David Ghosh

Summary

Publications

  1. pmc Object oriented Transcription Factors Database (ooTFD)
    D Ghosh
    Institute for Transcriptional Informatics, PO Box 2556, Pittsburgh, PA 15230 2556, USA
    Nucleic Acids Res 27:315-7. 1999
  2. pmc Object-oriented transcription factors database (ooTFD)
    D Ghosh
    Institute for Transcriptional Informatics, PO Box 2556, Pittsburgh, PA 15230, USA
    Nucleic Acids Res 28:308-10. 2000
  3. ncbi request reprint High throughput and global approaches to gene expression
    D Ghosh
    Institute for Transcriptional Informatics, PO Box 2556, Pittsburgh, PA 15230, USA
    Comb Chem High Throughput Screen 3:411-20. 2000
  4. ncbi request reprint Transcription factor therapeutics: long-shot or lodestone
    David Ghosh
    Institute for Transcriptional Informatics, PO Box 2556, Pittsburgh, PA 15230, USA
    Curr Med Chem 12:691-701. 2005
  5. pmc OOTFD (Object-Oriented Transcription Factors Database): an object-oriented successor to TFD
    D Ghosh
    Institute for Transcriptional Informatics, PO Box 2556, Pittsburgh, PA 15230, USA
    Nucleic Acids Res 26:360-2. 1998
  6. ncbi request reprint A novel nk-2-related transcription factor associated with human fetal liver and hepatocellular carcinoma
    G A Apergis
    Department of Pathology, School of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, USA
    J Biol Chem 273:2917-25. 1998
  7. pmc Definition and prediction of the full range of transcription factor binding sites--the hepatocyte nuclear factor 1 dimeric site
    Joseph Locker
    Department of Pathology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA
    Nucleic Acids Res 30:3809-17. 2002

Collaborators

  • Joseph Locker
  • G A Apergis
  • Phuong Van Luc
  • Jianhua Zheng
  • N Crawford
  • P Wen
  • J Locker
  • W R Vorachek
  • C M Steppan

Detail Information

Publications7

  1. pmc Object oriented Transcription Factors Database (ooTFD)
    D Ghosh
    Institute for Transcriptional Informatics, PO Box 2556, Pittsburgh, PA 15230 2556, USA
    Nucleic Acids Res 27:315-7. 1999
    ..ooTFD and associated tools and resources can be accessed at http://www.ifti.org/..
  2. pmc Object-oriented transcription factors database (ooTFD)
    D Ghosh
    Institute for Transcriptional Informatics, PO Box 2556, Pittsburgh, PA 15230, USA
    Nucleic Acids Res 28:308-10. 2000
    ..In the past year, a few additions and changes were made to this database and associated tools, which are accessible through the IFTI-MIRAGE web site at http://www.ifti.org/..
  3. ncbi request reprint High throughput and global approaches to gene expression
    D Ghosh
    Institute for Transcriptional Informatics, PO Box 2556, Pittsburgh, PA 15230, USA
    Comb Chem High Throughput Screen 3:411-20. 2000
    ..The applicability of this technology to general problems in biomedicine is also discussed...
  4. ncbi request reprint Transcription factor therapeutics: long-shot or lodestone
    David Ghosh
    Institute for Transcriptional Informatics, PO Box 2556, Pittsburgh, PA 15230, USA
    Curr Med Chem 12:691-701. 2005
    ..A relatively recent approach termed "transcription therapy" has been applied for a number of drugs in development, which may potentially provide a new avenue for targeting transcription factors for therapeutic purposes...
  5. pmc OOTFD (Object-Oriented Transcription Factors Database): an object-oriented successor to TFD
    D Ghosh
    Institute for Transcriptional Informatics, PO Box 2556, Pittsburgh, PA 15230, USA
    Nucleic Acids Res 26:360-2. 1998
    ..ooTFD and associated tools and services can be accessed at http://www.isbi.net/..
  6. ncbi request reprint A novel nk-2-related transcription factor associated with human fetal liver and hepatocellular carcinoma
    G A Apergis
    Department of Pathology, School of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, USA
    J Biol Chem 273:2917-25. 1998
    ..Moreover, the nk-2-related genes are developmental regulators, and nkx-2.8 is the first such factor associated with liver development...
  7. pmc Definition and prediction of the full range of transcription factor binding sites--the hepatocyte nuclear factor 1 dimeric site
    Joseph Locker
    Department of Pathology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA
    Nucleic Acids Res 30:3809-17. 2002
    ..This process accurately predicted even weak binding sites that were significantly different from the consensus sequence. The predictions also showed a direct correlation with measured protein binding...