Affiliation: Max Planck Institute for Molecular Genetics
- Elucidating regulatory mechanisms downstream of a signaling pathway using informative experimentsEwa Szczurek
Computational Molecular Biology Department, Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany
Mol Syst Biol 5:287. 2009..In comparison with other approaches, MEED suggested the most informative experiments for unambiguous identification of transcriptional regulation in this system...
- Introducing knowledge into differential expression analysisEwa Szczurek
Max Planck Institute for Molecular Genetics, Berlin, Germany
J Comput Biol 17:953-67. 2010..Finally, we utilize literature knowledge to improve clustering of time-course expression profiles...
- Deregulation upon DNA damage revealed by joint analysis of context-specific perturbation dataEwa Szczurek
Computational Molecular Biology Department, Max Planck Institute for Molecular Genetics, Ihnestrasse 73, 14195 Berlin, Germany
BMC Bioinformatics 12:249. 2011..Accumulating knowledge about biological networks creates an opportunity to study these changes in their cellular context...