Wim J J Soppe

Summary

Country: Germany

Publications

  1. pmc Identification of the Arabidopsis REDUCED DORMANCY 2 gene uncovers a role for the polymerase associated factor 1 complex in seed dormancy
    Yongxiu Liu
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, Cologne, Germany
    PLoS ONE 6:e22241. 2011
  2. pmc Seed maturation in Arabidopsis thaliana is characterized by nuclear size reduction and increased chromatin condensation
    Martijn van Zanten
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Proc Natl Acad Sci U S A 108:20219-24. 2011
  3. ncbi Chromatin dynamics during seed dormancy
    Yongxiu Liu
    Max Planck Institute for Plant Breeding Research, Cologne, Germany
    Methods Mol Biol 773:239-57. 2011
  4. pmc Control and consequences of chromatin compaction during seed maturation in Arabidopsis thaliana
    Martijn van Zanten
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, Cologne, Germany
    Plant Signal Behav 7:338-41. 2012
  5. pmc The conserved splicing factor SUA controls alternative splicing of the developmental regulator ABI3 in Arabidopsis
    Matteo Sugliani
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Plant Cell 22:1936-46. 2010
  6. pmc The time required for dormancy release in Arabidopsis is determined by DELAY OF GERMINATION1 protein levels in freshly harvested seeds
    Kazumi Nakabayashi
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Plant Cell 24:2826-38. 2012
  7. ncbi Natural modifiers of seed longevity in the Arabidopsis mutants abscisic acid insensitive3-5 (abi3-5) and leafy cotyledon1-3 (lec1-3)
    Matteo Sugliani
    Max Planck Institute for Plant Breeding Research, Cologne, Germany
    New Phytol 184:898-908. 2009
  8. ncbi HISTONE DEACETYLASE 9 represses seedling traits in Arabidopsis thaliana dry seeds
    Martijn van Zanten
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, 50829, Cologne, Germany Molecular Plant Physiology, Institute of Environmental Biology, Utrecht University, Padulaan 8, 3584 CH, Utrecht, The Netherlands
    Plant J 80:475-88. 2014
  9. ncbi REDUCED DORMANCY5 Encodes a Protein Phosphatase 2C That Is Required for Seed Dormancy in Arabidopsis
    Yong Xiang
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Plant Cell 26:4362-75. 2014
  10. pmc The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy
    Yongxiu Liu
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Plant Cell 19:433-44. 2007

Collaborators

Detail Information

Publications10

  1. pmc Identification of the Arabidopsis REDUCED DORMANCY 2 gene uncovers a role for the polymerase associated factor 1 complex in seed dormancy
    Yongxiu Liu
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, Cologne, Germany
    PLoS ONE 6:e22241. 2011
    ..Since mutants in PAF1C related factors are also described to be early flowering, we conclude that these components are involved in the regulation of both major developmental transitions in the plant...
  2. pmc Seed maturation in Arabidopsis thaliana is characterized by nuclear size reduction and increased chromatin condensation
    Martijn van Zanten
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Proc Natl Acad Sci U S A 108:20219-24. 2011
    ..We conclude that the changes in nuclear size and chromatin condensation in seeds are independent, developmentally controlled processes...
  3. ncbi Chromatin dynamics during seed dormancy
    Yongxiu Liu
    Max Planck Institute for Plant Breeding Research, Cologne, Germany
    Methods Mol Biol 773:239-57. 2011
    ..Changes in DNA methylation and histone modifications can be studied with molecular methods, like bisulfite sequencing, immunoblotting, and chromatin immunoprecipitation...
  4. pmc Control and consequences of chromatin compaction during seed maturation in Arabidopsis thaliana
    Martijn van Zanten
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, Cologne, Germany
    Plant Signal Behav 7:338-41. 2012
    ....
  5. pmc The conserved splicing factor SUA controls alternative splicing of the developmental regulator ABI3 in Arabidopsis
    Matteo Sugliani
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Plant Cell 22:1936-46. 2010
    ..In the abi3-5 mutant, ABI3-beta codes for a functional ABI3 protein due to frameshift restoration...
  6. pmc The time required for dormancy release in Arabidopsis is determined by DELAY OF GERMINATION1 protein levels in freshly harvested seeds
    Kazumi Nakabayashi
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Plant Cell 24:2826-38. 2012
    ..We propose that DOG1 protein abundance in freshly harvested seeds acts as a timer for seed dormancy release, which functions largely independent from ABA...
  7. ncbi Natural modifiers of seed longevity in the Arabidopsis mutants abscisic acid insensitive3-5 (abi3-5) and leafy cotyledon1-3 (lec1-3)
    Matteo Sugliani
    Max Planck Institute for Plant Breeding Research, Cologne, Germany
    New Phytol 184:898-908. 2009
    ..The isolation and characterization of natural modifiers of the seed maturation mutants abi3-5 and lec1-3, and the analysis of their seed proteomes, advance our current understanding of seed longevity...
  8. ncbi HISTONE DEACETYLASE 9 represses seedling traits in Arabidopsis thaliana dry seeds
    Martijn van Zanten
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, 50829, Cologne, Germany Molecular Plant Physiology, Institute of Environmental Biology, Utrecht University, Padulaan 8, 3584 CH, Utrecht, The Netherlands
    Plant J 80:475-88. 2014
    ..The proposed function of HDA9 is opposite to that of its homologous genes HDA6 and HDA19, which have been reported to repress embryonic properties in germinated seedlings. ..
  9. ncbi REDUCED DORMANCY5 Encodes a Protein Phosphatase 2C That Is Required for Seed Dormancy in Arabidopsis
    Yong Xiang
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Plant Cell 26:4362-75. 2014
    ..Interestingly, reduction of APUM transcripts by RNA interference complemented the reduced dormancy phenotype of rdo5, indicating that RDO5 functions by suppressing APUM transcript levels. ..
  10. pmc The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy
    Yongxiu Liu
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Plant Cell 19:433-44. 2007
    ..The hub1 mutant showed altered expression levels for several dormancy-related genes. We propose a role for chromatin remodeling in seed dormancy by H2B monoubiquitination through HUB1 and HUB2...