James F Reid

Summary

Affiliation: European Institute of Oncology
Country: Italy

Publications

  1. pmc Predicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen
    Sherene Loi
    Functional Genomics Unit, Jules Bordet Institute, Brussels, Belgium
    BMC Genomics 9:239. 2008
  2. ncbi request reprint Limits of predictive models using microarray data for breast cancer clinical treatment outcome
    James F Reid
    Department of Experimental Oncology, Istituto Nazionale per lo Studio e la Cura dei Tumori, Milan, Italy
    J Natl Cancer Inst 97:927-30. 2005
  3. ncbi request reprint Challenges in projecting clustering results across gene expression-profiling datasets
    Lara Lusa
    Department of Experimental Oncology, Fondazione IRCCS Istituto Nazionale dei Tumori, Milano, Italy
    J Natl Cancer Inst 99:1715-23. 2007
  4. doi request reprint Patterns and changes in gene expression following neo-adjuvant anti-estrogen treatment in estrogen receptor-positive breast cancer
    Vera Cappelletti
    Department of Experimental Oncology, Fondazione IRCCS Istituto Nazionale dei Tumori, Via Venezian 1, 20133 Milano, Italy
    Endocr Relat Cancer 15:439-49. 2008
  5. doi request reprint Chromosome band 17q21 in breast cancer: significant association between beclin 1 loss and HER2/NEU amplification
    Tiziana Negri
    Experimental Molecular Pathology Unit, Department of Pathology, Fondazione IRCCS Istituto Nazionale dei Tumori, Milan, Italy
    Genes Chromosomes Cancer 49:901-9. 2010
  6. doi request reprint Integrative approach for prioritizing cancer genes in sporadic colon cancer
    James F Reid
    Department of Experimental Oncology, Fondazione IRCCS Istituto Nazionale dei Tumori Milano, Italy
    Genes Chromosomes Cancer 48:953-62. 2009
  7. ncbi request reprint Identification of tumor-specific molecular signatures in intracranial ependymoma and association with clinical characteristics
    Piergiorgio Modena
    Unit of Molecular Cytogenetics, Istituto Nazionale per lo Studio e la Cura dei Tumori, Milano, Italy
    J Clin Oncol 24:5223-33. 2006
  8. ncbi request reprint New potential ligand-receptor signaling loops in ovarian cancer identified in multiple gene expression studies
    Giancarlo Castellano
    Unit of Molecular Therapies, Department of Experimental Oncology, Istituto Nazionale Tumori FIRC di Oncologia Molecolare, Milan, Italy
    Cancer Res 66:10709-19. 2006
  9. ncbi request reprint Molecular predictors of response and outcome in ovarian cancer
    Silvana Canevari
    Unit of Molecular Therapies, Department of Experimental Oncology, Istituto Nazionale Tumori, 20133 Milan, Italy
    Crit Rev Oncol Hematol 60:19-37. 2006
  10. ncbi request reprint Regulation of lipocalin-2 gene by the cancer chemopreventive retinoid 4-HPR
    Stefano Caramuta
    Department of Experimental Oncology, Istituto Nazionale Tumori, Milan, Italy
    Int J Cancer 119:1599-606. 2006

Collaborators

Detail Information

Publications15

  1. pmc Predicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen
    Sherene Loi
    Functional Genomics Unit, Jules Bordet Institute, Brussels, Belgium
    BMC Genomics 9:239. 2008
    ..Independent validation was performed using 362 tamoxifen-treated ER+ BC samples obtained from multiple institutions and treated with tamoxifen only in the adjuvant and metastatic settings...
  2. ncbi request reprint Limits of predictive models using microarray data for breast cancer clinical treatment outcome
    James F Reid
    Department of Experimental Oncology, Istituto Nazionale per lo Studio e la Cura dei Tumori, Milan, Italy
    J Natl Cancer Inst 97:927-30. 2005
    ....
  3. ncbi request reprint Challenges in projecting clustering results across gene expression-profiling datasets
    Lara Lusa
    Department of Experimental Oncology, Fondazione IRCCS Istituto Nazionale dei Tumori, Milano, Italy
    J Natl Cancer Inst 99:1715-23. 2007
    ....
  4. doi request reprint Patterns and changes in gene expression following neo-adjuvant anti-estrogen treatment in estrogen receptor-positive breast cancer
    Vera Cappelletti
    Department of Experimental Oncology, Fondazione IRCCS Istituto Nazionale dei Tumori, Via Venezian 1, 20133 Milano, Italy
    Endocr Relat Cancer 15:439-49. 2008
    ..Integration between neo-adjuvant therapy and transcriptional profiling has therefore the potential to identify therapeutic targets to be challenged for overcoming treatment resistance...
  5. doi request reprint Chromosome band 17q21 in breast cancer: significant association between beclin 1 loss and HER2/NEU amplification
    Tiziana Negri
    Experimental Molecular Pathology Unit, Department of Pathology, Fondazione IRCCS Istituto Nazionale dei Tumori, Milan, Italy
    Genes Chromosomes Cancer 49:901-9. 2010
    ..Our results suggest that, beclin 1 loss may contribute to genome instability and to a defective autophagy that may lead to tumoral cell death in presence of competent apoptosis or senescence pathways...
  6. doi request reprint Integrative approach for prioritizing cancer genes in sporadic colon cancer
    James F Reid
    Department of Experimental Oncology, Fondazione IRCCS Istituto Nazionale dei Tumori Milano, Italy
    Genes Chromosomes Cancer 48:953-62. 2009
    ....
  7. ncbi request reprint Identification of tumor-specific molecular signatures in intracranial ependymoma and association with clinical characteristics
    Piergiorgio Modena
    Unit of Molecular Cytogenetics, Istituto Nazionale per lo Studio e la Cura dei Tumori, Milano, Italy
    J Clin Oncol 24:5223-33. 2006
    ..To delineate clinically relevant molecular signatures of intracranial ependymoma...
  8. ncbi request reprint New potential ligand-receptor signaling loops in ovarian cancer identified in multiple gene expression studies
    Giancarlo Castellano
    Unit of Molecular Therapies, Department of Experimental Oncology, Istituto Nazionale Tumori FIRC di Oncologia Molecolare, Milan, Italy
    Cancer Res 66:10709-19. 2006
    ....
  9. ncbi request reprint Molecular predictors of response and outcome in ovarian cancer
    Silvana Canevari
    Unit of Molecular Therapies, Department of Experimental Oncology, Istituto Nazionale Tumori, 20133 Milan, Italy
    Crit Rev Oncol Hematol 60:19-37. 2006
    ..Furthermore, recent technological developments that enable simultaneous measurement of many parameters ("omic" approaches) hold the promise of identifying new molecular prognostic and predictive markers...
  10. ncbi request reprint Regulation of lipocalin-2 gene by the cancer chemopreventive retinoid 4-HPR
    Stefano Caramuta
    Department of Experimental Oncology, Istituto Nazionale Tumori, Milan, Italy
    Int J Cancer 119:1599-606. 2006
    ..Our results indicate that 4-HPR markedly induces LCN2 expression, but this event may not represent an apoptotic response...
  11. ncbi request reprint Automated DNA chip annotation tables at IFOM: the importance of synchronisation and cross-referencing of sequence databases
    Alessandro Guffanti
    FIRC Institute of Molecular Oncology, Milan, Italy
    Appl Bioinformatics 2:245-9. 2003
    ..We also report some comparative evidence about the importance of biological database synchronisation and cross-references in the process of generating annotation tables for DNA chips...
  12. ncbi request reprint Transcriptional network dynamics in macrophage activation
    Roland Nilsson
    Center for Genomics and Bioinformatics, Karolinska Institutet, Stockholm, Sweden
    Genomics 88:133-42. 2006
    ..We believe that our system approach presented here is applicable to understanding cellular differentiation in higher eukaryotes...
  13. pmc Complex Loci in human and mouse genomes
    Pär G Engström
    Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Bergen, Norway
    PLoS Genet 2:e47. 2006
    ..Complex loci are ubiquitous, host numerous nonconserved gene structures and lineage-specific exonification events, and may have a cis-regulatory impact on the member genes...
  14. ncbi request reprint Gene expression profiling of advanced ovarian cancer: characterization of a molecular signature involving fibroblast growth factor 2
    Loris De Cecco
    Laboratorio Nazionale CIB, Area Science Park, Padriciano 99, 34012 Trieste, Italy
    Oncogene 23:8171-83. 2004
    ..These findings raise mechanistic hypotheses on EOC pathogenesis and progression that might provide a rational underpinning for new therapeutic modalities...
  15. ncbi request reprint The meaning of it all: web-based resources for large-scale functional annotation and visualization of DNA microarray data
    Alessandro Guffanti
    IFOM FIRC Institute of Molecular Oncology, Via Adamello 16, 20139 Milano, Italy
    Trends Genet 18:589-92. 2002
    ..Here we discuss a selection of these tools with regards to their scope, limitations and ease of use...