoudi-Nejad
    Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Japan
    Genome 45:661-9. 2002
    ..By comparison of PCR and A-PAGE profiles for deletion stocks, its genomic location must be at a different locus from gli-Ala in 'Chinese Spring'...