J Mark Cock

Summary

Affiliation: Station Biologique
Country: France

Publications

  1. pmc In silico survey of the mitochondrial protein uptake and maturation systems in the brown alga Ectocarpus siliculosus
    Ludovic Delage
    Universite Pierre et Marie Curie, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, Roscoff, France
    PLoS ONE 6:e19540. 2011
  2. doi request reprint Evolution and regulation of complex life cycles: a brown algal perspective
    J Mark Cock
    UPMC Univ Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, Place Georges Teissier, BP74, 29682 Roscoff Cedex, France CNRS, UMR 7139, Laboratoire International Associé Dispersal and Adaptation in Marine Species, Station Biologique de Roscoff, Place Georges Teissier, BP74, 29682 Roscoff Cedex, France Electronic address
    Curr Opin Plant Biol 17:1-6. 2014
  3. pmc Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress
    Simon M Dittami
    UPMC Univ Paris 6, UMR 7139 Végétaux marins et Biomolécules, Station Biologique, 29680 Roscoff, France
    Genome Biol 10:R66. 2009
  4. pmc Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae)
    Simon M Dittami
    UPMC Univ Paris 6, UMR 7139 Marine Plants and Biomolecules, Station Biologique, 29680 Roscoff, France
    BMC Mol Biol 12:2. 2011
  5. pmc Normalisation genes for expression analyses in the brown alga model Ectocarpus siliculosus
    Aude Le Bail
    UPMC Univ Paris 6, UMR 7139 Végétaux marins et Biomolécules, Station Biologique, F 29682, Roscoff, France
    BMC Mol Biol 9:75. 2008
  6. ncbi request reprint The Ectocarpus genome and the independent evolution of multicellularity in brown algae
    J Mark Cock
    UPMC Universite Paris 6, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, Place Georges Teissier, BP74, 29682 Roscoff Cedex, France
    Nature 465:617-21. 2010
  7. doi request reprint Genetic crosses between Ectocarpus strains
    Susana M Coelho
    UPMC Universite Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, BP74, 29682 Roscoff Cedex, France
    Cold Spring Harb Protoc 2012:262-5. 2012
  8. doi request reprint Extraction of high-quality genomic DNA from Ectocarpus
    Susana M Coelho
    UPMC Universite Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, 29682 Roscoff Cedex, France
    Cold Spring Harb Protoc 2012:365-8. 2012
  9. pmc OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus
    Susana M Coelho
    Centre National de la Recherche Scientifique, Unité Mixte de Recherche 7139, Laboratoire International Associé Dispersal and Adaptation in Marine Species, Station Biologique de Roscoff, 29682 Roscoff Cedex, France
    Proc Natl Acad Sci U S A 108:11518-23. 2011
  10. doi request reprint Isolation and regeneration of protoplasts from Ectocarpus
    Susana M Coelho
    UPMC Universite Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, 29682 Roscoff Cedex, France
    Cold Spring Harb Protoc 2012:361-4. 2012

Detail Information

Publications24

  1. pmc In silico survey of the mitochondrial protein uptake and maturation systems in the brown alga Ectocarpus siliculosus
    Ludovic Delage
    Universite Pierre et Marie Curie, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, Roscoff, France
    PLoS ONE 6:e19540. 2011
    ..Several of the protein import components identified in Ectocarpus, such as Tim21, Tim50 and metaxin, have also been found in other stramenopiles and this study suggests an early origin during the evolution of the eukaryotes...
  2. doi request reprint Evolution and regulation of complex life cycles: a brown algal perspective
    J Mark Cock
    UPMC Univ Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, Place Georges Teissier, BP74, 29682 Roscoff Cedex, France CNRS, UMR 7139, Laboratoire International Associé Dispersal and Adaptation in Marine Species, Station Biologique de Roscoff, Place Georges Teissier, BP74, 29682 Roscoff Cedex, France Electronic address
    Curr Opin Plant Biol 17:1-6. 2014
    ....
  3. pmc Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress
    Simon M Dittami
    UPMC Univ Paris 6, UMR 7139 Végétaux marins et Biomolécules, Station Biologique, 29680 Roscoff, France
    Genome Biol 10:R66. 2009
    ..Ectocarpus siliculosus is being established as a genetic and genomic model for the brown algal lineage, but little is known about its response to abiotic stress...
  4. pmc Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae)
    Simon M Dittami
    UPMC Univ Paris 6, UMR 7139 Marine Plants and Biomolecules, Station Biologique, 29680 Roscoff, France
    BMC Mol Biol 12:2. 2011
    ....
  5. pmc Normalisation genes for expression analyses in the brown alga model Ectocarpus siliculosus
    Aude Le Bail
    UPMC Univ Paris 6, UMR 7139 Végétaux marins et Biomolécules, Station Biologique, F 29682, Roscoff, France
    BMC Mol Biol 9:75. 2008
    ..A series of genes that can be used to normalise expression analyses is required for these studies...
  6. ncbi request reprint The Ectocarpus genome and the independent evolution of multicellularity in brown algae
    J Mark Cock
    UPMC Universite Paris 6, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, Place Georges Teissier, BP74, 29682 Roscoff Cedex, France
    Nature 465:617-21. 2010
    ....
  7. doi request reprint Genetic crosses between Ectocarpus strains
    Susana M Coelho
    UPMC Universite Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, BP74, 29682 Roscoff Cedex, France
    Cold Spring Harb Protoc 2012:262-5. 2012
    ..Genetic crosses allow several classical genetic methodologies to be applied in Ectocarpus, including allelic complementation tests, backcrosses, combination of different genetic mutations, and outcrosses to create mapping populations...
  8. doi request reprint Extraction of high-quality genomic DNA from Ectocarpus
    Susana M Coelho
    UPMC Universite Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, 29682 Roscoff Cedex, France
    Cold Spring Harb Protoc 2012:365-8. 2012
    ....
  9. pmc OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus
    Susana M Coelho
    Centre National de la Recherche Scientifique, Unité Mixte de Recherche 7139, Laboratoire International Associé Dispersal and Adaptation in Marine Species, Station Biologique de Roscoff, 29682 Roscoff Cedex, France
    Proc Natl Acad Sci U S A 108:11518-23. 2011
    ....
  10. doi request reprint Isolation and regeneration of protoplasts from Ectocarpus
    Susana M Coelho
    UPMC Universite Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, 29682 Roscoff Cedex, France
    Cold Spring Harb Protoc 2012:361-4. 2012
    ....
  11. doi request reprint How to cultivate Ectocarpus
    Susana M Coelho
    UPMC Universite Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, BP74, 29682 Roscoff Cedex, France
    Cold Spring Harb Protoc 2012:258-61. 2012
    ..All manipulations of Ectocarpus cultures should be performed in a clean environment (if possible, under a laminar flow hood). Forceps should be dipped in ethanol and allowed to dry under the hood...
  12. doi request reprint Immunostaining of Ectocarpus cells
    Susana M Coelho
    UPMC Universite Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, 29682 Roscoff Cedex, France
    Cold Spring Harb Protoc 2012:369-72. 2012
    ..All incubations described below are carried out on a platform shaker at room temperature. Use high-quality microscope slides to avoid imperfections in the glass that can be a problem for confocal laserscan microscopy analysis...
  13. doi request reprint Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes
    Gurvan Michel
    UPMC University Paris 6, UMR 7139 Marine Plants and Biomolecules, Station Biologique de Roscoff, F 29682 Roscoff, Bretagne, France
    New Phytol 188:67-81. 2010
    ..The starch metabolism of the red algal endosymbiont was entirely lost in the ancestor of Stramenopiles. In light of these novel findings we question the validity of the 'Chromalveolate hypothesis'...
  14. pmc Plastid genomes of two brown algae, Ectocarpus siliculosus and Fucus vesiculosus: further insights on the evolution of red-algal derived plastids
    Gildas Le Corguillé
    CNRS, UMR7139, Marine Plants and Biomolecules, Station Biologique, Roscoff, France
    BMC Evol Biol 9:253. 2009
    ..Large-scale genomic analyses have shown to be a powerful tool for phylogenetic reconstruction but insufficient sequence data have been available for red-algal derived plastid genomes...
  15. doi request reprint A sequence-tagged genetic map for the brown alga Ectocarpus siliculosus provides large-scale assembly of the genome sequence
    Svenja Heesch
    UPMC Univ Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, Place Georges Teissier, BP74, 29682 Roscoff Cedex, France
    New Phytol 188:42-51. 2010
    ..1% of the genome sequence. • The Ectocarpus genetic map described here not only provides a large-scale assembly of the genome sequence, but also represents an important tool for future genetic analysis using this organism...
  16. doi request reprint The cell wall polysaccharide metabolism of the brown alga Ectocarpus siliculosus. Insights into the evolution of extracellular matrix polysaccharides in Eukaryotes
    Gurvan Michel
    UPMC University Paris 6, UMR 7139 Marine Plants and Biomolecules, Station Biologique de Roscoff, F 29682 Roscoff, Bretagne, France
    New Phytol 188:82-97. 2010
    ..By contrast, the biosynthetic route for sulfated fucans is an ancestral pathway, conserved with animals. These findings shine a new light on the origin and evolution of cell wall polysaccharides in other Eukaryotes...
  17. doi request reprint Life-cycle-generation-specific developmental processes are modified in the immediate upright mutant of the brown alga Ectocarpus siliculosus
    Akira F Peters
    UPMC Universite Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, Place Georges Teissier, BP74, 29682 Roscoff Cedex, France
    Development 135:1503-12. 2008
    ....
  18. pmc Genetic regulation of life cycle transitions in the brown alga Ectocarpus
    Susana M Coelho
    CNRS, UMR 7139, Station Biologique de Roscoff, Roscoff, France
    Plant Signal Behav 6:1858-60. 2011
    ..Analysis of Ectocarpus life cycle mutants is providing insights into several life-cycle-related processes including parthenogenesis, symmetric/asymmetric initial cell divisions and sex determination...
  19. doi request reprint Development and physiology of the brown alga Ectocarpus siliculosus: two centuries of research
    Bénédicte Charrier
    UMR7139, Station Biologique, Centre National de la Recherche Scientifique, Université Pierre and Marie Curie Paris VI, Place Georges Teissier, 29 682 Roscoff cedex, France
    New Phytol 177:319-32. 2008
    ..In this review we look back over two centuries of work on this brown alga and highlight the advances that have led to the choice of E. siliculosus as a genomic and genetic model organism for the brown algae...
  20. doi request reprint Ecological and evolutionary genomics of marine photosynthetic organisms
    Susana M Coelho
    UPMC Universite Paris 06, Station Biologique de Roscoff, Roscoff, France
    Mol Ecol 22:867-907. 2013
    ....
  21. ncbi request reprint Copper stress proteomics highlights local adaptation of two strains of the model brown alga Ectocarpus siliculosus
    Andrés Ritter
    Universite Pierre et Marie Curie Paris 6, Végétaux marins et biomolécules, Station Biologique, Place Georges Teissier, Roscoff, France
    Proteomics 10:2074-88. 2010
    ..siliculosus strains studied at the physiological and proteomic levels strongly suggest that persistent copper stress may represent a selective force leading to the development of strains genetically adapted to copper contaminated sites...
  22. doi request reprint Ectocarpus: a model organism for the brown algae
    Susana M Coelho
    UPMC Universite Paris 06, The Marine Plants and Biomolecules Laboratory, UMR 7139, Station Biologique de Roscoff, BP74, 29682 Roscoff Cedex, France
    Cold Spring Harb Protoc 2012:193-8. 2012
    ....
  23. pmc HECTAR: a method to predict subcellular targeting in heterokonts
    Bernhard Gschloessl
    UPMC Univ Paris 6, UMR 7139 Végétaux marins et Biomolécules, Station Biologique, F 29682, Roscoff, France
    BMC Bioinformatics 9:393. 2008
    ..HECTAR, a subcellular targeting prediction method which takes into account the specific properties of heterokont proteins, has been developed to address this problem...
  24. ncbi request reprint Complex life cycles of multicellular eukaryotes: new approaches based on the use of model organisms
    Susana M Coelho
    The Marine Plants and Biomolecules Laboratory, UMR 7139 Centre National de la Recherche Scientifique and Université Pierre et Marie Curie, Station Biologique de Roscoff, Place Georges Teissier, BP74, 29682 Roscoff Cedex, France
    Gene 406:152-70. 2007
    ..Finally, we describe an emerging model organism from the brown algae, Ectocarpus siliculosus, and highlight the potential of this system for the investigation of the mechanisms that regulate complex life cycles...