January Weiner

Summary

Country: Germany

Publications

  1. ncbi request reprint The evolution of domain arrangements in proteins and interaction networks
    E Bornberg-Bauer
    Bioinformatics Division, School of Biological Sciences, University of Munster, Schlossplatz 4, 48143 Münster, Germany
    Cell Mol Life Sci 62:435-45. 2005
  2. ncbi request reprint Evolution of circular permutations in multidomain proteins
    January Weiner
    Division of Bioinformatics, School of Biological Sciences, University of Munster, Schlossplatz 4, Munster, Germany
    Mol Biol Evol 23:734-43. 2006
  3. pmc Just how versatile are domains?
    January Weiner
    Institute for Evolution and Biodiversity, Evolutionary Bioinformatics Group, Westphalian Wilhelms University, Munster, Germany
    BMC Evol Biol 8:285. 2008
  4. ncbi request reprint Automated Improvement of Domain ANnotations using context analysis of domain arrangements (AIDAN)
    Francois Beaussart
    Evolutionary Bioinformatics, Institute for Evolution and Biodiversity, Westfalische Wilhelms University, Schlossplatz 4, D48149 Munster, Germany
    Bioinformatics 23:1834-6. 2007
  5. doi request reprint The Crohn's disease susceptibility gene DLG5 as a member of the CARD interaction network
    Frauke Friedrichs
    Department of Genetic Epidemiology, Leibniz Institute for Arteriosclerosis Research, University Munster, Munster, Germany
    J Mol Med (Berl) 86:423-32. 2008
  6. ncbi request reprint Domain deletions and substitutions in the modular protein evolution
    January Weiner
    Division of Bioinformatics, School of Biological Sciences, The Westfalian Wilhelms University of Münster, Germany
    FEBS J 273:2037-47. 2006
  7. ncbi request reprint Rapid motif-based prediction of circular permutations in multi-domain proteins
    January Weiner
    Division of Bioinformatics, School of Biology, Institute of Botany, The Westphalian Wilhelm s University of Münster Schlossplatz 4 D48149 Münster, Germany
    Bioinformatics 21:932-7. 2005
  8. doi request reprint Expressed sequence tags from the flower pathogen Claviceps purpurea
    Birgitt Oeser
    Institut fur Botanik, Westf Wilhelms Universität Münster, Schlossgarten 3, D 48149 Munster, Germany
    Mol Plant Pathol 10:665-84. 2009
  9. doi request reprint DoMosaics: software for domain arrangement visualization and domain-centric analysis of proteins
    Andrew D Moore
    Institute for Evolution and Biodiversity, Hüfferstrasse 1, Westphalian Wilhelms University Münster, 48147 Münster, Germany, and Max Planck Institute for Infection Biology, Chariteplatz 1, 10117 Berlin, Germany
    Bioinformatics 30:282-3. 2014
  10. pmc Comparative analysis of expressed sequence tag (EST) libraries in the seagrass Zostera marina subjected to temperature stress
    Thorsten B H Reusch
    Institute for Evolution and Biodiversity, Plant Evolutionary Ecology, University of Munster, Munster, Germany
    Mar Biotechnol (NY) 10:297-309. 2008

Collaborators

Detail Information

Publications13

  1. ncbi request reprint The evolution of domain arrangements in proteins and interaction networks
    E Bornberg-Bauer
    Bioinformatics Division, School of Biological Sciences, University of Munster, Schlossplatz 4, 48143 Münster, Germany
    Cell Mol Life Sci 62:435-45. 2005
    ..In this review we summarise facts and hypotheses about the evolution of domains in multi-domain proteins and protein complexes, and the tools and data resources available to study them...
  2. ncbi request reprint Evolution of circular permutations in multidomain proteins
    January Weiner
    Division of Bioinformatics, School of Biological Sciences, University of Munster, Schlossplatz 4, Munster, Germany
    Mol Biol Evol 23:734-43. 2006
    ..This can be partly attributed to highly mobile domains. Duplication/deletion has been found in modular proteins such as peptide synthases...
  3. pmc Just how versatile are domains?
    January Weiner
    Institute for Evolution and Biodiversity, Evolutionary Bioinformatics Group, Westphalian Wilhelms University, Munster, Germany
    BMC Evol Biol 8:285. 2008
    ..This ability, which is often referred to as versatility or promiscuity of domains, its a random evolutionary model in which a domain's promiscuity is based on its relative frequency of domains...
  4. ncbi request reprint Automated Improvement of Domain ANnotations using context analysis of domain arrangements (AIDAN)
    Francois Beaussart
    Evolutionary Bioinformatics, Institute for Evolution and Biodiversity, Westfalische Wilhelms University, Schlossplatz 4, D48149 Munster, Germany
    Bioinformatics 23:1834-6. 2007
    ..AVAILABILITY: http://www.uni-muenster.de/Evolution/ebb/Services/AIDAN. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online...
  5. doi request reprint The Crohn's disease susceptibility gene DLG5 as a member of the CARD interaction network
    Frauke Friedrichs
    Department of Genetic Epidemiology, Leibniz Institute for Arteriosclerosis Research, University Munster, Munster, Germany
    J Mol Med (Berl) 86:423-32. 2008
    ..As there is substantial crosstalk between CARD-mediated pathways, both CD susceptibility genes, NOD2 and DLG5, may interact functionally to contribute to CD risk...
  6. ncbi request reprint Domain deletions and substitutions in the modular protein evolution
    January Weiner
    Division of Bioinformatics, School of Biological Sciences, The Westfalian Wilhelms University of Münster, Germany
    FEBS J 273:2037-47. 2006
    ..This is explained by a case study on the bacterial formate dehydrogenases...
  7. ncbi request reprint Rapid motif-based prediction of circular permutations in multi-domain proteins
    January Weiner
    Division of Bioinformatics, School of Biology, Institute of Botany, The Westphalian Wilhelm s University of Münster Schlossplatz 4 D48149 Münster, Germany
    Bioinformatics 21:932-7. 2005
    ..Several true CPs which have not been reported in literature so far could be identified from Swiss-Prot/TrEMBL within minutes...
  8. doi request reprint Expressed sequence tags from the flower pathogen Claviceps purpurea
    Birgitt Oeser
    Institut fur Botanik, Westf Wilhelms Universität Münster, Schlossgarten 3, D 48149 Munster, Germany
    Mol Plant Pathol 10:665-84. 2009
    ..In summary, the analysis of axenic and in planta ESTs yielded a collection of candidate genes to be evaluated for functional roles in this plant-microbe interaction...
  9. doi request reprint DoMosaics: software for domain arrangement visualization and domain-centric analysis of proteins
    Andrew D Moore
    Institute for Evolution and Biodiversity, Hüfferstrasse 1, Westphalian Wilhelms University Münster, 48147 Münster, Germany, and Max Planck Institute for Infection Biology, Chariteplatz 1, 10117 Berlin, Germany
    Bioinformatics 30:282-3. 2014
    ..Availability and implementation: DoMosaics is licensed under the Apache License, Version 2.0, and binaries can be freely obtained from www.domosaics.net...
  10. pmc Comparative analysis of expressed sequence tag (EST) libraries in the seagrass Zostera marina subjected to temperature stress
    Thorsten B H Reusch
    Institute for Evolution and Biodiversity, Plant Evolutionary Ecology, University of Munster, Munster, Germany
    Mar Biotechnol (NY) 10:297-309. 2008
    ..A total of 210 TUGs contain one or more microsatellites as potential candidates for gene-linked genetic markers. Data are publicly available in a user-friendly database at http://www.uni-muenster.de/Evolution/ebb/Services/zostera ...
  11. ncbi request reprint Phylogenetic profiling of protein interaction networks in eukaryotic transcription factors reveals focal proteins being ancestral to hubs
    Gregory D Amoutzias
    Bioinformatics Group, School of Biological Sciences, Biology Department, University of Munster, Scholossplatz 4 D 48149, Germany
    Gene 347:247-53. 2005
    ..However, the overall scaling behaviour does not always precisely confer to some theoretical models on network evolution. In conclusion, new models which reflect the biological details of molecular evolution, need to be developed...
  12. doi request reprint Specificity of the innate immune system and diversity of C-type lectin domain (CTLD) proteins in the nematode Caenorhabditis elegans
    Hinrich Schulenburg
    Department of Animal Evolutionary Ecology, Zoological Institute, University of Tuebingen, Auf der Morgenstelle 28, 72076 Tuebingen, Germany
    Immunobiology 213:237-50. 2008
    ..Taken together, our evaluation reveals high potential for immune specificity in C. elegans that may enhance the nematode's ability to fight off pathogens...
  13. ncbi request reprint A putative transcription factor inducing mobility in Mycoplasma pneumoniae
    Erich Bornberg-Bauer
    Microbiology 148:3764-5. 2002