- RRTree: relative-rate tests between groups of sequences on a phylogenetic treeM Robinson-Rechavi
Department of Zoology, Tel Aviv University, Ramat Aviv 69978, Israel Institut des Sciences de l Evolution, UniversitéMontpellier 2, 34095 Montpellier, France
Bioinformatics 16:296-7. 2000..Genetic diversity is taken into account through use of several sequences, and phylogenetic relations are integrated by topological weighting...
- Euteleost fish genomes are characterized by expansion of gene familiesM Robinson-Rechavi
Centre National pour la Recherche Scientifique UMR 5665, Laboratoire de Biologie Moleculaire et Cellulaire, Ecole Normale Superieure de Lyon, 46 Alleé d Italie 69364 LYON Cedex 07, France
Genome Res 11:781-8. 2001..Redundancy appears to be the rule in fish developmental genetics. Finally, our results imply that the outcome of genome projects cannot be extrapolated easily between fish species...
- Characterization of oestrogen receptors in zebrafish (Danio rerio)P L Bardet
Laboratoire de Biologie Moleculaire et Cellulaire, CNRS UMR 5665, Ecole Normale Superieure de Lyon, 46 allee d Italie, 69364 Lyon, France
J Mol Endocrinol 28:153-63. 2002..After 48 h after fertilization, all ERs, but predominantly ER alpha, began to be expressed. We conclude that oestrogen signal transduction can operate during zebrafish development only within discrete time windows...
- Evidence for two distinct functional glucocorticoid receptors in teleost fishN R Bury
INRA SCRIBE, Campus de Beaulieu, 35042 Rennes Cedex, France
J Mol Endocrinol 31:141-56. 2003..Altogether, these results indicate that these two GR sequences encode for two functionally distinct GRs acting as ligand-inducible transcription factors in rainbow trout...
- A conserved retinoid X receptor (RXR) from the mollusk Biomphalaria glabrata transactivates transcription in the presence of retinoidsD Bouton
INSERM U 547, Institut Pasteur, 1 rue du Professeur Calmette, 59019 Lille, France
J Mol Endocrinol 34:567-82. 2005..The nucleotide sequence reported in this paper has been submitted to the GenBank/EBI Data Bank with accession no. AY048663...
- One billion years of bZIP transcription factor evolution: conservation and change in dimerization and DNA-binding site specificityG D Amoutzias
Faculty of Life Sciences, University of Manchester, United Kingdom
Mol Biol Evol 24:827-35. 2007..In conclusion, the bZIPs are an excellent model with which to understand how DNA binding and protein interactions of TFs evolved during animal evolution...