Erhard Rahm

Summary

Affiliation: Max Planck Institute for Evolutionary Anthropology
Country: Germany

Publications

  1. pmc The bonobo genome compared with the chimpanzee and human genomes
    Kay Prüfer
    Max Planck Institute for Evolutionary Anthropology, D 04103 Leipzig, Germany
    Nature 486:527-31. 2012
  2. pmc BOWiki: an ontology-based wiki for annotation of data and integration of knowledge in biology
    Robert Hoehndorf
    Department of Computer Science, Faculty of Mathematics and Computer Science, University of Leipzig, Johannisgasse 26, 04103 Leipzig, Germany
    BMC Bioinformatics 10:S5. 2009
  3. pmc FUNC: a package for detecting significant associations between gene sets and ontological annotations
    Kay Prüfer
    Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, D 04103 Leipzig, Germany
    BMC Bioinformatics 8:41. 2007
  4. pmc PatMaN: rapid alignment of short sequences to large databases
    Kay Prüfer
    Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany
    Bioinformatics 24:1530-1. 2008
  5. pmc Computational challenges in the analysis of ancient DNA
    Kay Prüfer
    Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany
    Genome Biol 11:R47. 2010
  6. doi request reprint Impact of ontology evolution on functional analyses
    Anika Groß
    Department of Computer Science, University of Leipzig, Leipzig, Germany
    Bioinformatics 28:2671-7. 2012

Collaborators

Detail Information

Publications6

  1. pmc The bonobo genome compared with the chimpanzee and human genomes
    Kay Prüfer
    Max Planck Institute for Evolutionary Anthropology, D 04103 Leipzig, Germany
    Nature 486:527-31. 2012
    ..In addition, many of the regions that overlap genes may eventually help us understand the genetic basis of phenotypes that humans share with one of the two apes to the exclusion of the other...
  2. pmc BOWiki: an ontology-based wiki for annotation of data and integration of knowledge in biology
    Robert Hoehndorf
    Department of Computer Science, Faculty of Mathematics and Computer Science, University of Leipzig, Johannisgasse 26, 04103 Leipzig, Germany
    BMC Bioinformatics 10:S5. 2009
    ..The combination of a collaborative web-based platform with logic-based approaches and Semantic Web technology can be used to address some of these challenges and concerns...
  3. pmc FUNC: a package for detecting significant associations between gene sets and ontological annotations
    Kay Prüfer
    Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, D 04103 Leipzig, Germany
    BMC Bioinformatics 8:41. 2007
    ..However, it is often difficult to assess the statistical significance of such analyses since many inter-dependent categories are tested simultaneously...
  4. pmc PatMaN: rapid alignment of short sequences to large databases
    Kay Prüfer
    Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany
    Bioinformatics 24:1530-1. 2008
    ..Both queries with and without ambiguity codes can be searched. Search time is short for perfect matches, and retrieval time rises exponentially with the number of edits allowed...
  5. pmc Computational challenges in the analysis of ancient DNA
    Kay Prüfer
    Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany
    Genome Biol 11:R47. 2010
    ..We show that more accurate genome divergence estimates from ancient DNA sequence can be attained using at least two outgroup genomes and appropriate filtering...
  6. doi request reprint Impact of ontology evolution on functional analyses
    Anika Groß
    Department of Computer Science, University of Leipzig, Leipzig, Germany
    Bioinformatics 28:2671-7. 2012
    ..The analysis is based on new measures for the stability of result sets and considers different ontology and annotation changes...