Jaime Gongora

Summary

Publications

  1. pmc Australian and Pacific contributions to the genetic diversity of Norfolk Island feral chickens
    Shannan M Langford S
    Veterinary Science, University of Sydney, Sydney, NSW 2006, Australia
    BMC Genet 14:91. 2013
  2. pmc Strong purifying selection in endogenous retroviruses in the saltwater crocodile (Crocodylus porosus) in the Northern Territory of Australia
    Amanda Yoon Yee Chong
    RMC Gunn Building, B19, Faculty of Veterinary Science, University of Sydney, Sydney, NSW, 2006, Australia
    Mob DNA 3:20. 2012
  3. pmc Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes
    John A St John
    Institute for Genomics, Biocomputing and Biotechnology, Mississippi State University, Mississippi State, MS 39762, USA
    Genome Biol 13:415. 2012
  4. doi request reprint Evolution of MHC class I in the order Crocodylia
    Weerachai Jaratlerdsiri
    Faculty of Veterinary Science, University of Sydney, RMC Gunn Building B19, Sydney, NSW, 2006, Australia
    Immunogenetics 66:53-65. 2014
  5. pmc Evolution of endogenous retroviruses in the Suidae: evidence for different viral subpopulations in African and Eurasian host species
    Fabrícia F Nascimento
    Faculty of Veterinary Science, The University of Sydney, NSW 2006, Australia
    BMC Evol Biol 11:139. 2011
  6. doi request reprint MHC class I of saltwater crocodiles (Crocodylus porosus): polymorphism and balancing selection
    Weerachai Jaratlerdsiri
    Faculty of Veterinary Science, RMC Gunn Building, University of Sydney, Sydney, New South Wales 2006, Australia
    Immunogenetics 64:825-38. 2012
  7. pmc Selection and trans-species polymorphism of major histocompatibility complex class II genes in the order Crocodylia
    Weerachai Jaratlerdsiri
    Faculty of Veterinary Science, University of Sydney, Sydney, New South Wales, Australia
    PLoS ONE 9:e87534. 2014
  8. pmc Distribution of endogenous retroviruses in crocodilians
    Weerachai Jaratlerdsiri
    Centre for Advanced Technologies in Animal Genetics and Reproduction, Faculty of Veterinary Science, RMC Gunn Building, University of Sydney, Sydney, New South Wales 2006, Australia
    J Virol 83:10305-8. 2009
  9. doi request reprint Distinctive differences in long terminal repeat sequences between γ1 endogenous retroviruses of African and Eurasian suid species
    Fabrícia Ferreira do Nascimento
    Faculty of Veterinary Science, The University of Sydney, NSW 2006, Australia
    Infect Genet Evol 11:686-93. 2011
  10. pmc Comparative genome analyses reveal distinct structure in the saltwater crocodile MHC
    Weerachai Jaratlerdsiri
    Faculty of Veterinary Science, University of Sydney, Sydney, New South Wales 2006, Australia
    PLoS ONE 9:e114631. 2014

Collaborators

  • Lee G Miles
  • David A Ray
  • Simon Y W Ho
  • Jan Slapeta
  • Sylvain Marthey
  • Xueyan Shan
  • Kenji K Kojima
  • Eric Lyons
  • Fiona M McCarthy
  • Travis C Glenn
  • Olivier Hanotte
  • Greger Larson
  • Weerachai Jaratlerdsiri
  • Sally R Isberg
  • Damien P Higgins
  • Amanda Y Chong
  • Chris Moran
  • Benjamin T Haynes
  • Daniel G Peterson
  • Shannan M Langford S
  • Amanda Yoon Yee Chong
  • John A St John
  • Fabrícia Ferreira do Nascimento
  • Fabrícia F Nascimento
  • Michael Tristem
  • Stewart Lowden
  • Janine Deakin
  • Ricardo M Godinez
  • John St John
  • Rachael Gray
  • Jan Salomonsen
  • Arian F A Smit
  • Karsten Skjodt
  • Jerzy Jurka
  • Alan D Marcus
  • Bruce Baskerville
  • Spiridoula Kraitsek
  • Tracey D Tuberville
  • Shahid Yar Khan
  • Amanda M Cooksey
  • Erich D Jarvis
  • Brant C Faircloth
  • John E McCormack
  • Llewellyn D Densmore
  • David D Pollock
  • Sarah Jane Atkinson
  • Taisen Iguchi
  • Richard E Green
  • Kyria A Roessler
  • DANIEL E JANES
  • Todd A Castoe
  • Satomi Kohno
  • Roger H Sawyer
  • Nicholas G Crawford
  • Christopher Moran
  • Pauline Dalzell
  • Edward L Braun
  • Stacey L Lance
  • Brian J Raney
  • Federico G Hoffmann
  • Jason T Howard
  • Mark E Merchant
  • Jonathan M Howard
  • Jennifer C Drew
  • Jeremy R Sanford
  • Louis J Guillette
  • Scott V Edwards
  • ARKHAT ABZHANOV
  • Sally Isberg
  • Ap Jason de Koning
  • Nader Pourmand
  • Miryam Venegas-Anaya
  • Shane C Burgess
  • Eric W Triplett
  • Matthew K Fujita
  • Carl J Schmidt
  • Matthew J Greenwold
  • Bertrand Bed'hom
  • Michael Charleston
  • Chandramaya Siska Damayanti
  • Nantarika Chansue
  • Clara J Rodríguez-Zárate
  • Lorna Melville

Detail Information

Publications13

  1. pmc Australian and Pacific contributions to the genetic diversity of Norfolk Island feral chickens
    Shannan M Langford S
    Veterinary Science, University of Sydney, Sydney, NSW 2006, Australia
    BMC Genet 14:91. 2013
    ..We infer their phylogenetic relationships using a large dataset of novel sequences from Australian mainland domestic chickens and published sequences from around the world...
  2. pmc Strong purifying selection in endogenous retroviruses in the saltwater crocodile (Crocodylus porosus) in the Northern Territory of Australia
    Amanda Yoon Yee Chong
    RMC Gunn Building, B19, Faculty of Veterinary Science, University of Sydney, Sydney, NSW, 2006, Australia
    Mob DNA 3:20. 2012
    ..abstract:..
  3. pmc Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes
    John A St John
    Institute for Genomics, Biocomputing and Biotechnology, Mississippi State University, Mississippi State, MS 39762, USA
    Genome Biol 13:415. 2012
    ..The status of these projects and our planned analyses are described...
  4. doi request reprint Evolution of MHC class I in the order Crocodylia
    Weerachai Jaratlerdsiri
    Faculty of Veterinary Science, University of Sydney, RMC Gunn Building B19, Sydney, NSW, 2006, Australia
    Immunogenetics 66:53-65. 2014
    ..These findings enhance our understanding of MHC class I evolution and provide a preliminary framework for comparative studies of other non-avian reptiles as well as diversity assessment within Crocodylia. ..
  5. pmc Evolution of endogenous retroviruses in the Suidae: evidence for different viral subpopulations in African and Eurasian host species
    Fabrícia F Nascimento
    Faculty of Veterinary Science, The University of Sydney, NSW 2006, Australia
    BMC Evol Biol 11:139. 2011
    ..For comparison with γ1 PERVs, we have also analysed γ2 ERVs which in domestic pigs are known to be inactive and do not pose a risk to xenotransplantation...
  6. doi request reprint MHC class I of saltwater crocodiles (Crocodylus porosus): polymorphism and balancing selection
    Weerachai Jaratlerdsiri
    Faculty of Veterinary Science, RMC Gunn Building, University of Sydney, Sydney, New South Wales 2006, Australia
    Immunogenetics 64:825-38. 2012
    ....
  7. pmc Selection and trans-species polymorphism of major histocompatibility complex class II genes in the order Crocodylia
    Weerachai Jaratlerdsiri
    Faculty of Veterinary Science, University of Sydney, Sydney, New South Wales, Australia
    PLoS ONE 9:e87534. 2014
    ..The results presented herein provide an immunogenetic resource that may be used to further assess MHC diversity and functionality in Crocodylia. ..
  8. pmc Distribution of endogenous retroviruses in crocodilians
    Weerachai Jaratlerdsiri
    Centre for Advanced Technologies in Animal Genetics and Reproduction, Faculty of Veterinary Science, RMC Gunn Building, University of Sydney, Sydney, New South Wales 2006, Australia
    J Virol 83:10305-8. 2009
    ..Interestingly, CERV 1 was found only in crocodiles (Crocodylidae). The data generated here could assist future studies aimed at identifying orthologous and paralogous ERVs among crocodilians...
  9. doi request reprint Distinctive differences in long terminal repeat sequences between γ1 endogenous retroviruses of African and Eurasian suid species
    Fabrícia Ferreira do Nascimento
    Faculty of Veterinary Science, The University of Sydney, NSW 2006, Australia
    Infect Genet Evol 11:686-93. 2011
    ....
  10. pmc Comparative genome analyses reveal distinct structure in the saltwater crocodile MHC
    Weerachai Jaratlerdsiri
    Faculty of Veterinary Science, University of Sydney, Sydney, New South Wales 2006, Australia
    PLoS ONE 9:e114631. 2014
    ..These observations suggest that the structure of the saltwater crocodile MHC, and other crocodilians, can help determine the MHC that was present in the ancestors of archosaurs. ..
  11. pmc Indo-European and Asian origins for Chilean and Pacific chickens revealed by mtDNA
    Jaime Gongora
    Centre for Advanced Technologies in Animal Genetics and Reproduction, Faculty of Veterinary Science, University of Sydney, Sydney NSW 2006, Australia
    Proc Natl Acad Sci U S A 105:10308-13. 2008
    ....
  12. doi request reprint Unexpected absence of genetic separation of a highly diverse population of hookworms from geographically isolated hosts
    Benjamin T Haynes
    Faculty of Veterinary Science, The University of Sydney, New South Wales, Australia
    Infect Genet Evol 28:192-200. 2014
    ..cinerea populations and highlights the value of studies of parasite diversity and dispersal to challenge our understanding of parasite and host ecology. ..
  13. pmc Evolution and gene capture in ancient endogenous retroviruses - insights from the crocodilian genomes
    Amanda Y Chong
    Faculty of Veterinary Science, University of Sydney, Sydney, NSW, 2006, Australia
    Retrovirology 11:71. 2014
    ..Here we investigate the diversity, distribution and evolution of ERVs from the genomes of three key crocodilian species, and outline the key processes driving crocodilian ERV proliferation and evolution...