Michail M Yakimov

Summary

Affiliation: Istituto per l'Ambiente Marino Costiero
Country: Italy

Publications

  1. ncbi Microbial community of a saline mud volcano at San Biagio-Belpasso, Mt. Etna (Italy)
    Michail M Yakimov
    Istituto Sperimentale Talassografico, CNR, 98122 Messina, Italy
    Environ Microbiol 4:249-56. 2002
  2. ncbi Natural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons
    Michail M Yakimov
    Istituto per Ambiente Marino Costiere, IAMC-CNR, Sezione di Messina, Italy
    Environ Microbiol 7:1426-41. 2005
  3. ncbi Microbial community of a hydrothermal mud vent underneath the deep-sea anoxic brine lake Urania (eastern Mediterranean)
    Michail M Yakimov
    Istituto per l Ambiente Marino Costiero, CNR, Spianata S Raineri 86, 98122 Messina, Italy
    Orig Life Evol Biosph 37:177-88. 2007
  4. ncbi Obligate oil-degrading marine bacteria
    Michail M Yakimov
    Istituto per l Ambiente Marino Costiero, CNR, Messina 98122, Italy
    Curr Opin Biotechnol 18:257-66. 2007
  5. ncbi Primary producing prokaryotic communities of brine, interface and seawater above the halocline of deep anoxic lake L'Atalante, Eastern Mediterranean Sea
    Michail M Yakimov
    Institute for Coastal Marine Environment IAMC, CNR, Messina, Italy
    ISME J 1:743-55. 2007
  6. ncbi Contribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea)
    Michail M Yakimov
    Laboratory of Marine Molecular Microbiology, Institute for Coastal Marine Environment, CNR, Messina, Italy
    ISME J 5:945-61. 2011
  7. ncbi Crude oil-induced structural shift of coastal bacterial communities of rod bay (Terra Nova Bay, Ross Sea, Antarctica) and characterization of cultured cold-adapted hydrocarbonoclastic bacteria
    Michail M Yakimov
    Institute for Coastal Marine Environment, CNR, Spianata S Raineri 86, 98122 Messina, Italy
    FEMS Microbiol Ecol 49:419-32. 2004
  8. ncbi Thalassolituus oleivorans gen. nov., sp. nov., a novel marine bacterium that obligately utilizes hydrocarbons
    Michail M Yakimov
    Istituto per l Ambiente Marino Costiero, CNR Consiglio Nazionale Ricerche, Spianata San Raineri 86, 98122 Messina, Italy
    Int J Syst Evol Microbiol 54:141-8. 2004
  9. ncbi Genomic signatures of fifth autotrophic carbon assimilation pathway in bathypelagic Crenarchaeota
    Violetta La Cono
    Institute for Coastal Marine Environment IAMC, CNR, Spianata S Raineri 86, 98122 Messina, Italy
    Microb Biotechnol 3:595-606. 2010
  10. ncbi Study of bacterial communities in Antarctic coastal waters by a combination of 16S rRNA and 16S rDNA sequencing
    Gabriella Gentile
    Institute for Coastal Marine Environment IAMC, CNR, Spianata S Raineri 86, 98122 Messina, Italy
    Environ Microbiol 8:2150-61. 2006

Collaborators

Detail Information

Publications23

  1. ncbi Microbial community of a saline mud volcano at San Biagio-Belpasso, Mt. Etna (Italy)
    Michail M Yakimov
    Istituto Sperimentale Talassografico, CNR, 98122 Messina, Italy
    Environ Microbiol 4:249-56. 2002
    ....
  2. ncbi Natural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons
    Michail M Yakimov
    Istituto per Ambiente Marino Costiere, IAMC-CNR, Sezione di Messina, Italy
    Environ Microbiol 7:1426-41. 2005
    ....
  3. ncbi Microbial community of a hydrothermal mud vent underneath the deep-sea anoxic brine lake Urania (eastern Mediterranean)
    Michail M Yakimov
    Istituto per l Ambiente Marino Costiero, CNR, Spianata S Raineri 86, 98122 Messina, Italy
    Orig Life Evol Biosph 37:177-88. 2007
    ....
  4. ncbi Obligate oil-degrading marine bacteria
    Michail M Yakimov
    Istituto per l Ambiente Marino Costiero, CNR, Messina 98122, Italy
    Curr Opin Biotechnol 18:257-66. 2007
    ..These and other studies have revealed the potential of OHCB for multiple biotechnological applications that include not only oil pollution mitigation, but also biopolymer production and biocatalysis...
  5. ncbi Primary producing prokaryotic communities of brine, interface and seawater above the halocline of deep anoxic lake L'Atalante, Eastern Mediterranean Sea
    Michail M Yakimov
    Institute for Coastal Marine Environment IAMC, CNR, Messina, Italy
    ISME J 1:743-55. 2007
    ..These autotrophic microbes are thus the basis of the food webs populating these deep-sea ecosystems...
  6. ncbi Contribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea)
    Michail M Yakimov
    Laboratory of Marine Molecular Microbiology, Institute for Coastal Marine Environment, CNR, Messina, Italy
    ISME J 5:945-61. 2011
    ....
  7. ncbi Crude oil-induced structural shift of coastal bacterial communities of rod bay (Terra Nova Bay, Ross Sea, Antarctica) and characterization of cultured cold-adapted hydrocarbonoclastic bacteria
    Michail M Yakimov
    Institute for Coastal Marine Environment, CNR, Spianata S Raineri 86, 98122 Messina, Italy
    FEMS Microbiol Ecol 49:419-32. 2004
    ..Eighteen isolates were found to be members of gamma-Proteobacteria, while the remainder were representatives of alpha-Proteobacteria, CFB and high G + C divisions...
  8. ncbi Thalassolituus oleivorans gen. nov., sp. nov., a novel marine bacterium that obligately utilizes hydrocarbons
    Michail M Yakimov
    Istituto per l Ambiente Marino Costiero, CNR Consiglio Nazionale Ricerche, Spianata San Raineri 86, 98122 Messina, Italy
    Int J Syst Evol Microbiol 54:141-8. 2004
    ..On the basis of the analyses performed, Thalassolituus oleivorans gen. nov., sp. nov. is described. Strain MIL-1T (=DSM 14913T=LMG 21420T) is the type and only strain of T. oleivorans...
  9. ncbi Genomic signatures of fifth autotrophic carbon assimilation pathway in bathypelagic Crenarchaeota
    Violetta La Cono
    Institute for Coastal Marine Environment IAMC, CNR, Spianata S Raineri 86, 98122 Messina, Italy
    Microb Biotechnol 3:595-606. 2010
    ..e. at the same site and depth used for metagenomic library construction...
  10. ncbi Study of bacterial communities in Antarctic coastal waters by a combination of 16S rRNA and 16S rDNA sequencing
    Gabriella Gentile
    Institute for Coastal Marine Environment IAMC, CNR, Spianata S Raineri 86, 98122 Messina, Italy
    Environ Microbiol 8:2150-61. 2006
    ..Obtained results clearly demonstrate that combination of 16S rDNA and 16S rRNA gene sequencing is preferred approach to have a more reliable vision on the composition of microbial communities...
  11. ncbi Oleispira antarctica gen. nov., sp. nov., a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water
    Michail M Yakimov
    Istituto Sperimentale Talassografico, CNR, Spianata San Raineri 86, 98122 Messina, Italy
    Int J Syst Evol Microbiol 53:779-85. 2003
    ..nov., sp. nov.; strain RB-8(T) (= DSM 14852(T) = LMG 21398(T)) is the type strain...
  12. ncbi Predominant growth of Alcanivorax during experiments on "oil spill bioremediation" in mesocosms
    Simone Cappello
    Istituto Ambiente Marino Costiero IAMC of Messina IST CNR, Spianata S Raineri 86, 98122 Messina, Italy
    Microbiol Res 162:185-90. 2007
    ..This suggested that these bacteria played the most important role in the process of bioremediation of oil-contaminated marine environments...
  13. ncbi Unveiling microbial life in new deep-sea hypersaline Lake Thetis. Part I: Prokaryotes and environmental settings
    Violetta La Cono
    Institute for Coastal Marine Environment, CNR, Spianata S Raineri 86, 98122 Messina, Italy
    Environ Microbiol 13:2250-68. 2011
    ..Besides microaerophilic autotrophy, heterotrophic sulfate reduction, methanogenesis and anaerobic methane oxidation are likely the predominant processes driving the ecosystem of Thetis Lake...
  14. ncbi Thermoleophilum album and Thermoleophilum minutum are culturable representatives of group 2 of the Rubrobacteridae (Actinobacteria)
    Michail M Yakimov
    Istituto Sperimentale Talassografico, CNR Consiglio Nazionale delle Ricerche, Spianata Santa Raineri 86, 98122 Messina, Italy
    Int J Syst Evol Microbiol 53:377-80. 2003
    ....
  15. ncbi Stratified prokaryote network in the oxic-anoxic transition of a deep-sea halocline
    Daniele Daffonchio
    CoNISMa, Ulr Università degli Studi di Milano, DISTAM, 20133 Milan, Italy
    Nature 440:203-7. 2006
    ....
  16. ncbi Oleiphilaceae fam. nov., to include Oleiphilus messinensis gen. nov., sp. nov., a novel marine bacterium that obligately utilizes hydrocarbons
    Peter N Golyshin
    Division of Microbiology, GBF German Research Centre for Biotechnology, Braunschweig
    Int J Syst Evol Microbiol 52:901-11. 2002
    ..nov., sp. nov., within a new family, Oleiphilaceae fam. nov. Strain ME102T (= DSM 13489T = LMG 20357T) is the type and only strain of O. messinensis...
  17. ncbi Microbial enzymes mined from the Urania deep-sea hypersaline anoxic basin
    Manuel Ferrer
    Department of Microbiology, GBF German Research Centre for Biotechnology, 38124 Braunschweig, Germany
    Chem Biol 12:895-904. 2005
    ..One possesses the highest enantioselectivity toward an ester of the important chiral synthon solketal (E: 126[S]; 98%ee)...
  18. ncbi Limits of life in MgCl2-containing environments: chaotropicity defines the window
    John E Hallsworth
    Department of Biological Sciences, University of Essex, Colchester, CO4 3SQ, UK
    Environ Microbiol 9:801-13. 2007
    ..g. kosmotropic) solutes, is about 2.3 M...
  19. ncbi Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems
    Peter N Golyshin
    Division of Microbiology, GBF-German Research Centre for Biotechnology, Mascheroder Weg 1, 38124 Braunschweig, Germany
    J Biotechnol 106:215-20. 2003
    ..Annotation of the genome, metabolome modelling, and functional genomics, will soon reveal important insights into the genomic basis of the properties and physiology of this fascinating and globally important bacterium...
  20. ncbi Chaperonins govern growth of Escherichia coli at low temperatures
    Manuel Ferrer
    Nat Biotechnol 21:1266-7. 2003
  21. ncbi Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria
    Boyd A McKew
    Department of Biological Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK
    Environ Microbiol 9:1562-71. 2007
    ..In addition to providing insight into the factors limiting oil biodegradation over time, and the competition and synergism between HCB, these results add weight to the use of bioaugmentation in oil pollution mitigation strategies...
  22. ncbi Novel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora
    Manuel Ferrer
    Department of Microbiology, GBF German Research Centre for Biotechnology, Mascheroder Weg 1, 38124 Braunschweig, Germany
    Environ Microbiol 7:1996-2010. 2005
    ..The phylogenetic novelty of the hydrolases suggests that some of them may have potential for new applications in biocatalysis...
  23. ncbi Novel polyphenol oxidase mined from a metagenome expression library of bovine rumen: biochemical properties, structural analysis, and phylogenetic relationships
    Ana Beloqui
    Institute of Catalysis, Consejo Superior de Investigaciones Cientificas CSIC, Cantoblanco, 28049 Madrid, Spain
    J Biol Chem 281:22933-42. 2006
    ....