Ido Amit

Summary

Affiliation: Weizmann Institute of Science
Country: Israel

Publications

  1. pmc Strategies to discover regulatory circuits of the mammalian immune system
    Ido Amit
    Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, Massachusetts 02142, USA
    Nat Rev Immunol 11:873-80. 2011
  2. pmc Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli
    Irit Gat-Viks
    Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA
    Nat Biotechnol 31:342-9. 2013
  3. pmc High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies
    Michal Rabani
    The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, Cambridge, MA 02140, USA
    Cell 159:1698-710. 2014
  4. pmc Semiconductor-based DNA sequencing of histone modification states
    Christine S Cheng
    Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA
    Nat Commun 4:2672. 2013

Collaborators

  • Andrea Pauli
  • Jeffrey E Gershenwald
  • Aviv Regev
  • Raktima Raychowdhury
  • Nir Hacohen
  • Michal Rabani
  • Christine S Cheng
  • Irit Gat-Viks
  • Deborah J Stumpo
  • Perry J Blackshear
  • Alexander F Schier
  • Nir Friedman
  • Marko Jovanovic
  • Michael Rooney
  • Lynda Chin
  • Manuel Garber
  • Roni Wilentzik
  • Dana Robbins
  • Yael Steuerman
  • Thomas Eisenhaure
  • Alex K Shalek
  • Mauricio O Carneiro
  • Chad Nusbaum
  • Austin Tzou
  • Alyssa Macbeth
  • Carsten Russ
  • Andrew Hollinger
  • Nicolas Chevrier
  • Niall Lennon
  • Scott Anderson
  • Kunal Rai

Detail Information

Publications4

  1. pmc Strategies to discover regulatory circuits of the mammalian immune system
    Ido Amit
    Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, Massachusetts 02142, USA
    Nat Rev Immunol 11:873-80. 2011
    ..Here, we review approaches for the reconstruction of signalling and transcriptional networks, with a focus on applications in the mammalian innate immune system...
  2. pmc Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli
    Irit Gat-Viks
    Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA
    Nat Biotechnol 31:342-9. 2013
    ..Our approach charts an experimental and analytic path to decipher the mechanisms underlying genetic variation in circuits that control responses to stimuli...
  3. pmc High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies
    Michal Rabani
    The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, Cambridge, MA 02140, USA
    Cell 159:1698-710. 2014
    ..Our study provides a new quantitative approach to discover transcriptional and posttranscriptional events that control dynamic changes in transcript levels using RNA sequencing data. ..
  4. pmc Semiconductor-based DNA sequencing of histone modification states
    Christine S Cheng
    Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA
    Nat Commun 4:2672. 2013
    ..We leverage this method for epigenetic profiling of tumour tissues. ..