Xavier Bailly

Summary

Affiliation: Station Biologique
Country: France

Publications

  1. ncbi request reprint Development of a lab-made microarray for analyzing the genetic diversity of nitrogen fixing symbionts Sinorhizobium meliloti and Sinorhizobium medicae
    Xavier Bailly
    Laboratoire des Symbioses Tropicales et Méditerranéennes, UMR113 IRD INRA CIRAD UM2 Agro M, Campus International de Baillarguet, Montpellier F34398, France
    J Microbiol Methods 67:114-24. 2006
  2. pmc Myogenesis in the basal bilaterian Symsagittifera roscoffensis (Acoela)
    Henrike Semmler
    University of Copenhagen, Department of Biology, Research Group for Comparative Zoology, Universitetsparken 15, DK 2100 Copenhagen Ø, Denmark
    Front Zool 5:14. 2008
  3. pmc A phylogenomic profile of globins
    Serge N Vinogradov
    Department of Biochemistry and Molecular Biology, Wayne State University School of Medicine, Detroit, MI 48201, USA
    BMC Evol Biol 6:31. 2006
  4. ncbi request reprint Evolution of the sulfide-binding function within the globin multigenic family of the deep-sea hydrothermal vent tubeworm Riftia pachyptila
    Xavier Bailly
    Station Biologique de Roscoff, UPR 9042 CNRS UPMC INSU, Laboratoire Ecophysiologie, Roscoff, France
    Mol Biol Evol 19:1421-33. 2002
  5. pmc The loss of the hemoglobin H2S-binding function in annelids from sulfide-free habitats reveals molecular adaptation driven by Darwinian positive selection
    Xavier Bailly
    Equipe Evolution et Génétique des Populations Marines, Station Biologique de Roscoff, Unité Mixte de Recherche 7127, Centre National de la Recherche Scientifique, Universite Pierre et Marie Curie, 29680 Roscoff, France
    Proc Natl Acad Sci U S A 100:5885-90. 2003
  6. ncbi request reprint The sulfide binding function of annelid hemoglobins: relic of an old biosystem?
    Xavier Bailly
    Equipe Ecophysiologie, Station Biologique de Roscoff, Centre National de la Recherche Scientifique, Universite Pierre et Marie Curie, 29680 Roscoff, France
    J Inorg Biochem 99:142-50. 2005
  7. ncbi request reprint Globin gene family evolution and functional diversification in annelids
    Xavier Bailly
    Equipe Ecophysiologie Adaptation et Evolution Moléculaires, UPMC, CNRS UMR 7144, Station Biologique, BP 74, Roscoff, France
    FEBS J 274:2641-52. 2007
  8. ncbi request reprint Gene structure and molecular phylogeny of the linker chains from the giant annelid hexagonal bilayer hemoglobins
    Christine Chabasse
    Equipe Ecophysiologie, Adaptation et Evolution Moleculaires, UPMC CNRS UMR 7144, Station Biologique, BP 74, 29682, Roscoff Cedex, France
    J Mol Evol 63:365-74. 2006
  9. pmc A phylogenomic profile of hemerythrins, the nonheme diiron binding respiratory proteins
    Xavier Bailly
    Station Biologique de Roscoff, 29680, Roscoff, France
    BMC Evol Biol 8:244. 2008
  10. ncbi request reprint The multigenic family of the extracellular hemoglobin from the annelid polychaete Arenicola marina
    Christine Chabasse
    Equipe Ecophysiologie Adaptation et Evolution Moléculaires, UPMC, CNRS UMR 7144, Station Biologique, BP 74, 29682 Roscoff Cedex, France
    Comp Biochem Physiol B Biochem Mol Biol 144:319-25. 2006

Collaborators

Detail Information

Publications24

  1. ncbi request reprint Development of a lab-made microarray for analyzing the genetic diversity of nitrogen fixing symbionts Sinorhizobium meliloti and Sinorhizobium medicae
    Xavier Bailly
    Laboratoire des Symbioses Tropicales et Méditerranéennes, UMR113 IRD INRA CIRAD UM2 Agro M, Campus International de Baillarguet, Montpellier F34398, France
    J Microbiol Methods 67:114-24. 2006
    ..Using this procedure, an uncharacterized population consisting of 33 S. meliloti/S. medicae isolates was successfully genotyped...
  2. pmc Myogenesis in the basal bilaterian Symsagittifera roscoffensis (Acoela)
    Henrike Semmler
    University of Copenhagen, Department of Biology, Research Group for Comparative Zoology, Universitetsparken 15, DK 2100 Copenhagen Ø, Denmark
    Front Zool 5:14. 2008
    ....
  3. pmc A phylogenomic profile of globins
    Serge N Vinogradov
    Department of Biochemistry and Molecular Biology, Wayne State University School of Medicine, Detroit, MI 48201, USA
    BMC Evol Biol 6:31. 2006
    ..The single-domain globins encompass sequences related to chimeric globins and "truncated" hemoglobins with a 2-over-2 instead of the canonical 3-over-3 alpha-helical fold...
  4. ncbi request reprint Evolution of the sulfide-binding function within the globin multigenic family of the deep-sea hydrothermal vent tubeworm Riftia pachyptila
    Xavier Bailly
    Station Biologique de Roscoff, UPR 9042 CNRS UPMC INSU, Laboratoire Ecophysiologie, Roscoff, France
    Mol Biol Evol 19:1421-33. 2002
    ..A likely scenario on the evolution of this multigenic family is proposed and discussed from this data set...
  5. pmc The loss of the hemoglobin H2S-binding function in annelids from sulfide-free habitats reveals molecular adaptation driven by Darwinian positive selection
    Xavier Bailly
    Equipe Evolution et Génétique des Populations Marines, Station Biologique de Roscoff, Unité Mixte de Recherche 7127, Centre National de la Recherche Scientifique, Universite Pierre et Marie Curie, 29680 Roscoff, France
    Proc Natl Acad Sci U S A 100:5885-90. 2003
    ....
  6. ncbi request reprint The sulfide binding function of annelid hemoglobins: relic of an old biosystem?
    Xavier Bailly
    Equipe Ecophysiologie, Station Biologique de Roscoff, Centre National de la Recherche Scientifique, Universite Pierre et Marie Curie, 29680 Roscoff, France
    J Inorg Biochem 99:142-50. 2005
    ..This proposal seems supported by the recent finding of "protoglobins" which also have a corresponding cysteine residue in Archea known to exist in hyperthermophilic and sulfide-rich environments...
  7. ncbi request reprint Globin gene family evolution and functional diversification in annelids
    Xavier Bailly
    Equipe Ecophysiologie Adaptation et Evolution Moléculaires, UPMC, CNRS UMR 7144, Station Biologique, BP 74, Roscoff, France
    FEBS J 274:2641-52. 2007
    ..It appears that it has the same intron position as in globin genes, suggesting a common ancestry with globins. In A. ornata, DHP may be a derived globin with an unusual enzymatic function...
  8. ncbi request reprint Gene structure and molecular phylogeny of the linker chains from the giant annelid hexagonal bilayer hemoglobins
    Christine Chabasse
    Equipe Ecophysiologie, Adaptation et Evolution Moleculaires, UPMC CNRS UMR 7144, Station Biologique, BP 74, 29682, Roscoff Cedex, France
    J Mol Evol 63:365-74. 2006
    ..We propose that the common gene ancestor to annelid linker genes exhibited a four-intron and five-exon structure and gave rise to the two families subsequent to a duplication event...
  9. pmc A phylogenomic profile of hemerythrins, the nonheme diiron binding respiratory proteins
    Xavier Bailly
    Station Biologique de Roscoff, 29680, Roscoff, France
    BMC Evol Biol 8:244. 2008
    ..Hemerythrins, are the non-heme, diiron binding respiratory proteins of brachiopods, priapulids and sipunculans; they are also found in annelids and bacteria, where their functions have not been fully elucidated...
  10. ncbi request reprint The multigenic family of the extracellular hemoglobin from the annelid polychaete Arenicola marina
    Christine Chabasse
    Equipe Ecophysiologie Adaptation et Evolution Moléculaires, UPMC, CNRS UMR 7144, Station Biologique, BP 74, 29682 Roscoff Cedex, France
    Comp Biochem Physiol B Biochem Mol Biol 144:319-25. 2006
    ..We discuss the unusual absence of these cysteines in the light of their invariant occurrence in the A2 subfamily of hemoglobins from annelids inhabiting sulfide-rich environments...
  11. ncbi request reprint Expression and localization of carbonic anhydrase and ATPases in the symbiotic tubeworm Riftia pachyptila
    Marie Cécile De Cian
    Equipe Ecophysiologie, CNRS UPMC UMR 7127 CEOBM, Station Biologique, BP 74, F 29682 Roscoff Cedex, France
    J Exp Biol 206:399-409. 2003
    ..In the trophosome lobules, cytosolic CA is expressed and found in bacteriocytes and peritoneal cells. Hypotheses on the role of CA in bicarbonate and CO(2) interconversion to fuel the symbiotic bacteria are discussed...
  12. pmc Plastid genomes of two brown algae, Ectocarpus siliculosus and Fucus vesiculosus: further insights on the evolution of red-algal derived plastids
    Gildas Le Corguillé
    CNRS, UMR7139, Marine Plants and Biomolecules, Station Biologique, Roscoff, France
    BMC Evol Biol 9:253. 2009
    ..Large-scale genomic analyses have shown to be a powerful tool for phylogenetic reconstruction but insufficient sequence data have been available for red-algal derived plastid genomes...
  13. ncbi request reprint Characterization of carbonic anhydrases from Riftia pachyptila, a symbiotic invertebrate from deep-sea hydrothermal vents
    Marie Cécile De Cian
    Equipe Ecophysiologie, CNRS UPMC UMR 7127 CEOBM, Station Biologique, Roscoff Cedex, France
    Proteins 51:327-39. 2003
    ..The physiologic roles of cytosolic CA in both tissues and supplementary membrane-bound CA isoform in the trophosome in the optimization of CO(2) transport and conversion are discussed...
  14. ncbi request reprint A model of globin evolution
    Serge N Vinogradov
    Department of Biochemistry and Molecular Biology, Wayne State University School of Medicine, Detroit, MI 48201, USA
    Gene 398:132-42. 2007
    ..The last stage encompassed the lateral gene transfers of some members of the three globin lineages to specific groups of Archaea and Eukaryotes...
  15. pmc Horizontal gene transfer and homologous recombination drive the evolution of the nitrogen-fixing symbionts of Medicago species
    Xavier Bailly
    Laboratoire des Symbioses Tropicales et Méditerranéennes, UMR 113 IRD Cirad Ensam UM2 USC INRA, Campus de Baillarguet, 34398 Montpellier Cedex 5, France
    J Bacteriol 189:5223-36. 2007
    ..meliloti, whereas reproductive isolation between S. meliloti bv. meliloti and S. medicae is maintained even though these bacteria can cooccur in sympatry on the same individual host plants...
  16. ncbi request reprint The lysozyme of the starfish Asterias rubens. A paradygmatic type i lysozyme
    Sana Bachali
    Equipe Developpement et Evolution, UMR 7622 Biologie du Développement, CNRS et Université P and M Curie, Paris, France
    Eur J Biochem 271:237-42. 2004
    ..In addition, we present a structural analysis that allows us to postulate upon the function of several conserved residues...
  17. pmc Three globin lineages belonging to two structural classes in genomes from the three kingdoms of life
    Serge N Vinogradov
    Department of Biochemistry and Molecular Biology, Wayne State University School of Medicine, Detroit, MI 48201, USA
    Proc Natl Acad Sci U S A 102:11385-9. 2005
    ..Furthermore, it appears likely that the predominant functions of globins are enzymatic and that oxygen transport is a specialized development that accompanied the evolution of metazoans...
  18. ncbi request reprint Phosphagen kinase of the giant tubeworm Riftia pachyptila. Cloning and expression of cytoplasmic and mitochondrial isoforms of taurocyamine kinase
    Kouji Uda
    Laboratory of Biochemistry, Faculty of Science, Kochi University, Kochi 780 8520, Japan
    Int J Biol Macromol 37:54-60. 2005
    ..2 s-1 mM-1). In Arenicola TKs, the mitochondrial form has seven-fold higher efficiency than the cytoplasmic form...
  19. ncbi request reprint Molecular evolution and phylogeny of sipunculan hemerythrins
    Stefano Vanin
    Department of Biology, University of Padova, Via Ugo Bassi 58 B, I 35131 Padova, Italy
    J Mol Evol 62:32-41. 2006
    ..We suggest that starting from a common gene ancestor, two distinct quaternary structures evolved in the sipunculan Hrs and this differentiation was probably favored by the acquisition of distinct physiological advantages...
  20. ncbi request reprint Nitrogen-fixing sinorhizobia with Medicago laciniata constitute a novel biovar (bv. medicaginis) of S. meliloti
    Maria Del Carmen Villegas
    Laboratoire des Symbioses Tropicales et Méditerranéennes Cirad Ensa M Ird UmII, TA10 J, Campus International de Baillarguet, 34 398 Montpellier Cedex 5, France
    Syst Appl Microbiol 29:526-38. 2006
    ..meliloti: bv. medicaginis for Sinorhizobium efficient on M. laciniata and bv. meliloti for the classically known S. meliloti group represented by the strains ATCC9930(T) and RCR 2011 efficient on M. sativa...
  21. ncbi request reprint Recombination and selection shape the molecular diversity pattern of nitrogen-fixing Sinorhizobium sp. associated to Medicago
    Xavier Bailly
    Laboratoire des Symbioses Tropicales et Méditerranéennes, UMR 113 IRD Cirad Ensam UM2 USC INRA, Campus International de Baillarguet, 34398 Montpellier Cedex 5, France
    Mol Ecol 15:2719-34. 2006
    ..Thus, recombination may play an important role in resolving this conflict by allowing different selection patterns at different loci...
  22. pmc New analysis for consistency among markers in the study of genetic diversity: development and application to the description of bacterial diversity
    Sandrine Pavoine
    Unité de Conservation des espèces, restauration et suivi des populations UMR MNHN UPMC CNRS 5173, Museum national d histoire naturelle, 55 rue Buffon, 75005 Paris, France
    BMC Evol Biol 7:156. 2007
    ....
  23. ncbi request reprint Conceptual bases for quantifying the role of the environment on gene evolution: the participation of positive selection and neutral evolution
    Anthony Levasseur
    Phylogenomics Laboratory, EA 3781 Evolution Biologique Université de Provence, Case 19, Pl V Hugo, 13331 Marseille Cedex 03, France
    Biol Rev Camb Philos Soc 82:551-72. 2007
    ..Therefore, the second aim herein is to review evidence for the mechanisms leading to fixation...
  24. pmc Nickel resistance determinants in bradyrhizobium strains from nodules of the endemic New Caledonia legume Serianthes calycina
    Clémence Chaintreuil
    LSTM, Campus International de Baillarguet, TA A 82 J, 34398 Montpellier Cedex 5, France
    Appl Environ Microbiol 73:8018-22. 2007
    ..The genomes of these strains harbored two Ni resistance determinants, the cnr and nre operons. By constructing a cnrA mutant, we demonstrated that the cnr operon determines the high nickel resistance in Bradyrhizobium strains...