Nora C Toussaint

Summary

Country: Germany

Publications

  1. pmc Exploiting physico-chemical properties in string kernels
    Nora C Toussaint
    Center for Bioinformatics, Eberhard Karls Universitat, Sand 14, 72076 Tubingen, Germany
    BMC Bioinformatics 11:S7. 2010
  2. doi request reprint Universal peptide vaccines - optimal peptide vaccine design based on viral sequence conservation
    Nora C Toussaint
    Center for Bioinformatics, University of Tubingen, Tubingen, Germany
    Vaccine 29:8745-53. 2011
  3. pmc Inferring latent task structure for Multitask Learning by Multiple Kernel Learning
    Christian Widmer
    Friedrich Miescher Laboratory, Max Planck Society, Spemannstr, 39, 72076 Tubingen, Germany
    BMC Bioinformatics 11:S5. 2010
  4. pmc OptiTope--a web server for the selection of an optimal set of peptides for epitope-based vaccines
    Nora C Toussaint
    Division for Simulation of Biological Systems, Wilhelm Schickard Institute for Computer Science, Center for Bioinformatics Tubingen, Eberhard Karls Universitat Tubingen, Germany
    Nucleic Acids Res 37:W617-22. 2009
  5. pmc Binding pocket optimization by computational protein design
    Christoph Malisi
    Max Planck Institute for Developmental Biology, Tubingen, Germany
    PLoS ONE 7:e52505. 2012
  6. pmc A mathematical framework for the selection of an optimal set of peptides for epitope-based vaccines
    Nora C Toussaint
    Simulation of Biological Systems, Center for Bioinformatics, Eberhard Karls University Tubingen, Tubingen, Germany
    PLoS Comput Biol 4:e1000246. 2008

Detail Information

Publications6

  1. pmc Exploiting physico-chemical properties in string kernels
    Nora C Toussaint
    Center for Bioinformatics, Eberhard Karls Universitat, Sand 14, 72076 Tubingen, Germany
    BMC Bioinformatics 11:S7. 2010
    ..This information is very valuable, especially when training data is less abundant. There have been only very few approaches so far that aim at combining these two ideas...
  2. doi request reprint Universal peptide vaccines - optimal peptide vaccine design based on viral sequence conservation
    Nora C Toussaint
    Center for Bioinformatics, University of Tubingen, Tubingen, Germany
    Vaccine 29:8745-53. 2011
    ..The proposed methodology can be applied to any virus to assess the feasibility of optimally combining the above-mentioned constraints...
  3. pmc Inferring latent task structure for Multitask Learning by Multiple Kernel Learning
    Christian Widmer
    Friedrich Miescher Laboratory, Max Planck Society, Spemannstr, 39, 72076 Tubingen, Germany
    BMC Bioinformatics 11:S5. 2010
    ..This is done by formulating the Multitask Learning problem as Multiple Kernel Learning, using the recently published q-Norm MKL algorithm...
  4. pmc OptiTope--a web server for the selection of an optimal set of peptides for epitope-based vaccines
    Nora C Toussaint
    Division for Simulation of Biological Systems, Wilhelm Schickard Institute for Computer Science, Center for Bioinformatics Tubingen, Eberhard Karls Universitat Tubingen, Germany
    Nucleic Acids Res 37:W617-22. 2009
    ..g. a certain ethnic group). OptiTope is available at http://www.epitoolkit.org/optitope...
  5. pmc Binding pocket optimization by computational protein design
    Christoph Malisi
    Max Planck Institute for Developmental Biology, Tubingen, Germany
    PLoS ONE 7:e52505. 2012
    ....
  6. pmc A mathematical framework for the selection of an optimal set of peptides for epitope-based vaccines
    Nora C Toussaint
    Simulation of Biological Systems, Center for Bioinformatics, Eberhard Karls University Tubingen, Tubingen, Germany
    PLoS Comput Biol 4:e1000246. 2008
    ..An implementation of the algorithm outperforms a simple greedy strategy as well as a previously suggested evolutionary algorithm and has runtimes on the order of seconds for typical problem sizes...