B Marin

Summary

Affiliation: University of Cologne
Country: Germany

Publications

  1. ncbi request reprint Mesostigmatophyceae, a new class of streptophyte green algae revealed by SSU rRNA sequence comparisons
    B Marin
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Germany
    Protist 150:399-417. 1999
  2. doi request reprint Molecular phylogeny and classification of the Mamiellophyceae class. nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastid-encoded rRNA operons
    Birger Marin
    Biowissenschaftliches Zentrum, Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Otto Fischer Str 6, 50674 Koln, Germany
    Protist 161:304-36. 2010
  3. doi request reprint Nested in the Chlorellales or independent class? Phylogeny and classification of the Pedinophyceae (Viridiplantae) revealed by molecular phylogenetic analyses of complete nuclear and plastid-encoded rRNA operons
    Birger Marin
    Biozentrum Köln, Botanisches Institut, Universitat zu Koln, Zülpicher Str 47b, 50674 Koln, Germany
    Protist 163:778-805. 2012
  4. pmc Loss of the insulator protein CTCF during nematode evolution
    Peter Heger
    Zoological Institute, University of Cologne, Kerpener Strasse 15, 50937 Koln, Germany
    BMC Mol Biol 10:84. 2009
  5. pmc A close-up view on ITS2 evolution and speciation - a case study in the Ulvophyceae (Chlorophyta, Viridiplantae)
    Lenka Caisová
    Universitat zu Koln, Biozentrum Köln, Botanisches Institut, Zülpicher Str 47b, 50674 Koln, Germany
    BMC Evol Biol 11:262. 2011
  6. pmc The ancestor of the Paulinella chromatophore obtained a carboxysomal operon by horizontal gene transfer from a Nitrococcus-like gamma-proteobacterium
    Birger Marin
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Koln, Germany
    BMC Evol Biol 7:85. 2007
  7. ncbi request reprint A plastid in the making: evidence for a second primary endosymbiosis
    Birger Marin
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Gyrhofstrasse 15, 50931 Koln, Germany
    Protist 156:425-32. 2005
  8. ncbi request reprint Phylogeny and taxonomic revision of plastid-containing euglenophytes based on SSU rDNA sequence comparisons and synapomorphic signatures in the SSU rRNA secondary structure
    Birger Marin
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Gyrhofstr 15, D 50931 Köln, Germany
    Protist 154:99-145. 2003
  9. ncbi request reprint Are combined analyses better than single gene phylogenies? A case study using SSU rDNA and rbcL sequence comparisons in the Zygnematophyceae (Streptophyta)
    Andrey A Gontcharov
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Koln, Germany
    Mol Biol Evol 21:612-24. 2004
  10. ncbi request reprint Nuclear and nucleomorph SSU rDNA phylogeny in the Cryptophyta and the evolution of cryptophyte diversity
    Kerstin Hoef-Emden
    Botanisches Institut, Universitat zu Koln, Lehrstuhl I, Gyrhofstrasse 15, 50931 Koln, Germany
    J Mol Evol 55:161-79. 2002

Collaborators

Detail Information

Publications13

  1. ncbi request reprint Mesostigmatophyceae, a new class of streptophyte green algae revealed by SSU rRNA sequence comparisons
    B Marin
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Germany
    Protist 150:399-417. 1999
    ....
  2. doi request reprint Molecular phylogeny and classification of the Mamiellophyceae class. nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastid-encoded rRNA operons
    Birger Marin
    Biowissenschaftliches Zentrum, Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Otto Fischer Str 6, 50674 Koln, Germany
    Protist 161:304-36. 2010
    ..The Mamiellophyceae represent one of the ecologically most successful groups of eukaryotic, photosynthetic picoplankters in marine and likely also freshwater environments...
  3. doi request reprint Nested in the Chlorellales or independent class? Phylogeny and classification of the Pedinophyceae (Viridiplantae) revealed by molecular phylogenetic analyses of complete nuclear and plastid-encoded rRNA operons
    Birger Marin
    Biozentrum Köln, Botanisches Institut, Universitat zu Koln, Zülpicher Str 47b, 50674 Koln, Germany
    Protist 163:778-805. 2012
    ..The latter approach revealed conserved habitat preferences for the Marsupiomonadales and Pedinomonadales, and identified several novel pedinophyte lineages...
  4. pmc Loss of the insulator protein CTCF during nematode evolution
    Peter Heger
    Zoological Institute, University of Cologne, Kerpener Strasse 15, 50937 Koln, Germany
    BMC Mol Biol 10:84. 2009
    ..We therefore searched in nematodes for orthologs of proteins that are involved in chromatin insulation...
  5. pmc A close-up view on ITS2 evolution and speciation - a case study in the Ulvophyceae (Chlorophyta, Viridiplantae)
    Lenka Caisová
    Universitat zu Koln, Biozentrum Köln, Botanisches Institut, Zülpicher Str 47b, 50674 Koln, Germany
    BMC Evol Biol 11:262. 2011
    ....
  6. pmc The ancestor of the Paulinella chromatophore obtained a carboxysomal operon by horizontal gene transfer from a Nitrococcus-like gamma-proteobacterium
    Birger Marin
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Koln, Germany
    BMC Evol Biol 7:85. 2007
    ..In rDNA-phylogenies, the Paulinella chromatophore diverged basal to the PS-clade, raising the question whether the HGT occurred before or after the split of the chromatophore ancestor...
  7. ncbi request reprint A plastid in the making: evidence for a second primary endosymbiosis
    Birger Marin
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Gyrhofstrasse 15, 50931 Koln, Germany
    Protist 156:425-32. 2005
    ....
  8. ncbi request reprint Phylogeny and taxonomic revision of plastid-containing euglenophytes based on SSU rDNA sequence comparisons and synapomorphic signatures in the SSU rRNA secondary structure
    Birger Marin
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Gyrhofstr 15, D 50931 Köln, Germany
    Protist 154:99-145. 2003
    ..The sister clade of Phacus s. str. (mixed Euglena/Lepocinclis-clade) was identified as Lepocinclis Perty (emended)...
  9. ncbi request reprint Are combined analyses better than single gene phylogenies? A case study using SSU rDNA and rbcL sequence comparisons in the Zygnematophyceae (Streptophyta)
    Andrey A Gontcharov
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Koln, Germany
    Mol Biol Evol 21:612-24. 2004
    ..Long-branch taxa were not the same for the two genes analyzed, and, thus, their effect on phylogenetic resolution was minimized in the combined analyses...
  10. ncbi request reprint Nuclear and nucleomorph SSU rDNA phylogeny in the Cryptophyta and the evolution of cryptophyte diversity
    Kerstin Hoef-Emden
    Botanisches Institut, Universitat zu Koln, Lehrstuhl I, Gyrhofstrasse 15, 50931 Koln, Germany
    J Mol Evol 55:161-79. 2002
    ....
  11. ncbi request reprint Molecular phylogeny and taxonomic revision of Chlamydomonas (Chlorophyta). I. Emendation of Chlamydomonas Ehrenberg and Chloromonas Gobi, and description of Oogamochlamys gen. nov. and Lobochlamys gen. nov
    T Pröschold
    Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Germany
    Protist 152:265-300. 2001
    ....
  12. pmc Streptophyte algae and the origin of embryophytes
    Burkhard Becker
    Botanisches Institut, Universitat zu Koln, Gyrhofstrasse 16, Koln, Germany
    Ann Bot 103:999-1004. 2009
    ..The complete genomes of a few key streptophyte algae taxa will be required for a better understanding of the colonization of terrestrial habitats by streptophytes...
  13. ncbi request reprint Origin and fate of chloroplasts in the Euglenoida
    Birger Marin
    Protist 155:13-4. 2004