Jaap Heringa

Summary

Publications

  1. Lelieveld S, Schütte J, Dijkstra M, Bawono P, Kinston S, Göttgens B, et al. ConBind: motif-aware cross-species alignment for the identification of functional transcription factor binding sites. Nucleic Acids Res. 2016;44:e72 pubmed publisher
    ..In addition to the analysis of known regulatory regions, our web tool is useful for the analysis of TFBSs on so far unknown DNA regions identified through ChIP-sequencing. ..
  2. Hou Q, Dutilh B, Huynen M, Heringa J, Feenstra K. Sequence specificity between interacting and non-interacting homologs identifies interface residues--a homodimer and monomer use case. BMC Bioinformatics. 2015;16:325 pubmed publisher
    ..The performance obtained indicates that this signal contains valuable information to identify protein-protein interaction sites. ..