Allison Piovesan

Summary

Affiliation: University of Bologna
Country: Italy

Publications

  1. doi Universal tight correlation of codon bias and pool of RNA codons (codonome): The genome is optimized to allow any distribution of gene expression values in the transcriptome from bacteria to humans
    Allison Piovesan
    Department of Experimental, Diagnostic and Specialty Medicine, Activity of Histology, Embryology and Applied Biology, University of Bologna, Via Belmeloro 8, 40126 Bologna BO, Italy
    Genomics 101:282-9. 2013
  2. doi Genome-scale analysis of human mRNA 5' coding sequences based on expressed sequence tag (EST) database
    Raffaella Casadei
    Center for Research in Molecular Genetics Fondazione CARISBO, Department of Histology, Embryology and Applied Biology, University of Bologna, Via Belmeloro 8, 40126 Bologna, Italy
    Genomics 100:125-30. 2012
  3. doi Characterization of human gene locus CYYR1: a complex multi-transcript system
    Raffaella Casadei
    Department for Life Quality Studies, University of Bologna, C so d Augusto 237, 47921, Rimini, RN, Italy
    Mol Biol Rep 41:6025-38. 2014
  4. doi An estimation of the number of cells in the human body
    Eva Bianconi
    Department of Experimental, Diagnostic and Specialty Medicine, University of Bologna, Bologna, Italy
    Ann Hum Biol 40:463-71. 2013
  5. doi A quantitative transcriptome reference map of the normal human brain
    Maria Caracausi
    Department of Experimental, Diagnostic and Specialty Medicine DIMES, Unit of Histology, Embryology and Applied Biology, University of Bologna, Via Belmeloro 8, 40126, Bologna, Italy
    Neurogenetics 15:267-87. 2014
  6. pmc Integrated differential transcriptome maps of Acute Megakaryoblastic Leukemia (AMKL) in children with or without Down Syndrome (DS)
    Maria Chiara Pelleri
    Department of Experimental, Diagnostic and Specialty Medicine DIMES, Unit of Histology, Embryology and Applied Biology, University of Bologna, Via Belmeloro 8, 40126, Bologna, BO, Italy
    BMC Med Genomics 7:63. 2014
  7. doi Improving mRNA 5' coding sequence determination in the mouse genome
    Allison Piovesan
    Department of Experimental, Diagnostic and Specialty Medicine DIMES, Unit of Histology, Embryology and Applied Biology, University of Bologna, Via Belmeloro 8, 40126, Bologna, BO, Italy
    Mamm Genome 25:149-59. 2014
  8. pmc Complexity of bidirectional transcription and alternative splicing at human RCAN3 locus
    Federica Facchin
    Center for Research in Molecular Genetics Fondazione CARISBO, Department of Histology, Embryology and Applied Biology, University of Bologna, Bologna, Italy
    PLoS ONE 6:e24508. 2011

Collaborators

Detail Information

Publications8

  1. doi Universal tight correlation of codon bias and pool of RNA codons (codonome): The genome is optimized to allow any distribution of gene expression values in the transcriptome from bacteria to humans
    Allison Piovesan
    Department of Experimental, Diagnostic and Specialty Medicine, Activity of Histology, Embryology and Applied Biology, University of Bologna, Via Belmeloro 8, 40126 Bologna BO, Italy
    Genomics 101:282-9. 2013
    ..The law of correlation between codon bias and codonome emerges as a property of the distribution and range of the number, sequence and expression level of the genes in a genome...
  2. doi Genome-scale analysis of human mRNA 5' coding sequences based on expressed sequence tag (EST) database
    Raffaella Casadei
    Center for Research in Molecular Genetics Fondazione CARISBO, Department of Histology, Embryology and Applied Biology, University of Bologna, Via Belmeloro 8, 40126 Bologna, Italy
    Genomics 100:125-30. 2012
    ..We also generated a list of 20,775 human mRNAs where the presence of an in-frame stop codon upstream of the known start codon indicates completeness of the coding sequence at 5' in the current form...
  3. doi Characterization of human gene locus CYYR1: a complex multi-transcript system
    Raffaella Casadei
    Department for Life Quality Studies, University of Bologna, C so d Augusto 237, 47921, Rimini, RN, Italy
    Mol Biol Rep 41:6025-38. 2014
    ....
  4. doi An estimation of the number of cells in the human body
    Eva Bianconi
    Department of Experimental, Diagnostic and Specialty Medicine, University of Bologna, Bologna, Italy
    Ann Hum Biol 40:463-71. 2013
    ..In particular, the reported total cell number of a human being ranges between 10(12) and 10(16) and it is widely mentioned without a proper reference...
  5. doi A quantitative transcriptome reference map of the normal human brain
    Maria Caracausi
    Department of Experimental, Diagnostic and Specialty Medicine DIMES, Unit of Histology, Embryology and Applied Biology, University of Bologna, Via Belmeloro 8, 40126, Bologna, Italy
    Neurogenetics 15:267-87. 2014
    ..This could be useful for the study of chromosomal alterations associated to cognitive impairment, such as trisomy 21, the most common genetic cause of intellectual disability. ..
  6. pmc Integrated differential transcriptome maps of Acute Megakaryoblastic Leukemia (AMKL) in children with or without Down Syndrome (DS)
    Maria Chiara Pelleri
    Department of Experimental, Diagnostic and Specialty Medicine DIMES, Unit of Histology, Embryology and Applied Biology, University of Bologna, Via Belmeloro 8, 40126, Bologna, BO, Italy
    BMC Med Genomics 7:63. 2014
    ..Several Authors have determined gene expression profiles by microarray analysis in DS and/or non-DS AMKL. Due to the rarity of AMKL, these studies were typically limited to a small group of samples...
  7. doi Improving mRNA 5' coding sequence determination in the mouse genome
    Allison Piovesan
    Department of Experimental, Diagnostic and Specialty Medicine DIMES, Unit of Histology, Embryology and Applied Biology, University of Bologna, Via Belmeloro 8, 40126, Bologna, BO, Italy
    Mamm Genome 25:149-59. 2014
    ..In conclusion, our results improve the determination of full-length 5' coding sequences and might be useful in order to reduce errors when studying mouse gene structure and function in biomedical research...
  8. pmc Complexity of bidirectional transcription and alternative splicing at human RCAN3 locus
    Federica Facchin
    Center for Research in Molecular Genetics Fondazione CARISBO, Department of Histology, Embryology and Applied Biology, University of Bologna, Bologna, Italy
    PLoS ONE 6:e24508. 2011
    ..The description of its number of transcripts, of their expression patterns and of their regulatory regions can be important to clarify the functions of RCAN3 gene in different pathways and cellular processes...