Research Topics
| Gernot GlocknerSummaryAffiliation: Institute of Molecular Biotechnology Country: Germany Publications
| Collaborators
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Detail Information
Publications
EST analysis of the scaly green flagellate Mesostigma viride (Streptophyta): implications for the evolution of green plants (Viridiplantae)Andreas Simon
Botanical Institute, University of Cologne, Gyrhofstr 15, 50931 Cologne, Germany
BMC Plant Biol 6:2. 2006....- Identification and phylogenetic analysis of Dictyostelium discoideum kinesin proteinsMartin Kollmar
Abteilung NMR basierte Strukturbiologie, Max Planck Institut fur biophysikalische Chemie, Am Fabetaberg 11, D 37077 Gottingen, Germany
BMC Genomics 4:47. 2003..Subsequent studies revealed and classified the full set of members of the kinesin superfamily expressed by these organisms. For Dictyostelium discoideum, only five kinesin superfamily proteins (Kif's) have already been reported... 
The complex repeats of Dictyostelium discoideumG Glockner
IMB Jena, Department of Genome Analysis, D 07745 Jena, Germany
Genome Res 11:585-94. 2001..All elements show insertion preference into loci in which other elements of the same family reside. The analysis of the complex repeats is a valuable data resource for the ongoing assembly of whole D. discoideum chromosomes...
DictyMOLD-a Dictyostelium discoideum genome browser databaseMarius Felder
IMB Jena, Department of Genome Analysis Beutenbergstrasse 11, 07745 Jena, Germany
Bioinformatics 21:696-7. 2005..AVAILABILITY: The DictyMOLD database is freely accessible via http://genome.imb-jena.de/dictyostelium/ CONTACT: ...- Comparative analysis of the Borrelia garinii genomeG Glockner
Genome Analysis, Institute for Molecular Biotechnology, Beutenbergstr 11, 07745 Jena, Germany
Nucleic Acids Res 32:6038-46. 2004..garinii genome. Thus, phenotypic differences between the two species could be attributable to the presence or absence of these two plasmids as well as to the potentially positively selected genes... - Sequence and analysis of chromosome 2 of Dictyostelium discoideumGernot Glockner
IMB Jena, Department of Genome Analysis, Beutenbergstr 11, 07745 Jena, Germany
Nature 418:79-85. 2002..This analysis strengthens the view that the evolutionary position of D. discoideum is located before the branching of metazoa and fungi but after the divergence of the plant kingdom, placing it close to the base of metazoan evolution... - Comparative genome analysis: selection pressure on the Borrelia vls cassettes is essential for infectivityGernot Glockner
Genome Analysis Group, Leibniz Institute for Age Research Fritz Lipmann Institute, Beutenbergstr, 11, 07745 Jena, Germany
BMC Genomics 7:211. 2006.... - GenColors: accelerated comparative analysis and annotation of prokaryotic genomes at various stages of completenessAlessandro Romualdi
Biocomputing Group, Institute of Molecular Biotechnology, 07745 Jena, Germany
Bioinformatics 21:3669-71. 2005..imb-jena.de. Online usage of GenColors-based genome browsers is the preferred application mode. The system is also available upon request for local installation... - Phylogeny-wide analysis of social amoeba genomes highlights ancient origins for complex intercellular communicationAndrew J Heidel
Leibniz Institute for Age Research Fritz Lipmann Institute, D 07745 Jena, Germany
Genome Res 21:1882-91. 2011..Phylogenetic dating using a concatenated data set and extensive loss of synteny indicate that DF, PP, and DD split from their last common ancestor at least 0.6 billion years ago... - Centromere sequence and dynamics in Dictyostelium discoideumGernot Glockner
Leibniz Institute for Age Research Fritz Lipmann Institute, Beutenbergstrasse 11, D 07745 Jena, Germany
Nucleic Acids Res 37:1809-16. 2009..In addition to insights into the centromere organization and dynamics of a protist eukaryote, this work also provides a starting point for the analysis of the evolution of centromere structures in social amoebas by comparative genomics... - Identification and characterization of a new conjugation/type IVA secretion system (trb/tra) of Legionella pneumophila Corby localized on two mobile genomic islandsGernot Glockner
Leibniz Institute for Age Research Fritz Lipmann Institute, D 07745 Jena, Germany
Int J Med Microbiol 298:411-28. 2008..Thus, we describe for the first time a mechanism that may explain the observed horizontal transfer of chromosomal DNA in Legionella... - Gene organization features in A/T-rich organismsKarol Szafranski
Department of Genome Analysis, Institute for Molecular Biotechnology Jena, Beutenbergstr. 11, D-07745 Jena, Germany
J Mol Evol 60:90-8. 2005..Instead both the shift of the nucleotide usage in coding regions to A/T-rich codons and the longer intergenic regions make an equal contribution to the higher A/T content in this organism... 
GenColors-based comparative genome databases for small eukaryotic genomesMarius Felder
Genome Analysis Group, Leibniz Institute for Age Research Fritz Lipmann Institute, Beutenbergstr 11, 07745 Jena, Germany
Nucleic Acids Res 41:D692-9. 2013..de) were set up. Both new resources open up a single entry point for related genomes for the amoebozoa and fungal research communities and other interested users. Comparative genomics approaches are greatly facilitated by these resources...- High tandem repeat content in the genome of the short-lived annual fish Nothobranchius furzeri: a new vertebrate model for aging researchKathrin Reichwald
Leibniz Institute for Age Research Fritz Lipmann Institute, Beutenbergstr, 07745 Jena, Germany
Genome Biol 10:R16. 2009..Treatment with resveratrol and low temperature significantly extends the maximum life span. These features make N. furzeri a promising new vertebrate model for age research... - A first glimpse at the transcriptome of Physarum polycephalumGernot Glockner
Leibniz Institute for Age Research Fritz Lipmann Institute, Beutenbergstr, 11, D 07745 Jena, Germany
BMC Genomics 9:6. 2008..It now can be genetically manipulated, opening up the possibility of targeted functional analysis in this organism... - Should the draft chimpanzee sequence be finished?Stefan Taudien
Institut fur Molekulare Biotechnologie, Genomanalyse, Beutenbergstr 11, D 07743 Jena, Germany
Trends Genet 22:122-5. 2006..Although we suggest methods to reduce the number of such false positives efficiently, our study emphasizes the benefit expected from finishing the chimpanzee genome sequence...