Research Topics
| Jurgen PoppSummaryAffiliation: Friedrich Schiller University Country: Germany Publications
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Detail Information
Publications
Assessment of two isolation techniques for bacteria in milk towards their compatibility with Raman spectroscopySusann Meisel
Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University Jena, Jena, Germany
Analyst 136:4997-5005. 2011....
Light-induced dynamics in conjugated bis(terpyridine) ligands--a case study toward photoactive coordination polymersRonald Siebert
Institute for Physical Chemistry IPC, Friedrich Schiller University of Jena, Helmholtzweg 4, 07743 Jena, Germany
Macromol Rapid Commun 33:481-97. 2012....
Analysis of single blood cells for CSF diagnostics via a combination of fluorescence staining and micro-Raman spectroscopyMichaela Harz
Institute of Physical Chemistry, Friedrich Schiller Universitat Jena, Helmholtzweg 4, D 07743 Jena, Germany
Analyst 133:1416-23. 2008..This capability with the possibility of accurate and rapid blood cell identification in cerebrospinal fluid is extremely promising for implementation in clinical diagnostics...
Raman spectroscopic detection of physiology changes in plasmid-bearing Escherichia coli with and without antibiotic treatmentAngela Walter
Institut fur Physikalische Chemie, Friedrich Schiller Universitat, Jena, Germany
Anal Bioanal Chem 400:2763-73. 2011..Independent cultural replicates of either ampicillin-challenged or non-challenged cultures are successfully identified with identification rates of over 90%...
From bulk to single-cell classification of the filamentous growing Streptomyces bacteria by means of Raman spectroscopyAngela Walter
Institut fur Physikalische Chemie, Friedrich Schiller Universitat, Helmholtzweg 4, 07743 Jena, Germany
Appl Spectrosc 65:1116-25. 2011..The classification utilizing a tree-like classifier is also applied to the Streptomyces single-cell spectra, resulting in classification accuracies between 80 and 93% for the investigated Streptomyces species...
Online-calibration for reliable and robust lab-on-a-chip surface enhanced Raman spectroscopy measurement in a liquid/liquid segmented flowAnne März
Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University Jena, Jena, Germany
Anal Chem 83:8337-40. 2011..In this contribution, we present a new approach to achieve reliable and robust measurements based on segmented flow LOC-SERS via online-wavenumber calibration...
Tumour cell identification by means of Raman spectroscopy in combination with optical traps and microfluidic environmentsSebastian Dochow
Institute of Photonic Technology, Jena, Germany
Lab Chip 11:1484-90. 2011..Implementation into microfluidic environments enables a high degree of automation that is required to improve the throughput of the approach for Raman activated cell sorting...
A concept to tailor electron delocalization: applying QTAIM analysis to phenyl-terpyridine compoundsMartin Presselt
Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743, Jena, Germany
J Phys Chem A 114:13163-74. 2010..Furthermore, the ellipticity in the BCP of the py-ph bond is related to the corresponding geometrical properties (e.g., bond length and dihedral angle) and to the DFT-calculated HOMO and LUMO energies...
Surface-enhanced Raman spectroscopy (SERS): progress and trendsDana Cialla
Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University Jena, Jena, Germany
Anal Bioanal Chem 403:27-54. 2012..To benefit from synergies, SERS is combined with other methods, such as scanning probe microscopy and microfluidics, which illustrates the broad applications of this powerful technique...
How to pre-process Raman spectra for reliable and stable models?Thomas Bocklitz
Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Jena, Germany
Anal Chim Acta 704:47-56. 2011..The suggested GA procedure results in models, which have a higher precision and are more stable against corrupting effects...
Detection of thiopurine methyltransferase activity in lysed red blood cells by means of lab-on-a-chip surface enhanced Raman spectroscopy (LOC-SERS)Anne März
Institute of Physical Chemisty, Friedrich Schiller University, Jena, Germany
Anal Bioanal Chem 400:2755-61. 2011..Being able to determine the TPMT activity before starting a treatment using 6-mercaptopurine, an optimized dosage can be applied to each patient and serious toxicity appearing within thiopurine treatment will be prevented...
Towards a fast, high specific and reliable discrimination of bacteria on strain level by means of SERS in a microfluidic deviceAngela Walter
Institut fur Physikalische Chemie, Friedrich Schiller Universitat Jena, Jena, Germany
Lab Chip 11:1013-21. 2011..Within this contribution the potential of our approach of bacterial identification for future application is discussed, focusing on the time-benefit and the combination with other microfluidic applications...
Raman spectroscopy as a potential tool for detection of Brucella spp. in milkSusann Meisel
Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University Jena, Jena, Germany
Appl Environ Microbiol 78:5575-83. 2012..The measurements we performed at the single-cell level thus allow fast identification within a few hours without a demanding process for sample preparation...
Characterizing cytochrome c states--TERS studies of whole mitochondriaRené Böhme
Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
Chem Commun (Camb) 47:11453-5. 2011..Protein structures (cytochrome c) were visualized by TERS measurements on whole mitochondria referring to specific spectral features describing the electronic state of the heme moiety...
UV cross-linking of unmodified DNA on glass surfacesThomas Schüler
Jenaer Biochip Initiative, Institute of Physical Chemistry, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany
Anal Bioanal Chem 395:1097-105. 2009..However, higher binding rates can be achieved when using amino-modified oligonucleotides on an epoxy surface. The limit of detection for the used settings was 5 pM...
Droplet formation via flow-through microdevices in Raman and surface enhanced Raman spectroscopy--concepts and applicationsAnne März
Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
Lab Chip 11:3584-92. 2011..Within this contribution, previous reported applications on droplet-based flow-through Raman and SERS approaches and the additional benefit with regard to the importance in the field of analytics are considered...
Dual emission from highly conjugated 2,2':6':2″-terpyridine complexes-a potential route to white emittersRonald Siebert
Institute for Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
Macromol Rapid Commun 31:883-8. 2010..Thus, by structurally tuning the electronic coupling of the ππ* and the MLCT states a new synthetic route toward white emitters, which can subsequently be incorporated into polymers, is opened...
Structural analysis of the antimalarial drug halofantrine by means of Raman spectroscopy and density functional theory calculationsTorsten Frosch
Friedrich Schiller Universitat Jena, Institut fur Physikalische Chemie, Jena, Germany
J Biomed Opt 15:041516. 2010..Complementary IR spectroscopy is performed for an investigation of vibrations of polar functional groups of the halofantrine molecule...
Towards multiple readout application of plasmonic arraysDana Cialla
Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
Beilstein J Nanotechnol 2:501-8. 2011..The results shown open the way to more flexible use of plasmonic arrays in bioanalytics...
Raman spectroscopic determination of norbixin and tartrazine in sugarUte Uhlemann
Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller Universitat, Jena, Germany
Food Addit Contam Part A Chem Anal Control Expo Risk Assess 29:1244-55. 2012..A detection limit of 250 ng g⁻¹ for norbixin and 989 ng g⁻¹ for tartrazine in solid sugar samples could be reached by logistic regression...
Analysis of the cytochrome distribution via linear and nonlinear Raman spectroscopyAngela Walter
Institute of Physical Chemistry, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany
Analyst 135:908-17. 2010..commune or other basidiomycetous fungi, by means of resonance Raman microspectroscopy and CARS microscopy. These Raman methods bear the potential of label-free in vivo mitochondria localization and investigation...
The influence of intracellular storage material on bacterial identification by means of Raman spectroscopyValerian Ciobotă
Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
Anal Bioanal Chem 397:2929-37. 2010..Although the presence of PHB induced severe changes in the Raman spectra, our results suggest that Raman spectroscopy can be successfully used for identification as long as the bacteria are not in the stationary phase...
A study of Docetaxel-induced effects in MCF-7 cells by means of Raman microspectroscopyKatharina Hartmann
Institute of Physical Chemistry and Abbe Center of Photonics, University of Jena, Helmholtzweg 4, 07743, Jena, Germany
Anal Bioanal Chem 403:745-53. 2012..Thereby we were able to differentiate treated from untreated MCF-7 cells and to quantify the cell-drug response by utilizing linear discriminant analysis models...
Protein-induced excited-state dynamics of protochlorophyllideRobert Hanf
Institute for Physical Chemistry and Abbe Centre of Photonics, Friedrich Schiller University Jena, Helmholtzweg 4, D 07743 Jena, Germany
J Phys Chem A 115:7873-81. 2011..The possible relevance of this result for the catalytic reaction in the enzyme POR is discussed...
Identification and differentiation of single cells from peripheral blood by Raman spectroscopic imagingUte Neugebauer
Institute of Photonic Technology, Jena, Germany
J Biophotonics 3:579-87. 2010..The model was successfully applied to identify single cells from an independent mixture of cells based on their vibrational spectra. The classification was confirmed by fluorescence staining of the cells after the Raman measurement...
Fluorescence dye as novel label molecule for quantitative SERS investigations of an antibioticAnne März
Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
Anal Bioanal Chem 402:2625-31. 2012..With the new concept of binding the label molecule directly to the analyte molecule, the application of linkage compounds like antibodies or any other recognition molecules becomes dispensable...
Toward a spectroscopic hemogram: Raman spectroscopic differentiation of the two most abundant leukocytes from peripheral bloodAnuradha Ramoji
Center for Sepsis Control and Care, Jena University Hospital, Jena, Germany
Anal Chem 84:5335-42. 2012..This marks a promising step toward automated Raman spectroscopic blood analysis which holds the potential not only to assign the numbers of the cells but also to yield important biochemical information...
Toward in vivo chemical imaging of epicuticular waxesIna Weissflog
Institute of Photonic Technology, Jena, Germany
Plant Physiol 154:604-10. 2010..aff. deliciosa). We anticipate that the work presented will open a doorway for online monitoring of formation and alterations of epicuticular wax layers...
Localizing and identifying living bacteria in an abiotic environment by a combination of Raman and fluorescence microscopyMario Krause
Institute for Physical Chemistry, University of Jena, Helmholtzweg 4, 07743 Jena, Germany
Anal Chem 80:8568-75. 2008..The living cells were identified by means of Raman spectroscopy in combination with a support vector machine. Furthermore, the localization of bacterial cells in a mix of abiotic particles is demonstrated...
Ruthenium(II) photosensitizers of tridentate click-derived cyclometalating ligands: a joint experimental and computational studyBenjamin Schulze
Laboratory of Organic and Macromolecular Chemistry IOMC, Friedrich Schiller University Jena, Humboldtstr 10, 07743 Jena, Germany
Chemistry 18:4010-25. 2012..Thus, the complexes reveal great potential for dye-sensitized solar-cell applications...
Calcite biomineralization by bacterial isolates from the recently discovered pristine karstic herrenberg caveAnna Rusznyák
Aquatic Geomicrobiology Group, Institute of Ecology, Friedrich Schiller University Jena, Jena, Germany
Appl Environ Microbiol 78:1157-67. 2012....
Unsupervised unmixing of Raman microspectroscopic images for morphochemical analysis of non-dried brain tumor specimensNorbert Bergner
Institute of Photonic Technology, Albert Einstein Straße 9, 07745, Jena, Germany
Anal Bioanal Chem 403:719-25. 2012..The results are compared for both unmixing algorithms and with previously reported supervised spectral decomposition techniques...
Disruption-free imaging by Raman spectroscopy reveals a chemical sphere with antifouling metabolites around macroalgaeKatharina Grosser
IAAC, Bioorganic Analytics, Friedrich Schiller University Jena, Lessingstr 8, Jena, 07743, Germany
Biofouling 28:687-96. 2012....
Biochemical imaging below the diffraction limit--probing cellular membrane related structures by tip-enhanced Raman spectroscopy (TERS)René Böhme
Institute of Physical Chemistry, Friedrich Schiller University Jena, Jena, Germany
J Biophotonics 3:455-61. 2010..Since a spatial differentiation between different compositional domains is difficult to achieve by topographic features only, the combination of morphology and spectral data enables a much more detailed characterization of biomembranes...
Protonation effects on the resonance Raman properties of a novel (terpyridine)Ru(4H-imidazole) complex: an experimental and theoretical case studyStephan Kupfer
Institute for Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743, Jena, Germany
Phys Chem Chem Phys 13:15580-8. 2011..Finally, the examination of the molecular orbitals and of the RR spectra for the MLCT state shows that protonation favors a charge transfer excitation to the 4H-imidazole ligand...
Distribution of amygdalin in apricot (Prunus armeniaca) seeds studied by Raman microscopic imagingChristoph Krafft
Institute of Photonic Technology, Jena, Germany
Appl Spectrosc 66:644-9. 2012..The observed biological variability of the amygdalin distribution cannot yet be explained satisfactorily and requires further investigation...
Excited-state annihilation in a homodinuclear ruthenium complexChristian Kuhnt
Institute for Physical Chemistry, Friedrich Schiller University Jena, Jena Center of Soft Matter and Abbe Center of Photonics, Helmhotzweg 4, 07743 Jena, Germany
Chem Commun (Camb) 47:3820-1. 2011..The observation of pump-intensity dependent triplet-triplet annihilation highlights the importance of considering various loss mechanisms in the design of artificial photosynthetic assemblies...
The molecular mechanism of dual emission in terpyridine transition metal complexes--ultrafast investigations of photoinduced dynamicsRonald Siebert
Institute for Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
Phys Chem Chem Phys 13:1606-17. 2011....
SERS as tool for the analysis of DNA-chips in a microfluidic platformKatharina K Strelau
Jenaer Biochip Initiative, Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07745 Jena, Germany
Anal Bioanal Chem 396:1381-4. 2010..With this setup, we are able to distinguish between different complementary and non-complementary target sequences in one sample solution...
Direct analysis of clinical relevant single bacterial cells from cerebrospinal fluid during bacterial meningitis by means of micro-Raman spectroscopyMichaela Harz
Institute of Physical Chemistry, Friedrich Schiller Universitat Jena, Helmholtzweg 4, Jena, Germany
J Biophotonics 2:70-80. 2009..meningitidis cells from patients with bacterial meningitis could be achieved...
