Philippe Normand

Summary

Country: France

Publications

  1. ncbi Geodermatophilaceae fam. nov., a formal description
    Philippe Normand
    UMR 5557 CNRS Ecologie Microbienne, IFR41 Bio Environnement et Santé, Universite Lyon 1, 43 Bd du 11 Novembre 1918, 69622 Villeurbanne Cedex, France
    Int J Syst Evol Microbiol 56:2277-8. 2006
  2. ncbi Paenibacillus graminis sp. nov. and Paenibacillus odorifer sp. nov., isolated from plant roots, soil and food
    Odile Berge
    CEA Cadarache, DSV DEVM, Laboratoire d Ecologie Microbienne de la Rhizosphere, UMR 163 CNRS CEA, Saint Paul lez Durance, France
    Int J Syst Evol Microbiol 52:607-16. 2002
  3. pmc Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography
    Philippe Normand
    Universite de Lyon, UMR CNRS, 5557 Ecologie Microbienne, IFR41 Bio Environnement et Santé, Université Lyon I, Villeurbanne 69622 Cedex, France
    Genome Res 17:7-15. 2007
  4. pmc Comparative secretome analysis suggests low plant cell wall degrading capacity in Frankia symbionts
    Juliana E Mastronunzio
    Department of Molecular and Cell Biology, U 3125, University of Connecticut, Storrs, CT, USA
    BMC Genomics 9:47. 2008
  5. pmc On the nature of fur evolution: a phylogenetic approach in Actinobacteria
    Catarina L Santos
    IBMC Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua do Campo Alegre, 823, 4150 180 Porto, Portugal
    BMC Evol Biol 8:185. 2008
  6. ncbi Effect of carbon and nitrogen input on the bacterial community structure of Neocaledonian nickel mine spoils
    Marina Héry
    Ecologie Microbienne UMR CNRS 5557, Universite Claude Bernard Lyon I, Batiment Mendel, 43 Bd du 11 Novembre 1918, F 69622 Villeurbanne Cedex, France
    FEMS Microbiol Ecol 51:333-40. 2005
  7. doi Lectin genes in the Frankia alni genome
    Petar Pujic
    Ecologie Microbienne, UMR5557 CNRS, Universite Lyon, Université Lyon1, 16 rue Dubois, 69622 Villeurbanne Cedex, France
    Arch Microbiol 194:47-56. 2012
  8. doi The Frankia alni symbiotic transcriptome
    Nicole Alloisio
    Universite de Lyon, Lyon, France
    Mol Plant Microbe Interact 23:593-607. 2010
  9. ncbi Molecular phylogeny of Myricaceae: a reexamination of host-symbiont specificity
    Valérie Huguet
    Ecologie Microbienne, UMR CNRS 5557, Universite Claude Bernard Lyon 1, 69622 Villeurbanne Cedex, France
    Mol Phylogenet Evol 34:557-68. 2005
  10. pmc Genome sequence of radiation-resistant Modestobacter marinus strain BC501, a representative actinobacterium that thrives on calcareous stone surfaces
    Philippe Normand
    Universite Lyon 1, Universite de Lyon, CNRS, Ecologie Microbienne UMR5557, Villeurbanne, France
    J Bacteriol 194:4773-4. 2012

Collaborators

Detail Information

Publications23

  1. ncbi Geodermatophilaceae fam. nov., a formal description
    Philippe Normand
    UMR 5557 CNRS Ecologie Microbienne, IFR41 Bio Environnement et Santé, Universite Lyon 1, 43 Bd du 11 Novembre 1918, 69622 Villeurbanne Cedex, France
    Int J Syst Evol Microbiol 56:2277-8. 2006
    ..2000). We hereby formally describe the family 'Geodermatophilaceae' which includes the recently described genus Modestobacter. The type genus of the family is Geodermatophilus...
  2. ncbi Paenibacillus graminis sp. nov. and Paenibacillus odorifer sp. nov., isolated from plant roots, soil and food
    Odile Berge
    CEA Cadarache, DSV DEVM, Laboratoire d Ecologie Microbienne de la Rhizosphere, UMR 163 CNRS CEA, Saint Paul lez Durance, France
    Int J Syst Evol Microbiol 52:607-16. 2002
    ..nov. (type strain RSA19T = ATCC BAA-95T = LMG 19080T) and Paenibacillus odorifer sp. nov. (type strain TOD45T = ATCC BAA-93T = LMG 19079T) are proposed...
  3. pmc Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography
    Philippe Normand
    Universite de Lyon, UMR CNRS, 5557 Ecologie Microbienne, IFR41 Bio Environnement et Santé, Université Lyon I, Villeurbanne 69622 Cedex, France
    Genome Res 17:7-15. 2007
    ..The results support the idea that major genome expansions as well as reductions can occur in facultative symbiotic soil bacteria as they respond to new environments in the context of their symbioses...
  4. pmc Comparative secretome analysis suggests low plant cell wall degrading capacity in Frankia symbionts
    Juliana E Mastronunzio
    Department of Molecular and Cell Biology, U 3125, University of Connecticut, Storrs, CT, USA
    BMC Genomics 9:47. 2008
    ..Proteins in the core secretome may be involved in the actinorhizal symbiosis...
  5. pmc On the nature of fur evolution: a phylogenetic approach in Actinobacteria
    Catarina L Santos
    IBMC Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua do Campo Alegre, 823, 4150 180 Porto, Portugal
    BMC Evol Biol 8:185. 2008
    ....
  6. ncbi Effect of carbon and nitrogen input on the bacterial community structure of Neocaledonian nickel mine spoils
    Marina Héry
    Ecologie Microbienne UMR CNRS 5557, Universite Claude Bernard Lyon I, Batiment Mendel, 43 Bd du 11 Novembre 1918, F 69622 Villeurbanne Cedex, France
    FEMS Microbiol Ecol 51:333-40. 2005
    ..This was observed only in the mine spoils and is probably a consequence of the extreme environmental conditions. Carbon amendment in the agricultural soil led to an increase in Firmicutes, mainly Bacillus sp...
  7. doi Lectin genes in the Frankia alni genome
    Petar Pujic
    Ecologie Microbienne, UMR5557 CNRS, Universite Lyon, Université Lyon1, 16 rue Dubois, 69622 Villeurbanne Cedex, France
    Arch Microbiol 194:47-56. 2012
    ..glutinosa, resulting in a higher number of nodules per root. Its role could thus be to permit binding of microbial cells to root hairs and help symbiosis to occur under conditions of low Frankia cell counts such as in pioneer situations...
  8. doi The Frankia alni symbiotic transcriptome
    Nicole Alloisio
    Universite de Lyon, Lyon, France
    Mol Plant Microbe Interact 23:593-607. 2010
    ..Finally, comparison with rhizobia transcriptome suggested that F. alni is metabolically more active in symbiosis than rhizobia...
  9. ncbi Molecular phylogeny of Myricaceae: a reexamination of host-symbiont specificity
    Valérie Huguet
    Ecologie Microbienne, UMR CNRS 5557, Universite Claude Bernard Lyon 1, 69622 Villeurbanne Cedex, France
    Mol Phylogenet Evol 34:557-68. 2005
    ....
  10. pmc Genome sequence of radiation-resistant Modestobacter marinus strain BC501, a representative actinobacterium that thrives on calcareous stone surfaces
    Philippe Normand
    Universite Lyon 1, Universite de Lyon, CNRS, Ecologie Microbienne UMR5557, Villeurbanne, France
    J Bacteriol 194:4773-4. 2012
    ..The generated chromosome is circular, with a length of 5.57 Mb and a G+C content of 74.13%, containing 5,445 protein-coding genes, 48 tRNAs, and 3 ribosomal operons...
  11. pmc Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments
    Florence Wisniewski-Dyé
    CNRS, UMR 5557, Ecologie Microbienne, Universite de Lyon, Villeurbanne, France
    PLoS Genet 7:e1002430. 2011
    ..The birth of the genus Azospirillum approximately coincided with the emergence of vascular plants on land...
  12. pmc Genome sequence of the human- and animal-pathogenic strain Nocardia cyriacigeorgica GUH-2
    Anthony Zoropogui
    Universite de Lyon, Research Group on Bacterial Opportunistic Pathogens and Environment, Biological Resource Center, UMR5557 Ecologie Microbienne, CNRS, VetAgro Sup Veterinary Campus, Lyon, France
    J Bacteriol 194:2098-9. 2012
    ..The complete genomic sequence of this strain contains 6,194,645 bp, an average G+C content of 68.37%, and no plasmids. We also identified several protein-coding genes to which N. cyriacigeorgica's virulence can potentially be attributed...
  13. ncbi Construction of a recA mutant of Azospirillum lipoferum and involvement of recA in phase variation
    Ludovic Vial
    UMR CNRS 5557 Ecologie Microbienne, Universite Claude Bernard Lyon1, 43 Bd du 11 Novembre 1918, 69622 Villeurbanne, France
    FEMS Microbiol Lett 236:291-9. 2004
    ..So, in contrast with many studies showing the abolition or a large reduction of the frequency of phase variation in recA mutants, this study describes an enhancement of phase variation in the absence of a functional recA...
  14. ncbi Micromonospora is a normal occupant of actinorhizal nodules
    Lorena Carro
    Universite Lyon 1, Universite de Lyon, CNRS, Ecologie Microbienne UMR5557, Villeurbanne 69622 Cedex, France
    J Biosci 38:685-93. 2013
    ..Micromonospora isolates were found to inhibit some Frankia strains and to be innocuous to other strains...
  15. ncbi Adaptation to nickel spiking of bacterial communities in neocaledonian soils
    Marina Héry
    Ecologie Microbienne, UMR CNRS 5557, Université Lyon I, Batiment Mendel, 43 Bd du 11 Novembre 1918, F 69622 Villeurbanne Cedex, France
    Environ Microbiol 5:3-12. 2003
    ..These results suggest that neocaledonian soil bacteria are particularly well adapted to nickel...
  16. ncbi Presence of Hydrogenophilus thermoluteolus DNA in accretion ice in the subglacial Lake Vostok, Antarctica, assessed using rrs, cbb and hox
    Celine Lavire
    UMR CNRS 5557 Ecologie Microbienne, IFR41 Bio Environnement et Santé, Universite Lyon 1, 43 Bd du 11 Novembre 1918, 69622 Villeurbanne Cedex, France
    Environ Microbiol 8:2106-14. 2006
    ..They presumably originate from deep faults in the bedrock cavity containing the lake in which episodes of seismotectonic activity would release debris along with microbial cells...
  17. pmc Recombinant environmental libraries provide access to microbial diversity for drug discovery from natural products
    Sophie Courtois
    Laboratoire d Ecologie Microbienne du Sol, UMR CNRS 5557, Universite Claude Bernard Lyon 1, 69622 Villeurbanne Cedex, France
    Appl Environ Microbiol 69:49-55. 2003
    ....
  18. ncbi Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia
    Eric Giraud
    Institut de Recherche pour le Developpement, Centre de Coopération International en Recherche Agronomique pour le Développement, Institut National de la Recherche Agronomique, Universite Montpellier 2, France
    Science 316:1307-12. 2007
    ..Mutational analyses indicated that these unique rhizobia use an alternative pathway to initiate symbioses, where a purine derivative may play a key role in triggering nodule formation...
  19. ncbi DNA-DNA hybridization study of Burkholderia species using genomic DNA macro-array analysis coupled to reverse genome probing
    Vincent Ramisse
    Centre d Etudes du Bouchet CEB, BP3, 91710 Vert le Petit, France
    Int J Syst Evol Microbiol 53:739-46. 2003
    ..As part of a polyphasic taxonomic scheme, this straightforward approach is proposed to improve species definition, especially for application in the rapid screening necessary for large numbers of clinical or environmental isolates...
  20. ncbi Characterization of the sodF gene region of Frankia sp. strain ACN14a and complementation of Escherichia coli sod mutant
    Joelle Marechal
    Ecologie Microbienne, Unite Mixte de Recherche, Centre National de la Recherche Scientifique, Universite Claude Bernard Lyon, Villeaurbanne CEDEX, France
    Can J Microbiol 49:294-300. 2003
    ..Thus, the SodF protein induced in Frankia by root exudates is an iron-containing enzyme similar to the one present in the nodules...
  21. pmc Non-Frankia actinomycetes isolated from surface-sterilized roots of Casuarina equisetifolia fix nitrogen
    María Valdés
    Departamento de Microbiologia, Escuela Nacional de Ciencias Biologicas, I P N, Plan De Ayala y Carpio, Mexico
    Appl Environ Microbiol 71:460-6. 2005
    ..An analysis of complete 16S rRNA gene sequences demonstrated that the two strains analyzed in detail are most closely related to actinobacteria in the Thermomonosporaceae and the Micromonosporaceae...
  22. doi The implication of life style on codon usage patterns and predicted highly expressed genes for three Frankia genomes
    Arnab Sen
    Department of Microbiology, University of New Hampshire, Durham, NH 03824 2617, USA
    Antonie Van Leeuwenhoek 93:335-46. 2008
    ..These results support the hypothesis that strain CcI3 is becoming a symbiotic specialist and the other two facultative symbiotic strains are maintaining their capacity to exist as free-living soil dwellers...
  23. doi Advances in environmental genomics: towards an integrated view of micro-organisms and ecosystems
    Philippe N Bertin
    Genetique Moleculaire, Génomique et Microbiologie, Universite Louis Pasteur, UMR7156 CNRS, Strasbourg, France
    Microbiology 154:347-59. 2008
    ..Combined with classical methods of physico-chemistry and microbiology, these endeavours should provide us with an integrated view of how micro-organisms adapt to particular ecological niches and participate in the dynamics of ecosystems...