Masayuki Miyazaki

Summary

Affiliation: Japan Agency for Marine-Earth Science and Technology
Country: Japan

Publications

  1. ncbi request reprint Geofilum rubicundum gen. nov., sp. nov., isolated from deep subseafloor sediment
    Masayuki Miyazaki
    Subsurface Geobiology Advanced Research SUGAR Project, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 62:1075-80. 2012
  2. ncbi request reprint Psychromonas japonica sp. nov., Psychromonas aquimarina sp. nov., Psychromonas macrocephali sp. nov. and Psychromonas ossibalaenae sp. nov., psychrotrophic bacteria isolated from sediment adjacent to sperm whale carcasses off Kagoshima, Japan
    Masayuki Miyazaki
    The XBR Group, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:1709-14. 2008
  3. ncbi request reprint Neptunomonas japonica sp. nov., an Osedax japonicus symbiont-like bacterium isolated from sediment adjacent to sperm whale carcasses off Kagoshima, Japan
    Masayuki Miyazaki
    Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:866-71. 2008
  4. ncbi request reprint Amphritea japonica sp. nov. and Amphritea balenae sp. nov., isolated from the sediment adjacent to sperm whale carcasses off Kagoshima, Japan
    Masayuki Miyazaki
    Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology, Yokosuka, Japan
    Int J Syst Evol Microbiol 58:2815-20. 2008
  5. ncbi request reprint Desulfothermus okinawensis sp. nov., a thermophilic and heterotrophic sulfate-reducing bacterium isolated from a deep-sea hydrothermal field
    Takuro Nunoura
    Subground Animalcule Retrieval SUGAR Program, Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 57:2360-4. 2007
  6. ncbi request reprint Alkalimonas collagenimarina sp. nov., a psychrotolerant, obligate alkaliphile isolated from deep-sea sediment
    Atsushi Kurata
    Extremobiosphere Research Center of Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 57:1549-53. 2007
  7. ncbi request reprint Hydrogenivirga okinawensis sp. nov., a thermophilic sulfur-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough
    Takuro Nunoura
    Subground Animalcule Retrieval SUGAR Program, Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:676-81. 2008
  8. ncbi request reprint Microbulbifer agarilyticus sp. nov. and Microbulbifer thermotolerans sp. nov., agar-degrading bacteria isolated from deep-sea sediment
    Masayuki Miyazaki
    Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:1128-33. 2008
  9. ncbi request reprint Thermosulfidibacter takaii gen. nov., sp. nov., a thermophilic, hydrogen-oxidizing, sulfur-reducing chemolithoautotroph isolated from a deep-sea hydrothermal field in the Southern Okinawa Trough
    Takuro Nunoura
    Subground Animalcule Retrieval SUGAR Program, Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:659-65. 2008
  10. ncbi request reprint Sulfurimonas paralvinellae sp. nov., a novel mesophilic, hydrogen- and sulfur-oxidizing chemolithoautotroph within the Epsilonproteobacteria isolated from a deep-sea hydrothermal vent polychaete nest, reclassification of Thiomicrospira denitrificans as Su
    Ken Takai
    Subground Animalcule Retrieval SUGAR Program, Japan Agency for Marine Earth Science and Technology, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 56:1725-33. 2006

Collaborators

Detail Information

Publications46

  1. ncbi request reprint Geofilum rubicundum gen. nov., sp. nov., isolated from deep subseafloor sediment
    Masayuki Miyazaki
    Subsurface Geobiology Advanced Research SUGAR Project, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 62:1075-80. 2012
    ..nov., sp. nov. is proposed. The type strain of Geofilum rubicundum is JAM-BA0501(T) ( = JCM 15548(T)  = NCIMB 14482(T))...
  2. ncbi request reprint Psychromonas japonica sp. nov., Psychromonas aquimarina sp. nov., Psychromonas macrocephali sp. nov. and Psychromonas ossibalaenae sp. nov., psychrotrophic bacteria isolated from sediment adjacent to sperm whale carcasses off Kagoshima, Japan
    Masayuki Miyazaki
    The XBR Group, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:1709-14. 2008
    ..nov. (two strains, type strain JAMM 0415(T)=JCM 14785(T)=ATCC BAA-1527(T)) and Psychromonas ossibalaenae sp. nov. (type strain JAMM 0738(T)=JCM 14786(T)=ATCC BAA-1528(T)) are proposed...
  3. ncbi request reprint Neptunomonas japonica sp. nov., an Osedax japonicus symbiont-like bacterium isolated from sediment adjacent to sperm whale carcasses off Kagoshima, Japan
    Masayuki Miyazaki
    Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:866-71. 2008
    ..The name Neptunomonas japonica sp. nov. (type strain JAMM 0745T=JCM 14595T=DSM 18939T) is proposed for the novel strains...
  4. ncbi request reprint Amphritea japonica sp. nov. and Amphritea balenae sp. nov., isolated from the sediment adjacent to sperm whale carcasses off Kagoshima, Japan
    Masayuki Miyazaki
    Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology, Yokosuka, Japan
    Int J Syst Evol Microbiol 58:2815-20. 2008
    ..nov. (type strain JAMM 1866(T)=JCM 14782(T)=ATCC BAA-1530(T); reference strain JAMM 1548) and Amphritea balenae sp. nov. (type strain JAMM 1525(T)=JCM 14781(T)=ATCC BAA-1529(T)) are proposed...
  5. ncbi request reprint Desulfothermus okinawensis sp. nov., a thermophilic and heterotrophic sulfate-reducing bacterium isolated from a deep-sea hydrothermal field
    Takuro Nunoura
    Subground Animalcule Retrieval SUGAR Program, Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 57:2360-4. 2007
    ..Based on physiological and phylogenetic characteristics, strain TFISO9(T) represents a novel species for which the name Desulfothermus okinawensis sp. nov. is proposed. The type strain is TFISO9(T) (=JCM 13304(T)=DSM 17375(T))...
  6. ncbi request reprint Alkalimonas collagenimarina sp. nov., a psychrotolerant, obligate alkaliphile isolated from deep-sea sediment
    Atsushi Kurata
    Extremobiosphere Research Center of Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 57:1549-53. 2007
    ..nov. is proposed. The type strain is AC40(T) (=JCM 14267(T)=NCIMB 14266(T))...
  7. ncbi request reprint Hydrogenivirga okinawensis sp. nov., a thermophilic sulfur-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough
    Takuro Nunoura
    Subground Animalcule Retrieval SUGAR Program, Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:676-81. 2008
    ..nov. The type strain of Hydrogenivirga okinawensis is LS12-2(T) (=JCM 13302(T)=DSM 17378(T))...
  8. ncbi request reprint Microbulbifer agarilyticus sp. nov. and Microbulbifer thermotolerans sp. nov., agar-degrading bacteria isolated from deep-sea sediment
    Masayuki Miyazaki
    Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:1128-33. 2008
    ..nov. (type strain JAMB A3T =JCM 14708T =DSM 19200T) and Microbulbifer thermotolerans sp. nov. (type strain JAMB A94T =JCM 14709T =DSM 19189T) are proposed...
  9. ncbi request reprint Thermosulfidibacter takaii gen. nov., sp. nov., a thermophilic, hydrogen-oxidizing, sulfur-reducing chemolithoautotroph isolated from a deep-sea hydrothermal field in the Southern Okinawa Trough
    Takuro Nunoura
    Subground Animalcule Retrieval SUGAR Program, Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:659-65. 2008
    ..nov., sp. nov., within the phylum Aquificae. The type strain of T. takaii is ABI70S6(T) (=JCM 13301(T)=DSM 17441(T))...
  10. ncbi request reprint Sulfurimonas paralvinellae sp. nov., a novel mesophilic, hydrogen- and sulfur-oxidizing chemolithoautotroph within the Epsilonproteobacteria isolated from a deep-sea hydrothermal vent polychaete nest, reclassification of Thiomicrospira denitrificans as Su
    Ken Takai
    Subground Animalcule Retrieval SUGAR Program, Japan Agency for Marine Earth Science and Technology, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 56:1725-33. 2006
    ..nov. (type strain DSM 1251(T)=ATCC 33889(T)). In addition, an emended description of the genus Sulfurimonas is proposed...
  11. ncbi request reprint Kosmotoga arenicorallina sp. nov. a thermophilic and obligately anaerobic heterotroph isolated from a shallow hydrothermal system occurring within a coral reef, southern part of the Yaeyama Archipelago, Japan, reclassification of Thermococcoides shenglien
    Takuro Nunoura
    Institute of Biogeosciences, Japan Agency for Marine Earth Science and Technology, Yokosuka, Japan
    Arch Microbiol 192:811-9. 2010
    ..5.1(T), we propose the reclassification of Thermococcoides shengliensis as Kosmotoga shengliensis comb. nov. (type strain 2SM-2(T)). In addition, an emended description of the genus Kosmotoga is proposed...
  12. ncbi request reprint Methylomarinovum caldicuralii gen. nov., sp. nov., a moderately thermophilic methanotroph isolated from a shallow submarine hydrothermal system, and proposal of the family Methylothermaceae fam. nov
    Hisako Hirayama
    Institute of Biogeosciences, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 64:989-99. 2014
    ..This suggests that unknown methanotrophs of this lineage inhabit various extreme environments. ..
  13. ncbi request reprint Sulfurivirga caldicuralii gen. nov., sp. nov., a novel microaerobic, thermophilic, thiosulfate-oxidizing chemolithoautotroph, isolated from a shallow marine hydrothermal system occurring in a coral reef, Japan
    Ken Takai
    Subground Animalcule Retrieval SUGAR Program, Japan Agency for Marine Earth Science and Technology, JAMSTEC, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 56:1921-9. 2006
    ..It is suggested that the novel isolates represent the type species of a new genus, for which the name Sulfurivirga caldicuralii gen. nov., sp. nov. (type strain MM1(T)=JCM 13439(T)=DSM 17737(T)) is proposed...
  14. ncbi request reprint Methylomarinum vadi gen. nov., sp. nov., a methanotroph isolated from two distinct marine environments
    Hisako Hirayama
    Institute of Biogeosciences, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 63:1073-82. 2013
    ..nov., sp. nov. is proposed. The type strain is IT-4(T) ( = JCM 13665(T) = DSM 18976(T))...
  15. ncbi request reprint Salinisphaera japonica sp. nov., a moderately halophilic bacterium isolated from the surface of a deep-sea fish, Malacocottus gibber, and emended description of the genus Salinisphaera
    Yasuhiro Shimane
    Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka shi, Kanagawa 237 0061, Japan
    Int J Syst Evol Microbiol 63:2180-5. 2013
    ..nov. is proposed. The type strain is YTM-1(T) (=JCM 18087(T)=CECT 8012(T)). An emended description of the genus Salinisphaera is also proposed...
  16. ncbi request reprint Sunxiuqinia faeciviva sp. nov., a facultatively anaerobic organoheterotroph of the Bacteroidetes isolated from deep subseafloor sediment
    Ken Takai
    Subsurface Geobiology Advanced Research SUGAR Project, Institute of Biogeosciences, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 63:1602-9. 2013
    ..doi.org/10.1601/nm.22746. We propose here a novel species of the genus Sunxiuqinia, with the name Sunxiuqinia faeciviva sp. nov. The type strain is JAM-BA0302(T) ( = JCM 15547(T)  = NCIMB 14481(T))...
  17. ncbi request reprint Loktanella cinnabarina sp. nov., isolated from a deep subseafloor sediment, and emended description of the genus Loktanella
    Taishi Tsubouchi
    Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka shi, Kanagawa 237 0061, Japan
    Int J Syst Evol Microbiol 63:1390-5. 2013
    ..nov. is proposed. The type strain is LL-001(T) ( = JCM 18161(T) = CECT 8072(T)). The description of the genus Loktanella is also emended...
  18. ncbi request reprint Salarchaeum japonicum gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea isolated from commercial salt
    Yasuhiro Shimane
    Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka shi, Kanagawa 237 0061, Japan
    Int J Syst Evol Microbiol 61:2266-70. 2011
    ..nov., as a representative of Salarchaeum japonicum sp. nov. The type strain is YSM-79(T) ( = JCM 16327(T)  = CECT 7563(T))...
  19. pmc Isolation and characterization of a thermophilic, obligately anaerobic and heterotrophic marine Chloroflexi bacterium from a Chloroflexi-dominated microbial community associated with a Japanese shallow hydrothermal system, and proposal for Thermomarinilin
    Takuro Nunoura
    Subsurface Geobiology and Advanced Research Project, Extremobiosphere Research Program, Institute of Biogeosciences, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Microbes Environ 28:228-35. 2013
    ..nov., is SW7(T) (=JCM15506(T)=KCTC5908(T))...
  20. ncbi request reprint Pelolinea submarina gen. nov., sp. nov., an anaerobic, filamentous bacterium of the phylum Chloroflexi isolated from subseafloor sediment
    Hiroyuki Imachi
    Subsurface Geobiology Advanced Research SUGAR Project, Extremobiosphere Research Program, Institute of Biogeosciences, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka, Kanagawa 237 0061, Japan
    Int J Syst Evol Microbiol 64:812-8. 2014
    ..nov., sp. nov., for strain MO-CFX1(T) ( = JCM 17238(T), = KCTC 5975(T)). This is the first formal description, to our knowledge, of an isolate of the phylum Chloroflexi from the deep-sea sedimentary environment. ..
  21. ncbi request reprint Shewanella surugensis sp. nov., Shewanella kaireitica sp. nov. and Shewanella abyssi sp. nov., isolated from deep-sea sediments of Suruga Bay, Japan
    Masayuki Miyazaki
    Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 56:1607-13. 2006
    ..nov. (two strains, type strain c941(T)=JCM 13041(T)=DSM 17171(T)) and Shewanella surugensis sp. nov. (type strain c959(T)=JCM 11835(T)=DSM 17177(T)) are proposed...
  22. ncbi request reprint Aquimarina macrocephali sp. nov., isolated from sediment adjacent to sperm whale carcasses
    Masayuki Miyazaki
    Institute of Biogeosciences BioGeos, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 60:2298-302. 2010
    ..Therefore, strain JAMB N27(T) represents a novel species, for which the name Aquimarina macrocephali sp. nov. is proposed. The type strain is JAMB N27(T) (=JCM 15542(T)=NCIMB 14508(T))...
  23. ncbi request reprint Marinitoga okinawensis sp. nov., a novel thermophilic and anaerobic heterotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough
    Takuro Nunoura
    Subground Animalcule Retrieval SUGAR Program, Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 57:467-71. 2007
    ..nov. is proposed. The type strain is TFS10-5(T) (=JCM 13303(T)=DSM 17373(T))...
  24. ncbi request reprint Thiofractor thiocaminus gen. nov., sp. nov., a novel hydrogen-oxidizing, sulfur-reducing epsilonproteobacterium isolated from a deep-sea hydrothermal vent chimney in the Nikko Seamount field of the northern Mariana Arc
    Hiroko Makita
    Subsurface Geobiology and Advanced Research Project, Extremobiosphere Research Program, Institute of Biogeosciences, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Arch Microbiol 194:785-94. 2012
    ....
  25. ncbi request reprint Microbulbifer chitinilyticus sp. nov. and Microbulbifer okinawensis sp. nov., chitin-degrading bacteria isolated from mangrove forests
    Atsushi Baba
    Extremobiosphere Research Program, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 61:2215-20. 2011
    ..nov. (type strain, ABABA212(T) = JCM 16148(T) = NCIMB 14577(T)) and Microbulbifer okinawensis sp. nov. (type strain, ABABA23(T) = JCM 16147(T) = NCIMB 14576(T); reference strain, ABABA211) are proposed...
  26. ncbi request reprint Methylothermus subterraneus sp. nov., a moderately thermophilic methanotroph isolated from a terrestrial subsurface hot aquifer
    Hisako Hirayama
    Institute of Biogeosciences, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka, 237 0061, Japan
    Int J Syst Evol Microbiol 61:2646-53. 2011
    ..nov. is proposed. The type strain is HTM55(T) ( = JCM 13664(T) = DSM 19750(T))...
  27. ncbi request reprint Dipodascus tetrasporeus sp. nov., an ascosporogenous yeast isolated from deep-sea sediments in the Japan Trench
    Takahiko Nagahama
    Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 58:1040-6. 2008
    ..The species is homothallic. The type strain of Dipodascus tetrasporeus sp. nov. is strain SY-277T (=NBRC 103136T =CBS 10071T)...
  28. ncbi request reprint Isolation and physiological characterization of two novel, piezophilic, thermophilic chemolithoautotrophs from a deep-sea hydrothermal vent chimney
    Ken Takai
    Sunground Animalcule Retrieval SUGAR Program, Japan Agency for Marine Earth Science and Technology, Yokosuka 237 0061, Japan
    Environ Microbiol 11:1983-97. 2009
    ..nov., sp. nov. is proposed. The piezophilic cultivation technique can be a powerful tool to isolate and characterize the previously uncultivated phylotypes in the deep-sea hydrothermal vent environments...
  29. ncbi request reprint Thalassospira povalilytica sp. nov., a polyvinyl-alcohol-degrading marine bacterium
    Yuichi Nogi
    Extremobiosphere Research Program, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 64:1149-53. 2014
    ..nov. (type strain Zumi 95(T) = JCM 18746(T) = DSM 26719(T)) is proposed. ..
  30. ncbi request reprint Cloning and sequencing of alginate lyase genes from deep-sea strains of Vibrio and Agarivorans and characterization of a new Vibrio enzyme
    Kohsuke Uchimura
    Institute of Biogeoscience, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima, Yokosuka, Japan
    Mar Biotechnol (NY) 12:526-33. 2010
    ..A9mT favorably degraded mannuronate polymer in alginate. We discussed substrate specificities of family 7 alginate lyases based on their conserved amino acid sequences...
  31. ncbi request reprint A new high-alkaline alginate lyase from a deep-sea bacterium Agarivorans sp
    Tohru Kobayashi
    Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima, Yokosuka 237 0061, Japan
    Extremophiles 13:121-9. 2009
    ..The deduced amino acid sequence showed the highest similarity to that of a Klebsiella enzyme, with only 54% identity...
  32. ncbi request reprint Purification and characterization of a novel alpha-agarase from a Thalassomonas sp
    Yukari Ohta
    Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima, Yokosuka 237 0061, Japan
    Curr Microbiol 50:212-6. 2005
    ..The pattern of agarose hydrolysis showed that the enzyme is an endo-type alpha-agarase, and the final main product was agarotetraose. The enzyme degraded not only agarose but also agarohexaose, neoagarohexaose, and porphyran...
  33. ncbi request reprint Methanoregula formicica sp. nov., a methane-producing archaeon isolated from methanogenic sludge
    Yuto Yashiro
    Subsurface Geobiology Advanced Research Team, Extremobiosphere Research Program, Institute of Biogeosciences, Japan Agency for Marine Earth Science and Technology, Yokosuka, Kanagawa 237 0061, Japan
    Int J Syst Evol Microbiol 61:53-9. 2011
    ..nov., with the type strain SMSP(T) (=NBRC 105244(T) =DSM 22288(T))...
  34. ncbi request reprint Natronoarchaeum mannanilyticum gen. nov., sp. nov., an aerobic, extremely halophilic archaeon isolated from commercial salt
    Yasuhiro Shimane
    Japan Agency for Marine Earth Science and Technology, Yokosuka shi, Kanagawa, Japan
    Int J Syst Evol Microbiol 60:2529-34. 2010
    ..nov., sp. nov. The type strain of Natronoarchaeum mannanilyticum is strain YSM-123(T) (=JCM 16328(T) =CECT 7565(T))...
  35. pmc Physiological and genomic features of a novel sulfur-oxidizing gammaproteobacterium belonging to a previously uncultivated symbiotic lineage isolated from a hydrothermal vent
    Takuro Nunoura
    Subsurface Geobiology and Advanced Research SUGAR Project, Extremobiosphere Research Program, Institute of Biogeosciences, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka, Japan
    PLoS ONE 9:e104959. 2014
    ....
  36. ncbi request reprint Sphaerochaeta multiformis sp. nov., an anaerobic, psychrophilic bacterium isolated from subseafloor sediment, and emended description of the genus Sphaerochaeta
    Masayuki Miyazaki
    Department of Subsurface Geobiology Analysis and Research D SUGAR, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka, Kanagawa 237 0061, Japan
    Int J Syst Evol Microbiol 64:4147-54. 2014
    ..nov. is proposed. The type strain is MO-SPC2(T) ( = JCM 17281(T) = DSM 23952(T)). An emended description of the genus Sphaerochaeta is also proposed. ..
  37. ncbi request reprint Marinobacter alkaliphilus sp. nov., a novel alkaliphilic bacterium isolated from subseafloor alkaline serpentine mud from Ocean Drilling Program Site 1200 at South Chamorro Seamount, Mariana Forearc
    Ken Takai
    Subground Animalcule Retrieval SUGAR Project, Frontier Research System for Extremophiles, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Extremophiles 9:17-27. 2005
    ..Based on the physiological and molecular properties of the new isolate, we propose the name Marinobacter alkaliphilus sp. nov., type strain: ODP1200D-1.5T (JCM12291T and ATCC BAA-889T)...
  38. pmc Cell proliferation at 122 degrees C and isotopically heavy CH4 production by a hyperthermophilic methanogen under high-pressure cultivation
    Ken Takai
    Subground Animalcule Retrieval Program, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Proc Natl Acad Sci U S A 105:10949-54. 2008
    ..4 per thousand, which is one of the smallest effects ever reported. This observation will shed light on the sources and production mechanisms of deep-sea methane...
  39. ncbi request reprint Spirochaeta psychrophila sp. nov., a psychrophilic spirochaete isolated from subseafloor sediment, and emended description of the genus Spirochaeta
    Masayuki Miyazaki
    Department of Subsurface Geobiology Analysis and Research D SUGAR, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka, Kanagawa 237 0061, Japan
    Int J Syst Evol Microbiol 64:2798-804. 2014
    ..To our knowledge, this is the first report of an isolate of the phylum Spirochaetes from a deep-sea sedimentary environment, and of an obligately psychrophilic nature...
  40. ncbi request reprint Parasphingopyxis lamellibrachiae gen. nov., sp. nov., isolated from a marine annelid worm
    Hiromi Uchida
    Extremobiosphere Research Program, Japan Agency for Marine Earth Science and Technology, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 62:2224-8. 2012
    ..nov., sp. nov. is proposed. The type strain of Parasphingopyxis lamellibrachiae gen. nov., sp. nov. is JAMH 0132(T) (= JCM 15549(T) = NCIMB 14486(T))...
  41. ncbi request reprint Molecular identification of the ichthyosporean protist "Pseudoperkinsus tapetis" from the mytilid mussel Adipicola pacifica associated with submerged whale carcasses in Japan
    Kiyotaka Takishita
    Extremobiosphere Research Center, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka, Kanagawa, Japan
    Mar Biotechnol (NY) 10:13-8. 2008
    ..These findings suggest that P. tapetis occurs worldwide and can associate with (and possibly infect) various types of bivalves. Further, a PCR method to specifically detect the P. tapetis cells in the host was also established...
  42. ncbi request reprint Povalibacter uvarum gen. nov., sp. nov., a polyvinyl-alcohol-degrading bacterium isolated from grapes
    Yuichi Nogi
    Research and Development Center for Marine Biosciences, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan International Graduate School of Arts and Sciences, Yokohama City University, 22 2 Seto, Kanazawa Ku, Yokohama 236 0027, Japan
    Int J Syst Evol Microbiol 64:2712-7. 2014
    ..nov., sp. nov. is proposed. The type strain of the type species is Zumi 37(T) ( = JCM 18749(T) = DSM 26723(T))...
  43. ncbi request reprint A long-term cultivation of an anaerobic methane-oxidizing microbial community from deep-sea methane-seep sediment using a continuous-flow bioreactor
    Masataka Aoki
    Department of Subsurface Geobiological Analysis and Research D SUGAR, Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka, Kanagawa, Japan Department of Environmental Systems Engineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan
    PLoS ONE 9:e105356. 2014
    ..Our data demonstrate that the DHS bioreactor system is a useful system for cultivating fastidious methane-seep-associated sedimentary microorganisms. ..
  44. ncbi request reprint Enzymatic properties and nucleotide and amino acid sequences of a thermostable beta-agarase from the novel marine isolate, JAMB-A94
    Yukari Ohta
    Japan Agency for Marine Earth Science and Technology JAMSTEC, Yokosuka, Japan
    Biosci Biotechnol Biochem 68:1073-81. 2004
    ..It was very thermostable up to 60 degrees C. The optimal pH and temperature for activity were around 7.0 and 55 degrees C respectively. The activity was not inhibited by EDTA (up to 100 mM) and sodium dodecyl sulfate (up to 30 mM)...
  45. ncbi request reprint Molecular evidence that deep-branching fungi are major fungal components in deep-sea methane cold-seep sediments
    Takahiko Nagahama
    Department of Foods and Human Nutrition, Higashi Chikushi Junior College, 5 1 1 Shimoitozu, Kokurakita ku, Kitakyusyu, 803 8511, Japan
    Environ Microbiol 13:2359-70. 2011
    ....
  46. ncbi request reprint [Clinical analysis of cases with multidrug-resistant tuberculosis--inpatients at National Hospitals in Kyushu between 1998 and 2003]
    Yoshiaki Tao
    Department of Respiratory Disease, National Hospital Organization Fukuoka Higashi Medical Center, 1 1 1, Chidori, Koga shi, Fukuoka 811 3115, Japan
    Kekkaku 81:1-5. 2006
    ..Clinical analysis of inpatients with multidrug-resistant tuberculosis in Kyushu...