C Gebhardt

Summary

Country: Germany

Publications

  1. ncbi request reprint Plant genome analysis: the state of the art
    Christiane Gebhardt
    Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Int Rev Cytol 247:223-84. 2005
  2. pmc Natural DNA variation at candidate loci is associated with potato chip color, tuber starch content, yield and starch yield
    Li Li
    Department Plant Breeding and Genetics, MPI for Plant Breeding Research, Carl von Linne Weg 10, 50829 Cologne, Germany
    Theor Appl Genet 116:1167-81. 2008
  3. pmc Statistical epistasis between candidate gene alleles for complex tuber traits in an association mapping population of tetraploid potato
    Li Li
    Department Plant Breeding and Genetics, MPI for Plant Breeding Research, Cologne, Germany
    Theor Appl Genet 121:1303-10. 2010
  4. pmc Natural variation of potato allene oxide synthase 2 causes differential levels of jasmonates and pathogen resistance in Arabidopsis
    Karolina M Pajerowska-Mukhtar
    Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, 50829 Cologne, Germany
    Planta 228:293-306. 2008
  5. pmc Natural diversity of potato (Solanum tuberosum) invertases
    Astrid M Draffehn
    Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, Koln, Germany
    BMC Plant Biol 10:271. 2010
  6. pmc Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments
    Agim Ballvora
    Max Planck Institut fur Zuchtungsforschung, Carl von Linne Weg 10, 50829 Köln, Germany
    BMC Genomics 8:112. 2007
  7. pmc Haplotype inference from unphased SNP data in heterozygous polyploids based on SAT
    Jost Neigenfind
    Bioinformatics, GabiPD team, Max Planck Institute of Molecular Plant Physiology, 14424 Potsdam Golm, Germany
    BMC Genomics 9:356. 2008
  8. ncbi request reprint Comparative mapping between potato (Solanum tuberosum) and Arabidopsis thaliana reveals structurally conserved domains and ancient duplications in the potato genome
    Christiane Gebhardt
    MPI für Züchtungsforschung, Carl von Linne Weg 10, 50829 Köln, Germany
    Plant J 34:529-41. 2003
  9. ncbi request reprint Organization of genes controlling disease resistance in the potato genome
    C Gebhardt
    Max Planck Institute for Breeding Research, Carl von Linne Weg 10, D 50829 Cologne, Germany
    Annu Rev Phytopathol 39:79-102. 2001
  10. ncbi request reprint Marker-assisted combination of major genes for pathogen resistance in potato
    C Gebhardt
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, 50829 Köln, Germany
    Theor Appl Genet 112:1458-64. 2006

Collaborators

  • Agim Ballvora
  • Francesco Salamini
  • Li Li
  • B Stich
  • K Schneider
  • Renate Schmidt
  • H Schoof
  • Marc Ghislain
  • Diana Bellin
  • Abdelali Barakat
  • M Delseny
  • Jane E Parker
  • Peter Oefner
  • Svenja Meyer
  • Ute Achenbach
  • Andreas M Rickert
  • Josef Strahwald
  • Jens Lübeck
  • Jürgen Paal
  • Astrid M Draffehn
  • Ute C Achenbach
  • Eckhard Tacke
  • Cristina M Menéndez
  • Hans Reinhard Hofferbert
  • Karolina Pajerowska-Mukhtar
  • Rico Basekow
  • Birgit Kersten
  • Karolina M Pajerowska-Mukhtar
  • Jost Neigenfind
  • Birgit Walkemeier
  • Rosa A Castillo Ruiz
  • Karolina M Pajerowska
  • Christina Angelika Bormann
  • Sebastian Meller
  • Hans de Jong
  • Xiaomin Tang
  • Joao Paulo
  • Evgenyia Ilarionova
  • Evgeniya Ilarionova
  • Gabor Gyetvai
  • Imre E Somssich
  • M Shahid Mukhtar
  • Svenja Diehl
  • Joachim Selbig
  • Sabine Rosahl
  • Nicolas Guex
  • Vincentius A Halim
  • Carmen Herrera
  • Ulrich Matzner
  • Manfred Klemm
  • Andreas Marcus Rickert
  • Jost Muth
  • Heike Henselewski
  • Khalid Meksem
  • Karsten Buhr
  • Rosa Angela Castillo Ruiz
  • Enrique Ritter
  • Alexandra Kalde
  • Ralf Schäfer-Pregl
  • Andreas Premstaller

Detail Information

Publications25

  1. ncbi request reprint Plant genome analysis: the state of the art
    Christiane Gebhardt
    Max Planck Institute for Plant Breeding Research, 50829 Cologne, Germany
    Int Rev Cytol 247:223-84. 2005
    ..Postfunctional analysis of natural variation of gene function and its effects on phenotype is envisaged to provide new diagnostic and therapeutic molecular tools for applications in plant breeding, adaptation, and ecology...
  2. pmc Natural DNA variation at candidate loci is associated with potato chip color, tuber starch content, yield and starch yield
    Li Li
    Department Plant Breeding and Genetics, MPI for Plant Breeding Research, Carl von Linne Weg 10, 50829 Cologne, Germany
    Theor Appl Genet 116:1167-81. 2008
    ..Comparing linkage and linkage disequilibrium between loci provided evidence for the existence of large haplotype blocks in the breeding materials analyzed...
  3. pmc Statistical epistasis between candidate gene alleles for complex tuber traits in an association mapping population of tetraploid potato
    Li Li
    Department Plant Breeding and Genetics, MPI for Plant Breeding Research, Cologne, Germany
    Theor Appl Genet 121:1303-10. 2010
    ..The combination of these two alleles increased the means of tuber starch content and starch yield. Biological models to explain the observed statistical epistatic interactions are discussed...
  4. pmc Natural variation of potato allene oxide synthase 2 causes differential levels of jasmonates and pathogen resistance in Arabidopsis
    Karolina M Pajerowska-Mukhtar
    Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, 50829 Cologne, Germany
    Planta 228:293-306. 2008
    ..Our results demonstrate how a candidate gene approach in combination with using the homologous Arabidopsis mutant as functional reporter can help to dissect the molecular basis of complex traits in non model crop plants...
  5. pmc Natural diversity of potato (Solanum tuberosum) invertases
    Astrid M Draffehn
    Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, Koln, Germany
    BMC Plant Biol 10:271. 2010
    ..The role of natural allelic variation of these genes in controlling the variation of tuber sugar content in different genotypes is unknown...
  6. pmc Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments
    Agim Ballvora
    Max Planck Institut fur Zuchtungsforschung, Carl von Linne Weg 10, 50829 Köln, Germany
    BMC Genomics 8:112. 2007
    ....
  7. pmc Haplotype inference from unphased SNP data in heterozygous polyploids based on SAT
    Jost Neigenfind
    Bioinformatics, GabiPD team, Max Planck Institute of Molecular Plant Physiology, 14424 Potsdam Golm, Germany
    BMC Genomics 9:356. 2008
    ..Potato species are tetraploid and highly heterozygous...
  8. ncbi request reprint Comparative mapping between potato (Solanum tuberosum) and Arabidopsis thaliana reveals structurally conserved domains and ancient duplications in the potato genome
    Christiane Gebhardt
    MPI für Züchtungsforschung, Carl von Linne Weg 10, 50829 Köln, Germany
    Plant J 34:529-41. 2003
    ..The partial genome coveridge and the redundancy of syntenic blocks limits the use of synteny for functional comparisons between the crop species potato and the model plant Arabidopsis...
  9. ncbi request reprint Organization of genes controlling disease resistance in the potato genome
    C Gebhardt
    Max Planck Institute for Breeding Research, Carl von Linne Weg 10, D 50829 Cologne, Germany
    Annu Rev Phytopathol 39:79-102. 2001
    ..The "candidate gene approach" enables the identification of markers highly useful for marker-assisted selection in potato breeding...
  10. ncbi request reprint Marker-assisted combination of major genes for pathogen resistance in potato
    C Gebhardt
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, 50829 Köln, Germany
    Theor Appl Genet 112:1458-64. 2006
    ..The selected plants can be used as sources of multiple resistance traits in pedigree breeding and are available from a potato germplasm bank...
  11. ncbi request reprint The R1 gene for potato resistance to late blight (Phytophthora infestans) belongs to the leucine zipper/NBS/LRR class of plant resistance genes
    Agim Ballvora
    Max Planck Institut fur Zuchtungsforschung, Carl von Linne Weg 10, 50829 Köln, Germany
    Plant J 30:361-71. 2002
    ..R1 is located within a hot spot for pathogen resistance on potato chromosome V. In comparison to the susceptibility allele, the resistance allele at the R1 locus represents a large insertion of a functional R gene...
  12. ncbi request reprint PCR-based cloning and segregation analysis of functional gene homologues in Beta vulgaris
    K Schneider
    Max Planck Institut fur Zuchtungsforschung, Koln, Germany
    Mol Gen Genet 262:515-24. 1999
    ..The different techniques used for the detection of polymorphisms are evaluated with respect to their sensitivity and versatility. In all, 42 functional genes have been assigned to the nine linkage groups of sugar beet...
  13. doi request reprint Using SNP markers to dissect linkage disequilibrium at a major quantitative trait locus for resistance to the potato cyst nematode Globodera pallida on potato chromosome V
    Ute Achenbach
    Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research, 50829, Cologne, Germany
    Theor Appl Genet 118:619-29. 2009
    ..LD group C comprising 18 SNPs corresponded to the 'HC' marker. LD group E included 16 SNPs and showed an association peak, which positioned one nematode resistance locus physically close to the R1 gene family...
  14. doi request reprint Comparison of the chromosome maps around a resistance hot spot on chromosome 5 of potato and tomato using BAC-FISH painting
    Ute C Achenbach
    Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, Koln, Germany
    Genome 53:103-10. 2010
    ..85 Mb and 1.2 Mb in potato and tomato, respectively. The GP21-GP179 interval is part of a genome segment known to have inverted map positions between potato and tomato...
  15. pmc Detection of epistatic interactions in association mapping populations: an example from tetraploid potato
    B Stich
    Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, Koln, Germany
    Heredity (Edinb) 107:537-47. 2011
    ..9) with the trait-coding loci, the statistical power to detect epistatic interactions, which explain 5-10% of the phenotypic variance, was of a size that seems promising for their detection...
  16. pmc Cold sweetening in diploid potato: mapping quantitative trait loci and candidate genes
    Cristina M Menéndez
    Max Planck Institut fur Zuchtungsforschung, 50829 Köln, Germany
    Genetics 162:1423-34. 2002
    ..The results suggest that allelic variants of enzymes operating in carbohydrate metabolic pathways contribute to the genetic variation in cold sweetening...
  17. ncbi request reprint Molecular cloning of the potato Gro1-4 gene conferring resistance to pathotype Ro1 of the root cyst nematode Globodera rostochiensis, based on a candidate gene approach
    Jürgen Paal
    MPI für Züchtungsforschung, Carl von Linne Weg 10, 50829 Köln, Germany
    Plant J 38:285-97. 2004
    ..RT-PCR also demonstrated that members of the Gro1 gene family are expressed in most potato tissues...
  18. pmc Single nucleotide polymorphisms in the allene oxide synthase 2 gene are associated with field resistance to late blight in populations of tetraploid potato cultivars
    Karolina Pajerowska-Mukhtar
    Max Planck Institute for Plant Breeding Research, Department for Plant Breeding and Genetics, Cologne, Germany
    Genetics 181:1115-27. 2009
    ..This finding supports StAOS2 as being one of the factors controlling natural variation of pathogen resistance...
  19. ncbi request reprint Potato homologs of Arabidopsis thaliana genes functional in defense signaling--identification, genetic mapping, and molecular cloning
    Karolina M Pajerowska
    Max Planck Institute for Plant Breeding Research, Cologne, Germany
    Mol Plant Microbe Interact 18:1107-19. 2005
    ..Our results form the basis for further studies on the contributions of these candidate genes to natural variation of potato disease resistance...
  20. ncbi request reprint Organization of phenylalanine ammonia lyase (PAL), acidic PR-5 and osmotin-like (OSM) defence-response gene families in the potato genome
    Rosa A Castillo Ruiz
    Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, 50829 Cologne, Germany
    Mol Genet Genomics 274:168-79. 2005
    ..The results will form the basis for further studies on the potential role of these defence-related loci in quantitative resistance to pathogens...
  21. pmc PoMaMo--a comprehensive database for potato genome data
    Svenja Meyer
    RZPD German Resource Centre for Genome Research GmbH, Berlin, Germany
    Nucleic Acids Res 33:D666-70. 2005
    ..The PoMaMo database is a comprehensive database for different potato genome data, and to date the only database containing SNP and InDel data from diploid and tetraploid potato genotypes...
  22. pmc DNA variation at the invertase locus invGE/GF is associated with tuber quality traits in populations of potato breeding clones
    Li Li
    Max Planck Institut fur Zuchtungsforschung, Koln, Germany
    Genetics 170:813-21. 2005
    ....
  23. ncbi request reprint Quantitative genotyping of single-nucleotide polymorphisms by allele-specific oligonucleotide hybridization on DNA microarrays
    Andreas M Rickert
    Max Planck Institute for Breeding Research, Carl von Linne Weg 10, 50829 Cologne, Germany
    Biotechnol Appl Biochem 42:93-6. 2005
    ..For SNP BA213c14t7/403, the quantitative discrimination between all four different naturally occurring genotypes could be demonstrated...
  24. ncbi request reprint Tagging quantitative trait loci for maturity-corrected late blight resistance in tetraploid potato with PCR-based candidate gene markers
    Christina Angelika Bormann
    Max Planck Institute for Plant Breeding Research, Carl von Linne Weg 10, D 50829 Cologne, Germany
    Mol Plant Microbe Interact 17:1126-38. 2004
    ....
  25. ncbi request reprint Genotyping of Snps in a polyploid genome by pyrosequencing
    Andreas M Rickert
    Stanford Genome Technology Center, Palo Alto, CA 94304, USA
    Biotechniques 32:592-3, 596-8, 600 passim. 2002
    ....