D Zink

Summary

Affiliation: University of Munich
Country: Germany

Publications

  1. ncbi Intranuclear changes in cancer cells
    David M Gilbert
    Department of Biological Science, Florida State University, Tallahassee, FL 32306, USA
    Genome Biol 8:312. 2007
  2. ncbi Transcription-dependent spatial arrangements of CFTR and adjacent genes in human cell nuclei
    Daniele Zink
    Ludwig Maximilians University Munich, Department of Biology II, 80336 Munich, Germany
    J Cell Biol 166:815-25. 2004
  3. ncbi Nuclear structure in cancer cells
    Daniele Zink
    University of Munich LMU, Department of Biology II, Goethestr 31, 80336 Munich, Germany
    Nat Rev Cancer 4:677-87. 2004
  4. ncbi Organization of early and late replicating DNA in human chromosome territories
    D Zink
    Institut für Anthropologie und Humangenetik, LMU Munchen, Goethestrasse 31, Munchen, D 80336, Germany
    Exp Cell Res 247:176-88. 1999
  5. ncbi Visualizing chromatin and chromosomes in living cells
    Daniele Zink
    Department Biologie 2, Universität München LMU, Goethestrasse 31, 80336, Munich, Germany
    Methods 29:42-50. 2003
  6. ncbi Live-cell microscopy of single nuclear chromosomes and genome compartments: evaluation of labeling procedure and imaging conditions
    C Fauth
    LMU Munchen, Institut für Anthropologie und Humangenetik, Munchen, Germany
    Cytometry 45:214-24. 2001
  7. ncbi The temporal program of DNA replication: new insights into old questions
    Daniele Zink
    Department Biologie II, Ludwig Maximilians Universitat Munchen, Biozentrum, Planegg Martinsried, Germany
    Chromosoma 115:273-87. 2006
  8. ncbi Large-scale chromatin fibers of living cells display a discontinuous functional organization
    N Sadoni
    , , Munich, Germany
    Chromosoma 110:39-51. 2001
  9. ncbi Transcription-dependent spatial arrangements of CFTR and conserved adjacent loci are not conserved in human and murine nuclei
    Nicolas Sadoni
    Department of Biology II, Ludwig Maximilians University Munich, Biocenter, Planegg Martinsried, Germany
    Chromosoma 117:381-97. 2008
  10. ncbi Targeted deficiency of the transcriptional activator Hnf1alpha alters subnuclear positioning of its genomic targets
    Reini F Luco
    Genomic Programming of Beta Cells Laboratory, Institut d Investigacions August Pi i Sunyer, Barcelona, Spain
    PLoS Genet 4:e1000079. 2008

Collaborators

  • David M Gilbert
  • Carsten Rudolph
  • A Visser
  • Dirk Schindelhauer
  • Margarida D Amaral
  • Fabio Spada
  • Nathalie Beaujean
  • A H Fischer
  • Nicolas Sadoni
  • Catherine Martin
  • Andreas Englmann
  • Jeannette Koch
  • Reini F Luco
  • Elena Fedorova
  • Pascale Debey
  • Vincent Brochard
  • Christoph Mayr
  • N Sadoni
  • C Fauth
  • Elisabeth Kremmer
  • Dirk Eick
  • Bianca Sabrina Targosz
  • Renato Paro
  • Jorge Ferrer
  • Miguel A Maestro
  • Ina K Dahlsveen
  • Bianca-Sabrina Targosz
  • Stephanie Fesser
  • Christophe Audouard
  • Susanne Christan
  • Luka A Clarke
  • Ernst H K Stelzer
  • M Cristina Cardoso
  • Heinrich Leonhardt
  • Armin Meister
  • Ingo Schubert
  • Zuzana Jasencakova
  • K F Sullivan
  • P Weinzierl
  • E H Stelzer

Detail Information

Publications19

  1. ncbi Intranuclear changes in cancer cells
    David M Gilbert
    Department of Biological Science, Florida State University, Tallahassee, FL 32306, USA
    Genome Biol 8:312. 2007
  2. ncbi Transcription-dependent spatial arrangements of CFTR and adjacent genes in human cell nuclei
    Daniele Zink
    Ludwig Maximilians University Munich, Department of Biology II, 80336 Munich, Germany
    J Cell Biol 166:815-25. 2004
    ..Together, the results show that small chromosomal subregions can display highly flexible nuclear organizations that are regulated at the level of individual genes in a transcription-dependent manner...
  3. ncbi Nuclear structure in cancer cells
    Daniele Zink
    University of Munich LMU, Department of Biology II, Goethestr 31, 80336 Munich, Germany
    Nat Rev Cancer 4:677-87. 2004
    ..Advances in understanding nuclear structure have revealed insights into the process of malignant transformation and provide a basis for the development of new diagnostic tools and therapeutics...
  4. ncbi Organization of early and late replicating DNA in human chromosome territories
    D Zink
    Institut für Anthropologie und Humangenetik, LMU Munchen, Goethestrasse 31, Munchen, D 80336, Germany
    Exp Cell Res 247:176-88. 1999
    ..These findings are compatible with the hypothesis that DNA organized into replicon clusters remains stably aggregated in non-S-phase cells...
  5. ncbi Visualizing chromatin and chromosomes in living cells
    Daniele Zink
    Department Biologie 2, Universität München LMU, Goethestrasse 31, 80336, Munich, Germany
    Methods 29:42-50. 2003
    ..Appropriate labeling procedures as well as cell chamber systems and important controls for live cell microscopy are described...
  6. ncbi Live-cell microscopy of single nuclear chromosomes and genome compartments: evaluation of labeling procedure and imaging conditions
    C Fauth
    LMU Munchen, Institut für Anthropologie und Humangenetik, Munchen, Germany
    Cytometry 45:214-24. 2001
    ..J Cell Biol 146:1211-1226, 1999). We characterized the potential artificial impact of this approach on chromosome structure and dynamics. We also evaluated potential sources of artifacts in corresponding live-cell imaging...
  7. ncbi The temporal program of DNA replication: new insights into old questions
    Daniele Zink
    Department Biologie II, Ludwig Maximilians Universitat Munchen, Biozentrum, Planegg Martinsried, Germany
    Chromosoma 115:273-87. 2006
    ..These clear predictions, and the fact that the tools are at hand now to further test them, open an avenue towards solving the long standing problem on how replication timing is determined in metazoan cells...
  8. ncbi Large-scale chromatin fibers of living cells display a discontinuous functional organization
    N Sadoni
    , , Munich, Germany
    Chromosoma 110:39-51. 2001
    ..In particular, Cy3-labeled foci appeared as discontinuous regions of large-scale fibers. These results demonstrate that large-scale chromatin fibers have discontinuous functional characteristics...
  9. ncbi Transcription-dependent spatial arrangements of CFTR and conserved adjacent loci are not conserved in human and murine nuclei
    Nicolas Sadoni
    Department of Biology II, Ludwig Maximilians University Munich, Biocenter, Planegg Martinsried, Germany
    Chromosoma 117:381-97. 2008
    ..Furthermore, the results suggest that the way how nuclear positioning contributes to the regulation of conserved loci can be different in different vertebrate species...
  10. ncbi Targeted deficiency of the transcriptional activator Hnf1alpha alters subnuclear positioning of its genomic targets
    Reini F Luco
    Genomic Programming of Beta Cells Laboratory, Institut d Investigacions August Pi i Sunyer, Barcelona, Spain
    PLoS Genet 4:e1000079. 2008
    ..We have also revealed a defect in subnuclear gene positioning in a model of a human transcription factor disease...
  11. ncbi Conserved patterns of nuclear compartmentalization are not observed in the chordate Oikopleura
    Fabio Spada
    Sars Centre for Marine Molecular Biology, Bergen High Technology Centre, University of Bergen, Thormøhlensgt 55, Bergen, Norway
    Biol Cell 99:273-87. 2007
    ..Recent results from a limited number of eukaryotic model organisms suggest that major principles governing spatial organization of the genome in functionally distinct nuclear compartments are conserved through evolution...
  12. ncbi Architectural reorganization of the nuclei upon transfer into oocytes accompanies genome reprogramming
    Catherine Martin
    , Institut National de Recherche Agronomique, Domaine de Vilvert, Jouy-en-Josas, France
    Mol Reprod Dev 73:1102-11. 2006
    ..We could also establish that the adequate distribution of chromosomal territories at the pronuclear stage seems important for the development until blastocyst...
  13. ncbi Genome restructuring in mouse embryos during reprogramming and early development
    Catherine Martin
    , Institut National de la Recherche Agronomique, Domaine de Vilvert, 78352 Jouy-en-Josas Cedex, France
    Dev Biol 292:317-32. 2006
    ....
  14. ncbi The replication timing of CFTR and adjacent genes
    Andreas Englmann
    Ludwig Maximilians University Munich, Department of Biology II, Grosshaderner Str. 2, 82152, Planegg-Martinsried, Germany
    Chromosome Res 13:183-94. 2005
    ..Furthermore, the results imply a specific functional order of nuclear changes related to switches in replication timing...
  15. ncbi Stable chromosomal units determine the spatial and temporal organization of DNA replication
    Nicolas Sadoni
    University of Munich (LMU, Department Biology II, Grosshaderner Str. 2, 82152 Planegg-Martinsried, Germany
    J Cell Sci 117:5353-65. 2004
    ..These findings imply that the specific nuclear substructure of chromosomes and the order of their stable subunits determine the spatiotemporal organization of DNA replication...
  16. ncbi Nascent RNA synthesis in the context of chromatin architecture
    Nicolas Sadoni
    , Department Biologie II, Goethestr. 31, , Germany
    Chromosome Res 12:439-51. 2004
    ..However, the results are in agreement with the emerging view that even condensed chromatin domains display a highly dynamic organization and are not a physical barrier for transcription factors...
  17. ncbi Comparative analysis of the functional genome architecture of animal and plant cell nuclei
    Christoph Mayr
    University of Munich (LMU, Department Biology II, Goethestr. 31, 80336 Munich, Germany
    Chromosome Res 11:471-84. 2003
    ..There are, however, differences between animals and plants with regard to histone acetylation patterns and the nuclear distribution of late-replicating chromatin...
  18. ncbi The nuclear organization of Polycomb/Trithorax group response elements in larval tissues of Drosophila melanogaster
    Elena Fedorova
    Department Biologie II, Ludwig Maximilians Universitat Munchen, Grosshaderner Str 2, 82152, Planegg Martinsried, Germany
    Chromosome Res 16:649-73. 2008
    ....
  19. ncbi Association of p53 and MSH2 with recombinative repair complexes during S phase
    Daniele Zink
    Institut für Anthropologie und Humangenetik LMU München, Goethestr 31, 80336 Munchen, Germany
    Oncogene 21:4788-800. 2002
    ..Our data suggest that p53 is linked similarly to homologous recombination as MSH2 and provide further evidence for the new concept of a dual role of p53 in the regulation of growth and repair...