Research Topics
Genomes and GenesSpecies | Detlev ArendtSummaryAffiliation: European Molecular Biology Laboratory Country: Germany Publications
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Detail Information
Publications
Emerging systems: between vertebrates and arthropods, the LophotrochozoaKristin Tessmar-Raible
European Molecular Biology Laboratory, Meyerhofstrasse 1, 69012, Heidelberg, Germany
Curr Opin Genet Dev 13:331-40. 2003..This is also reflected in the level of genes, making these groups ideally suited for developmental comparative studies...
The segmental pattern of otx, gbx, and Hox genes in the annelid Platynereis dumeriliiPatrick R H Steinmetz
Developmental Biology Unit, European Molecular Biology Laboratory, Meyerhofstrasse 1, 69012 Heidelberg, Germany
Evol Dev 13:72-9. 2011..Our data thus support the view that an ancestral ground pattern of segmental identities existed in the trunk of the last common protostome ancestor that was lost or modified in protostomes lacking overt segmentation...
The evolution of cell types in animals: emerging principles from molecular studiesDetlev Arendt
European Molecular Biology Laboratory, Meyerhofstrabetae 1, 69012 Heidelberg, Germany
Nat Rev Genet 9:868-82. 2008....
Ciliary photoreceptors with a vertebrate-type opsin in an invertebrate brainDetlev Arendt
Developmental Biology Department, European Molecular Biology Laboratory, Meyerhofstrasse 1, 69012 Heidelberg, Germany
Science 306:869-71. 2004..Comparative analysis indicates that both types of photoreceptors, with distinct opsins, coexisted in Urbilateria, the last common ancestor of insects and vertebrates, and sheds new light on vertebrate eye evolution...
Ancient animal microRNAs and the evolution of tissue identityFoteini Christodoulou
Developmental Biology Unit, European Molecular Biology Laboratory, D 69117 Heidelberg, Germany
Nature 463:1084-8. 2010..Also, they outline a minimum set of cell types and tissues that existed in the protostome-deuterostome ancestor...
Molecular architecture of annelid nerve cord supports common origin of nervous system centralization in bilateriaAlexandru S Denes
Developmental Biology Unit, European Molecular Biology Laboratory, Heidelberg, 69117, Germany
Cell 129:277-88. 2007..Our data indicate that this mediolateral architecture was present in the last common bilaterian ancestor and thus support a common origin of nervous system centralization in Bilateria...
The evolution of nervous system centralizationDetlev Arendt
Developmental Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany
Philos Trans R Soc Lond B Biol Sci 363:1523-8. 2008..This way, different aspects of the molecular architecture of the urbilaterian nervous system are reconstructed and yield insight into the degree of centralization that was in place in the bilaterian ancestors...
Evolution of eyes and photoreceptor cell typesDetlev Arendt
European Molecular Biology Laboratory, Developmental Biology Programme, Heidelberg, Germany
Int J Dev Biol 47:563-71. 2003..I propose that the retinal ganglion, amacrine and horizontal cells are evolutionary sister cell types that evolved from a common rhabdomeric photoreceptor cell precursor...
Conserved sensory-neurosecretory cell types in annelid and fish forebrain: insights into hypothalamus evolutionKristin Tessmar-Raible
Developmental Biology Unit, European Molecular Biology Laboratory, Meyerhofstrasse 1, D 69012 Heidelberg, Germany
Cell 129:1389-400. 2007....
Mechanism of phototaxis in marine zooplanktonGaspar Jekely
Developmental Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany
Nature 456:395-9. 2008..We propose that the underlying direct coupling of light sensing and ciliary locomotor control was a principal feature of the proto-eye and an important landmark in the evolution of animal eyes...
Development of pigment-cup eyes in the polychaete Platynereis dumerilii and evolutionary conservation of larval eyes in BilateriaDetlev Arendt
European Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidelberg, Germany
Development 129:1143-54. 2002..We propose that pax6-, six1/2- and ath-positive larval eyes, as found in today's trochophora, were present already in Urbilateria...
Polychaete trunk neuroectoderm converges and extends by mediolateral cell intercalationPatrick R H Steinmetz
European Molecular Biology Laboratory, Developmental Biology Unit, Meyerhofstrasse 1, 69012 Heidelberg, Germany
Proc Natl Acad Sci U S A 104:2727-32. 2007..Based on these findings, we propose that convergent extension movements of the trunk neuroectoderm represent an ancestral feature of bilaterian development that triggered the separation of mouth and anus along the elongating trunk...
Profiling by image registration reveals common origin of annelid mushroom bodies and vertebrate palliumRaju Tomer
Developmental Biology Unit, European Molecular Biology Laboratory, D 69117 Heidelberg, Germany
Cell 142:800-9. 2010..These data indicate deep homology of pallium and mushroom bodies and date back the origin of higher brain centers to prebilaterian times...
New animal models for evolution and developmentKristin Tessmar-Raible
European Molecular Biology Laboratory, Meyerhofstrasse 1, 69012 Heidelberg, Germany
Genome Biol 6:303. 2005..A report on the annual UK Evolutionary Developmental Biology meeting, Oxford, UK, 13 September 2004...
Spiralians in the limelightDetlev Arendt
European Molecular Biology Laboratory, Meyerhofstrasse 1, 69115 Germany
Genome Biol 5:303. 2003
Cellular resolution expression profiling using confocal detection of NBT/BCIP precipitate by reflection microscopyGaspar Jekely
Developmental Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany
Biotechniques 42:751-5. 2007..Whole-mount reflection CLSM will thus greatly facilitate large-scale cellular resolution expression profiling in vertebrate and invertebrate model organisms...
Vertebrate-type intron-rich genes in the marine annelid Platynereis dumeriliiFlorian Raible
Developmental Unit, European Molecular Biological Laboratory EMBL, Meyerhofstrasse 1, D 69117 Heidelberg, Germany
Science 310:1325-6. 2005..A comparison of coding exon sequences confirms the ancestral nature of Platynereis and human genes. Thus, the urbilaterian ancestor had complex, intron-rich genes that have been retained in Platynereis and human...
CNS evolution: new insight from the mudElia Benito-Gutiérrez
Developmental Biology Unit, European Molecular Biology Laboratory, D 69117 Heidelberg, Germany
Curr Biol 19:R640-2. 2009....
AQUA: automated quality improvement for multiple sequence alignmentsJean Muller
European Molecular Biology Laboratory, Meyerhofstrasse 1, 69012 Heidelberg, Germany
Bioinformatics 26:263-5. 2010..Availability: AQUA is implemented in Tcl/Tk and runs in command line on all platforms. The source code is available under the GNU GPL license. Source code, README and Supplementary data are available at http://www.bork.embl.de/Docu/AQUA...
Metazoan evolution: some animals are more equal than othersFlorian Raible
Developmental Biology Programme, European Molecular Biology Laboratory, Heidelberg, Germany
Curr Biol 14:R106-8. 2004..The most surprising outcome is that human genes seem to be closer to the bilaterian roots than previously assumed...
4DXpress: a database for cross-species expression pattern comparisonsYannick Haudry
European Molecular Biology Laboratory EMBL, Meyerhofstrasse 1, 69117 Heidelberg, Germany
Nucleic Acids Res 36:D847-53. 2008..4DXpress will be an invaluable tool for developmental as well as for computational biologists interested in gene regulation and evolution. 4DXpress is available at http://ani.embl.de/4DXpress...
Fluorescent two-color whole mount in situ hybridization in Platynereis dumerilii (Polychaeta, Annelida), an emerging marine molecular model for evolution and developmentKristin Tessmar-Raible
European Molecular Biology Laboratory, Heidelberg, Germany
Biotechniques 39:460, 462, 464. 2005
Opsins and clusters of sensory G-protein-coupled receptors in the sea urchin genomeFlorian Raible
Computational Unit, EMBL, 69117 Heidelberg, Germany
Dev Biol 300:461-75. 2006..Notably, these structures also express different opsins, indicating that sea urchins possess an intricate molecular set-up to sense their environment...
Genes and homology in nervous system evolution: comparing gene functions, expression patterns, and cell type molecular fingerprintsDetlev Arendt
European Molecular Biology Laboratory, Meyerhofstrasse 1, 69012 Heidelberg, Germany
Theory Biosci 124:185-97. 2005..Here, a similar "molecular fingerprint" of cells is taken as indication of cross-bilaterian homology. This approach makes it possible to reconstruct the cell-type repertoire of the urbilaterian nervous system...
The 'division of labour' model of eye evolutionDetlev Arendt
European Molecular Biology Laboratory, Meyerhofstrasse 1, 69012 Heidelberg, Germany
Philos Trans R Soc Lond B Biol Sci 364:2809-17. 2009..Functional segregation of cell types in eye evolution also explains the emergence of more elaborate photosensory-motor axonal circuits, with interneurons relaying the visual information...
Six3Patrick Rh Steinmetz
Developmental Biology Unit, European Molecular Biology Laboratory, Meyerhofstrasse 1, 69012 Heidelberg, Germany
Evodevo 1:14. 2010..abstract:..
Evolution of intraflagellar transport from coated vesicles and autogenous origin of the eukaryotic ciliumGaspar Jekely
European Molecular Biology Laboratory, Heidelberg, Germany
Bioessays 28:191-8. 2006..We propose a scenario for how the initial membrane patch gradually protruded to enhance exposure to the environment, then started to move, and finally compartmentalised to render receptor signalling and ciliary beating more efficient...
Hox gene expression in larval development of the polychaetes Nereis virens and Platynereis dumerilii (Annelida, Lophotrochozoa)Milana Kulakova
Laboratory of Experimental Embryology, Biological Institute of State University of St Petersburg, Oranienbaumskoe sh 2, 198504 Starii Petergoff, St Petersburg, Russia
Dev Genes Evol 217:39-54. 2007....
Arthropod-like expression patterns of engrailed and wingless in the annelid Platynereis dumerilii suggest a role in segment formationRenaud de Rosa
, Centre National de la Recherche Scientifique, UPR 2167, 1 Avenue de la Terrasse, 91190 Gif sur Yvette, France
Curr Biol 13:1876-81. 2003..In agreement with similarities in segment ontogeny and morphological organization in arthropods and annelids, we interpret our results as molecular evidence of a segmented ancestor of protostomes...
atonal- and achaete-scute-related genes in the annelid Platynereis dumerilii: insights into the evolution of neural basic-Helix-Loop-Helix genesElena Simionato
Evolution et Développement des métazoaires, Centre de Génétique Moléculaire UPR 2167 CNRS, 1, av de terrasse, 91198 Gif sur Yvette, France
BMC Evol Biol 8:170. 2008....
The expression of a hunchback ortholog in the polychaete annelid Platynereis dumerilii suggests an ancestral role in mesoderm development and neurogenesisPierre Kerner
, , 1 Avenue de la Terrasse, 91198 Gif-sur-Yvette Cedex, France
Dev Genes Evol 216:821-8. 2006..These data suggest altogether that these functions are ancestral to protostomes...
